Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 1
- cytosol 1
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra011350.1-P | Field mustard | mitochondrion | 82.79 | 97.12 |
| CDX75248 | Canola | mitochondrion | 96.72 | 96.72 |
| CDY39888 | Canola | mitochondrion | 90.98 | 90.98 |
| CDY23327 | Canola | mitochondrion | 90.16 | 90.16 |
| AT4G32470.1 | Thale cress | mitochondrion | 86.89 | 86.89 |
| CDY05350 | Canola | mitochondrion | 82.79 | 82.11 |
| Solyc08g067020.2.1 | Tomato | plastid | 74.59 | 73.98 |
| PGSC0003DMT400074807 | Potato | mitochondrion | 74.59 | 73.98 |
| KRH05106 | Soybean | endoplasmic reticulum, mitochondrion | 71.31 | 71.31 |
| KRH16011 | Soybean | mitochondrion | 71.31 | 71.31 |
| GSMUA_Achr1P13480_001 | Banana | mitochondrion | 70.49 | 69.92 |
| Zm00001d005114_P001 | Maize | mitochondrion | 70.49 | 69.92 |
| Zm00001d034528_P001 | Maize | mitochondrion | 72.13 | 69.84 |
| EER96047 | Sorghum | mitochondrion | 69.67 | 69.11 |
| KXG37312 | Sorghum | mitochondrion | 70.49 | 68.25 |
| GSMUA_Achr9P07800_001 | Banana | mitochondrion | 68.03 | 67.48 |
| Os03t0806900-01 | Rice | mitochondrion | 68.85 | 66.67 |
| TraesCS5A01G456800.1 | Wheat | golgi, mitochondrion, unclear | 66.39 | 65.85 |
| CDY70525 | Canola | mitochondrion | 72.13 | 63.31 |
| CDY05492 | Canola | mitochondrion | 72.13 | 63.31 |
| Os08t0246400-01 | Rice | mitochondrion | 53.28 | 51.18 |
| Os07t0205000-01 | Rice | mitochondrion | 72.95 | 50.86 |
| HORVU5Hr1G109620.2 | Barley | plastid | 53.28 | 41.4 |
| Zm00001d013041_P003 | Maize | mitochondrion | 72.95 | 38.03 |
Protein Annotations
| Gene3D:1.10.1090.10 | MapMan:2.4.3.6 | GO:A0A078BVM0 | EnsemblPlants:CDX68850 | ProteinID:CDX68850 | ProteinID:CDX68850.1 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0005750 |
| GO:GO:0006091 | GO:GO:0006122 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016020 | EnsemblPlantsGene:GSBRNA2T00130574001 | InterPro:IPR036544 | PFAM:PD008153 | PFAM:PF02271 | PIRSF:PIRSF000022 |
| PANTHER:PTHR12022 | InterPro:QCR7 | InterPro:QCR7_sf | SUPFAM:SSF81524 | UniParc:UPI0004EEBE4F | SEG:seg |
Description
BnaC01g06030D
Coordinates
chrLK031789:-:1564996..1566318
Molecular Weight (calculated)
14575.8 Da
IEP (calculated)
9.882
GRAVY (calculated)
-0.669
Length
122 amino acids
Sequence
(BLAST)
(BLAST)
001: MSTFLQSLID PKKNFLARMH MNAVSTRLRR YGLRYDDLFD QYETMDIKEA LNRLPREVVD ARNQRLKRAM DLSMKHEYLP EDLQAVQTPF RGYLKEMLAL
101: VERERKEREA LGALPLYQRT LP
101: VERERKEREA LGALPLYQRT LP
001: MASLLKAFID PKKNFLARMH MKAISTRLRR YGLRYDDLYD QYYSMDIKEA MNRLPREVVD ARNQRLKRAM DLSMKHEYLP KDLQAVQTPF RGYLQDMLAL
101: VERESKEREA LGALPLYQRT LP
101: VERESKEREA LGALPLYQRT LP
Arabidopsis Description
QCR7-1Cytochrome b-c1 complex subunit 7-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUU5]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.