CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY05492	Canola	mitochondrion	100.0	100.0
CDY05350	Canola	mitochondrion	76.26	86.18
Bra020499.1-P	Field mustard	mitochondrion	75.54	85.37
AT5G25450.1	Thale cress	mitochondrion	68.35	77.87
CDY39888	Canola	mitochondrion	66.91	76.23
CDY23327	Canola	mitochondrion	65.47	74.59
CDX68850	Canola	mitochondrion	63.31	72.13
CDX75248	Canola	mitochondrion	63.31	72.13
VIT_04s0008g05000.t01	Wine grape	cytosol	62.59	71.31
GSMUA_Achr1P13480_001	Banana	mitochondrion	60.43	68.29
KRH16011	Soybean	mitochondrion	58.99	67.21
KRH05106	Soybean	endoplasmic reticulum, mitochondrion	58.27	66.39
Zm00001d005114_P001	Maize	mitochondrion	57.55	65.04
TraesCS5A01G456800.1	Wheat	golgi, mitochondrion, unclear	56.83	64.23
GSMUA_Achr9P07800_001	Banana	mitochondrion	56.12	63.41
EER96047	Sorghum	mitochondrion	56.12	63.41
Zm00001d034528_P001	Maize	mitochondrion	56.83	62.7
Os03t0806900-01	Rice	mitochondrion	56.12	61.9
KXG37312	Sorghum	mitochondrion	53.96	59.52
Os08t0246400-01	Rice	mitochondrion	46.04	50.39
Os07t0205000-01	Rice	mitochondrion	58.27	46.29
HORVU5Hr1G109620.2	Barley	plastid	48.2	42.68
Zm00001d013041_P003	Maize	mitochondrion	57.55	34.19

Protein Annotations

Gene3D:1.10.1090.10	MapMan:2.4.3.6	GO:A0A078JVP3	UniProt:A0A078JVP3	EnsemblPlants:CDY70525	ProteinID:CDY70525
ProteinID:CDY70525.1	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739
GO:GO:0005750	GO:GO:0006091	GO:GO:0006122	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016020	EnsemblPlantsGene:GSBRNA2T00004143001	InterPro:IPR036544	PFAM:PD008153	PFAM:PF02271
PANTHER:PTHR12022	InterPro:QCR7	InterPro:QCR7_sf	SUPFAM:SSF81524	UniParc:UPI0004EEF50F	SEG:seg

Description

BnaAnng34010DBnaA02g31990D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JVP3]

Coordinates

chrLK042385:-:93..733

Molecular Weight (calculated)

16532.5 Da

IEP (calculated)

9.941

GRAVY (calculated)

-0.314

Length

139 amino acids

Sequence
(BLAST)

001: MASSFLQRLV DPKKNFLARL HMKSVSNRLR KYGLRYDDLY DPMYDLDIKE ALNRLPREVV DARNQRLKRA MDLSMKHEYL PDDLQAVQTP FRSYLQEMLA
101: LVSRMQVLVI TKKELVQLCF SLKPPDVYLI RTTIHTLWC

Best Arabidopsis Sequence Match ( AT4G32470.2 )
(BLAST)

001: MASLLKAFID PKKNFLARMH MKAISTRLRR YGLRYDDLYD QYYSMDIKEA MNRLPREVVD ARNQRLKRAM DLSMKHEYLP KDLQAVQTPF RGYLQDMLAL
101: G

Arabidopsis Description

QCR7-1Cytochrome b-c1 complex subunit 7-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUU5]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.