Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY27619 | Canola | nucleus | 100.0 | 100.0 |
| AT1G27500.2 | Thale cress | cytosol | 82.4 | 82.15 |
| VIT_17s0000g08260.t01 | Wine grape | cytosol | 63.13 | 56.37 |
| PGSC0003DMT400062960 | Potato | cytosol | 61.3 | 55.34 |
| Solyc03g114320.2.1 | Tomato | cytosol | 61.15 | 55.21 |
| KRH63534 | Soybean | nucleus | 60.55 | 54.96 |
| GSMUA_Achr10P... | Banana | cytosol | 54.17 | 54.09 |
| KRH54405 | Soybean | cytosol | 60.24 | 52.72 |
| Os02t0708400-01 | Rice | plasma membrane | 55.39 | 51.34 |
| Zm00001d051589_P001 | Maize | cytosol | 55.54 | 51.33 |
| EES05647 | Sorghum | cytosol | 55.54 | 51.33 |
| HORVU6Hr1G069310.1 | Barley | cytosol | 55.08 | 51.27 |
| TraesCS6A01G274500.1 | Wheat | cytosol | 55.08 | 51.2 |
| TraesCS6B01G302000.1 | Wheat | cytosol | 55.08 | 51.13 |
| TraesCS6D01G254800.1 | Wheat | cytosol | 54.93 | 50.99 |
| GSMUA_Achr2P09630_001 | Banana | nucleus | 54.78 | 50.49 |
| Zm00001d017793_P001 | Maize | cytosol | 54.02 | 49.93 |
| Bra025315.1-P | Field mustard | cytosol | 50.23 | 49.85 |
| KRH57064 | Soybean | cytosol | 54.78 | 49.45 |
| Bra000724.1-P | Field mustard | plastid | 45.22 | 49.01 |
| KRH03299 | Soybean | cytosol | 27.01 | 44.61 |
| Bra021713.1-P | Field mustard | cytosol | 19.58 | 25.15 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:21.1.1.4.3 | EnsemblPlantsGene:Bra032832 | EnsemblPlants:Bra032832.1 | EnsemblPlants:Bra032832.1-P | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR011990 | InterPro:IPR013026 | InterPro:IPR019734 | UniProt:M4EVJ9 |
| PFAM:PF13374 | PFAM:PF13424 | PFscan:PS50293 | PANTHER:PTHR19959 | PANTHER:PTHR19959:SF156 | SMART:SM00028 |
| SUPFAM:SSF48452 | InterPro:TPR-contain_dom | InterPro:TPR-like_helical_dom_sf | InterPro:TPR_repeat | UniParc:UPI0002542591 | SEG:seg |
Description
AT1G27500 (E=7e-295) | kinesin light chain-related
Coordinates
chrA09:+:12548564..12550617
Molecular Weight (calculated)
72098.4 Da
IEP (calculated)
4.664
GRAVY (calculated)
-0.354
Length
659 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGGGGSVNE LHGDSSADIA FDSTIEELCN NLCELESSKQ SPSRHIFGSY GDDESKIDSD LQHLALGEMH DLDITKDEEG EEEKEVAKPE DSEMARPPSA
