CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH63534	Soybean	nucleus	88.05	91.32
VIT_17s0000g08260.t01	Wine grape	cytosol	67.73	69.11
Solyc03g114320.2.1	Tomato	cytosol	65.21	67.26
PGSC0003DMT400062960	Potato	cytosol	64.81	66.85
GSMUA_Achr10P...	Banana	cytosol	56.71	64.7
KRH57064	Soybean	cytosol	60.42	62.33
Zm00001d051589_P001	Maize	cytosol	58.43	61.71
EES05647	Sorghum	cytosol	58.43	61.71
Os02t0708400-01	Rice	plasma membrane	57.37	60.76
TraesCS6A01G274500.1	Wheat	cytosol	56.97	60.51
TraesCS6B01G302000.1	Wheat	cytosol	56.97	60.42
HORVU6Hr1G069310.1	Barley	cytosol	56.71	60.31
Bra032832.1-P	Field mustard	nucleus	52.72	60.24
CDY27619	Canola	nucleus	52.72	60.24
TraesCS6D01G254800.1	Wheat	cytosol	56.71	60.14
Zm00001d017793_P001	Maize	cytosol	56.84	60.03
GSMUA_Achr2P09630_001	Banana	nucleus	56.71	59.72
KRH56614	Soybean	cytosol	55.64	59.69
AT1G27500.2	Thale cress	cytosol	52.32	59.61
KRH06445	Soybean	cytosol	43.16	58.66
KRH60081	Soybean	nucleus	43.69	58.44
KRG93305	Soybean	cytosol	54.05	58.14
KRH41360	Soybean	nucleus	43.96	57.27
CDY56191	Canola	cytosol	53.65	56.74
CDX90092	Canola	cytosol, mitochondrion	8.63	52.0
KRH03299	Soybean	cytosol	27.36	51.63
KRH32172	Soybean	mitochondrion	19.52	23.9
KRH19545	Soybean	mitochondrion	19.12	23.38

Protein Annotations

Gene3D:1.25.40.10	EntrezGene:100783201	MapMan:21.1.1.4.3	EMBL:ACUP02003516	ncoils:Coil	EnsemblPlantsGene:GLYMA_06G182800
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR011990	InterPro:IPR013026	InterPro:IPR019734
UniProt:K7KVS9	ProteinID:KRH54403.1	ProteinID:KRH54404.1	EnsemblPlants:KRH54405	ProteinID:KRH54405	ProteinID:KRH54405.1
PFAM:PF13374	PFAM:PF13424	PFscan:PS50005	PFscan:PS50293	PANTHER:PTHR19959	PANTHER:PTHR19959:SF156
SMART:SM00028	SUPFAM:SSF48452	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_repeat	UniParc:UPI000233890F
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:-:15704967..15709268

Molecular Weight (calculated)

81754.5 Da

IEP (calculated)

4.794

GRAVY (calculated)

-0.448

Length

753 amino acids

Sequence
(BLAST)

001: MPGIVRNGVH HDEGGSNDLN GDHDSTSKEP LNLVKSPRGG SVSPQRGQGD DGANFGGDEV VEPSIEQLYE NVCDMQSSDQ SPSRQSFGSD GDESRIDSEL
101: RHLVGGRMRE VEIMEEEVGE EKGLPEGSSS SEISSALGGL SNDKKLNQVD EIQEVQPAAT SSGSSEKSIK ASISMVGPDN TSPKSTSKGK IPLSKAPIPR
201: NNGKPLRKQI SGATTGVKTT KNSPMGKSVS RNRAESTAES ALEKPERAPV LLKQARDLIS SGDNPHKALD LALQAMKLFE KFGNEKPSLE LVMCLHVTAA
301: IYCSLGQYGE AIPILERSIE VPVIGESQQH ALAKFAGHMQ LGDTYAMLGQ LENSTMCYTT GLEVQKQILG ETDPRVGETC RYVAEANVQA LQFDEAERLC
401: QMALDIHIAN NSAPSLEEAA DRRLMGLICE TKGNHETALE HLVLASMAMV SNDQEAEVAS VDCSIGDTYL SLSRYDEAVF AYQKALTVFK TSKGENHPAV
501: GLVFVRLADL YNRTGKIRES KSYCESALKI YENPMPGIPP EEIASGLTNI STIYESMNEL EHALKLLQKA LEIYNDTPGQ QSTIAGIEAQ MGVMYYMLGN
601: YSKSYNTLKN AISKLRAIGE KKSSFFGIAL NQMGLACVQC YALSEATELF EEAKSILEQE YGPYHPETLG VSSNLAATYD AIGRLDDAIQ ILEYVVNTRE
701: EKLGTANPEV DDEKRRLGEL LKEAGRVRSR KTRSLENLLD GNAHAANNVV IRA

Best Arabidopsis Sequence Match ( AT1G27500.2 )
(BLAST)

001: MKDSCLFEIK KMEGGSVNES HSNADQMFDT TIEELCKNLC ELQSSNQSPS RQSFGSYGDE SKIDSDLQHL ALGEMRDIDI LEDEGDEDEV AKPEEFDVKS
101: NSSNLDLEVM PRDMEKQTGK KNVTKSNVGV GGMRKKKVGG TKLQNGNEEP SSENVELARF LLNQARNLVS SGDSTHKALE LTHRAAKLFE ASAENGKPCL
201: EWIMCLHVTA AVHCKLKEYN EAIPVLQRSV EIPVVEEGEE HALAKFAGLM QLGDTYAMVG QLESSISCYT EGLNIQKKVL GENDPRVGET CRYLAEALVQ
301: ALRFDEAQQV CETALSIHRE SGLPGSIAEA ADRRLMGLIC ETKGDHENAL EHLVLASMAM AANGQESEVA FVDTSIGDSY LSLSRFDEAI CAYQKSLTAL
401: KTAKGENHPA VGSVYIRLAD LYNRTGKVRE AKSYCENALR IYESHNLEIS PEEIASGLTD ISVICESMNE VEQAITLLQK ALKIYADSPG QKIMIAGIEA
501: QMGVLYYMMG KYMESYNTFK SAISKLRATG KKQSTFFGIA LNQMGLACIQ LDAIEEAVEL FEEAKCILEQ ECGPYHPETL GLYSNLAGAY DAIGRLDDAI
601: KLLGHVVGVR EEKLGTANPV TEDEKRRLAQ LLKEAGNVTG RKAKSLKTLI DSDLTSSSAL R

Arabidopsis Description

Tetratricopeptide repeat (TPR)-like superfamily protein [Source:TAIR;Acc:AT1G27500]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.