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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • nucleus 1
  • mitochondrion 7
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os03t0806900-01 Rice mitochondrion 80.16 80.16
EER96047 Sorghum mitochondrion 77.78 79.67
TraesCS5A01G456800.1 Wheat golgi, mitochondrion, unclear 75.4 77.24
Bra011350.1-P Field mustard mitochondrion 61.9 75.0
GSMUA_Achr1P13480_001 Banana mitochondrion 70.63 72.36
CDY05350 Canola mitochondrion 70.63 72.36
VIT_04s0008g05000.t01 Wine grape cytosol 69.84 72.13
Bra020499.1-P Field mustard mitochondrion 69.84 71.54
AT5G25450.1 Thale cress mitochondrion 69.05 71.31
PGSC0003DMT400074807 Potato mitochondrion 69.05 70.73
Solyc08g067020.2.1 Tomato plastid 69.05 70.73
CDX75248 Canola mitochondrion 68.25 70.49
CDX68850 Canola mitochondrion 68.25 70.49
GSMUA_Achr9P07800_001 Banana mitochondrion 68.25 69.92
AT4G32470.1 Thale cress mitochondrion 67.46 69.67
CDY39888 Canola mitochondrion 66.67 68.85
CDY23327 Canola mitochondrion 65.87 68.03
Bra040079.1-P Field mustard mitochondrion 65.87 68.03
KRH16011 Soybean mitochondrion 64.29 66.39
KRH05106 Soybean endoplasmic reticulum, mitochondrion 62.7 64.75
CDY70525 Canola mitochondrion 59.52 53.96
CDY05492 Canola mitochondrion 59.52 53.96
Zm00001d013041_P003 Maize mitochondrion 94.44 50.85
HORVU5Hr1G109620.2 Barley plastid 60.32 48.41
Protein Annotations
Gene3D:1.10.1090.10MapMan:2.4.3.6UniProt:A0A1B6QHB6GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005737GO:GO:0005739GO:GO:0005743GO:GO:0005750GO:GO:0006091GO:GO:0006122
GO:GO:0006139GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016020GO:GO:0055114
GO:GO:0070469InterPro:IPR036544EnsemblPlants:KXG37312ProteinID:KXG37312ProteinID:KXG37312.1PFAM:PD008153
PFAM:PF02271PIRSF:PIRSF000022PANTHER:PTHR12022InterPro:QCR7InterPro:QCR7_sfEnsemblPlantsGene:SORBI_3001G047800
SUPFAM:SSF81524UniParc:UPI0001C80CA4::::
Description
hypothetical protein
Coordinates
chr1:-:3509307..3512156
Molecular Weight (calculated)
14778.1 Da
IEP (calculated)
10.177
GRAVY (calculated)
-0.484
Length
126 amino acids
Sequence
(BLAST)
001: MSSMMNALAN WLVNPRRNPL ARLHMHAVSS RLRKYGLRYD DLYDPYFDVE IKEALGRLPR EVIDARIQRL KRAMDLSMKH QYLPEHVQAQ QVPFRGYLSD
101: MLALVKKENA EREALGALPL YQRTLP
Best Arabidopsis Sequence Match ( AT5G25450.1 )
(BLAST)
001: MASFLQRLVD PRKNFLARMH MKSVSNRLRR YGLRYDDLYD PLYDLDIKEA LNRLPREIVD ARNQRLMRAM DLSMKHEYLP DNLQAVQTPF RSYLQDMLAL
101: VKRERAEREA LGALPLYQRT IP
Arabidopsis Description
QCR7-2Cytochrome b-c1 complex subunit 7 [Source:UniProtKB/TrEMBL;Acc:A0A178UDJ6]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.