Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 4
- cytosol 2
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDX94243 | Canola | cytosol | 40.8 | 18.68 |
CDY27619 | Canola | nucleus | 64.0 | 12.14 |
CDY56191 | Canola | cytosol | 64.0 | 11.24 |
KRH03299 | Soybean | cytosol | 35.2 | 11.03 |
CDX90788 | Canola | plastid | 49.6 | 10.23 |
CDY05122 | Canola | plastid | 49.6 | 10.21 |
GSMUA_Achr10P... | Banana | cytosol | 53.6 | 10.15 |
CDX86457 | Canola | cytosol | 52.8 | 9.94 |
CDY58518 | Canola | cytosol | 52.0 | 9.89 |
HORVU6Hr1G069310.1 | Barley | cytosol | 54.4 | 9.6 |
TraesCS6A01G274500.1 | Wheat | cytosol | 54.4 | 9.59 |
TraesCS6B01G302000.1 | Wheat | cytosol | 54.4 | 9.58 |
TraesCS6D01G254800.1 | Wheat | cytosol | 54.4 | 9.58 |
Os02t0708400-01 | Rice | plasma membrane | 54.4 | 9.56 |
Zm00001d017793_P001 | Maize | cytosol | 54.4 | 9.54 |
EES05647 | Sorghum | cytosol | 54.4 | 9.54 |
Zm00001d051589_P001 | Maize | cytosol | 54.4 | 9.54 |
VIT_17s0000g08260.t01 | Wine grape | cytosol | 54.4 | 9.21 |
PGSC0003DMT400062960 | Potato | cytosol | 53.6 | 9.18 |
Solyc03g114320.2.1 | Tomato | cytosol | 53.6 | 9.18 |
KRH63534 | Soybean | nucleus | 52.8 | 9.09 |
KRH57064 | Soybean | cytosol | 52.8 | 9.04 |
GSMUA_Achr2P09630_001 | Banana | nucleus | 50.4 | 8.81 |
KRH54405 | Soybean | cytosol | 52.0 | 8.63 |
CDY15411 | Canola | mitochondrion | 20.0 | 4.11 |
CDY19069 | Canola | mitochondrion | 20.0 | 4.06 |
Protein Annotations
EnsemblPlants:CDX90092 | EnsemblPlantsGene:GSBRNA2T00150608001 | Gene3D:1.25.40.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
InterPro:IPR011990 | InterPro:TPR-like_helical_dom_sf | PANTHER:PTHR19959 | PANTHER:PTHR19959:SF156 | PFAM:PF13374 | PFscan:PS51257 |
ProteinID:CDX90092 | ProteinID:CDX90092.1 | SEG:seg | SUPFAM:SSF48452 | UniParc:UPI0004EE5EFA | MapMan:35.1 |
Description
BnaA08g18920D
Coordinates
chrLK031862:-:25340..25848
Molecular Weight (calculated)
13669.3 Da
IEP (calculated)
4.270
GRAVY (calculated)
-0.121
Length
125 amino acids
Sequence
(BLAST)
(BLAST)
001: MTAQYQRAWQ HQRGGRKMFL GIALNQMGLA CVQIDEIEEG VELSEEAKCV LEQECGIYHA ETLGVYNNLA GAYDAIGRLE DAIVLVGHVV GAREEKLGTA
101: NLDTEEEKGR LTLIDSDLLT SSALC
101: NLDTEEEKGR LTLIDSDLLT SSALC
001: MEGGSVNESH SNADQMFDTT IEELCKNLCE LQSSNQSPSR QSFGSYGDES KIDSDLQHLA LGEMRDIDIL EDEGDEDEVA KPEEFDVKSN SSNLDLEVMP
101: RDMEKQTGKK NVTKSNVGVG GMRKKKVGGT KLQNGNEEPS SENVELARFL LNQARNLVSS GDSTHKALEL THRAAKLFEA SAENGKPCLE WIMCLHVTAA
201: VHCKLKEYNE AIPVLQRSVE IPVVEEGEEH ALAKFAGLMQ LGDTYAMVGQ LESSISCYTE GLNIQKKVLG ENDPRVGETC RYLAEALVQA LRFDEAQQVC
301: ETALSIHRES GLPGSIAEAA DRRLMGLICE TKGDHENALE HLVLASMAMA ANGQESEVAF VDTSIGDSYL SLSRFDEAIC AYQKSLTALK TAKGENHPAV
401: GSVYIRLADL YNRTGKVREA KSYCENALRI YESHNLEISP EEIASGLTDI SVICESMNEV EQAITLLQKA LKIYADSPGQ KIMIAGIEAQ MGVLYYMMGK
501: YMESYNTFKS AISKLRATGK KQSTFFGIAL NQMGLACIQL DAIEEAVELF EEAKCILEQE CGPYHPETLG LYSNLAGAYD AIGRLDDAIK LLGHVVGVRE
601: EKLGTANPVT EDEKRRLAQL LKEAGNVTGR KAKSLKTLID SDLTSSSALR
101: RDMEKQTGKK NVTKSNVGVG GMRKKKVGGT KLQNGNEEPS SENVELARFL LNQARNLVSS GDSTHKALEL THRAAKLFEA SAENGKPCLE WIMCLHVTAA
201: VHCKLKEYNE AIPVLQRSVE IPVVEEGEEH ALAKFAGLMQ LGDTYAMVGQ LESSISCYTE GLNIQKKVLG ENDPRVGETC RYLAEALVQA LRFDEAQQVC
301: ETALSIHRES GLPGSIAEAA DRRLMGLICE TKGDHENALE HLVLASMAMA ANGQESEVAF VDTSIGDSYL SLSRFDEAIC AYQKSLTALK TAKGENHPAV
401: GSVYIRLADL YNRTGKVREA KSYCENALRI YESHNLEISP EEIASGLTDI SVICESMNEV EQAITLLQKA LKIYADSPGQ KIMIAGIEAQ MGVLYYMMGK
501: YMESYNTFKS AISKLRATGK KQSTFFGIAL NQMGLACIQL DAIEEAVELF EEAKCILEQE CGPYHPETLG LYSNLAGAYD AIGRLDDAIK LLGHVVGVRE
601: EKLGTANPVT EDEKRRLAQL LKEAGNVTGR KAKSLKTLID SDLTSSSALR
Arabidopsis Description
Tetratricopeptide repeat (TPR)-like superfamily protein [Source:TAIR;Acc:AT1G27500]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.