101: ATKSTSSKLD TEKQVGKKNA NIPSSGLSNG TRKKKTGTAK SLNGNEEPSS ENVELARFLL NQARNLVSSG ENINKALELT LRANKLFEAS ANNGKPCLEW
201: IMCFHVTAAI HCRLKEYNEA IPLLERSIEI PVLEEGEEHA LAKFAGLMQL GDTYAMVEQL ENSISCYTEG LKIQTKVLGD NDPRVGETCR YLAEALVQAL
301: RFDEAEKVCQ TALSIHRENG LPASLAEAAD RRLMGLICET KGDHENALEH LVLASMAMAA NGQESEVAFV DSSIGDSYLS LSRFDEAICA YQKSLTALKT
401: SKGENHPAVG SIYIRLADLY NRTGKVREAK SYCDNALRIY ESHSLEISPE EIASGLTDIS VIYESMNEVE QAVTLLQKVL KIYTDSPGHK MMIVGIEAQM
501: GVLYYMMGKY LDSYNTFKKA VSKLRATGKK QSTFFGIALN QMGLACVQLD AIEEAVELFE EAKCILEQEC GPYHPETLGL YNNLAGAYDA IGRLDDAIEL
601: LGHVVGAREE NLGTANPGTE EGKRRLVQLL KEAGKVTGRK AKSLQTLIDS DLMTFSALR
101: ATKSTSSKLD TEKQVGKKNA NIPSSGLSNG TRKKKTGTAK SLNGNEEPSS ENVELARFLL NQARNLVSSG ENINKALELT LRANKLFEAS ANNGKPCLEW
201: IMCFHVTAAI HCRLKEYNEA IPLLERSIEI PVLEEGEEHA LAKFAGLMQL GDTYAMVEQL ENSISCYTEG LKIQTKVLGD NDPRVGETCR YLAEALVQAL
301: RFDEAEKVCQ TALSIHRENG LPASLAEAAD RRLMGLICET KGDHENALEH LVLASMAMAA NGQESEVAFV DSSIGDSYLS LSRFDEAICA YQKSLTALKT
401: SKGENHPAVG SIYIRLADLY NRTGKVREAK SYCDNALRIY ESHSLEISPE EIASGLTDIS VIYESMNEVE QAVTLLQKVL KIYTDSPGHK MMIVGIEAQM
501: GVLYYMMGKY LDSYNTFKKA VSKLRATGKK QSTFFGIALN QMGLACVQLD AIEEAVELFE EAKCILEQEC GPYHPETLGL YNNLAGAYDA IGRLDDAIEL
601: LGHVVGAREE NLGTANPGTE EGKRRLVQLL KEAGKVTGRK AKSLQTLIDS DLMTFSALR
001: MEGGSVNESH SNADQMFDTT IEELCKNLCE LQSSNQSPSR QSFGSYGDES KIDSDLQHLA LGEMRDIDIL EDEGDEDEVA KPEEFDVKSN SSNLDLEVMP
101: RDMEKQTGKK NVTKSNVGVG GMRKKKVGGT KLQNGNEEPS SENVELARFL LNQARNLVSS GDSTHKALEL THRAAKLFEA SAENGKPCLE WIMCLHVTAA
201: VHCKLKEYNE AIPVLQRSVE IPVVEEGEEH ALAKFAGLMQ LGDTYAMVGQ LESSISCYTE GLNIQKKVLG ENDPRVGETC RYLAEALVQA LRFDEAQQVC
301: ETALSIHRES GLPGSIAEAA DRRLMGLICE TKGDHENALE HLVLASMAMA ANGQESEVAF VDTSIGDSYL SLSRFDEAIC AYQKSLTALK TAKGENHPAV
401: GSVYIRLADL YNRTGKVREA KSYCENALRI YESHNLEISP EEIASGLTDI SVICESMNEV EQAITLLQKA LKIYADSPGQ KIMIAGIEAQ MGVLYYMMGK
501: YMESYNTFKS AISKLRATGK KQSTFFGIAL NQMGLACIQL DAIEEAVELF EEAKCILEQE CGPYHPETLG LYSNLAGAYD AIGRLDDAIK LLGHVVGVRE
601: EKLGTANPVT EDEKRRLAQL LKEAGNVTGR KAKSLKTLID SDLTSSSALR
101: RDMEKQTGKK NVTKSNVGVG GMRKKKVGGT KLQNGNEEPS SENVELARFL LNQARNLVSS GDSTHKALEL THRAAKLFEA SAENGKPCLE WIMCLHVTAA
201: VHCKLKEYNE AIPVLQRSVE IPVVEEGEEH ALAKFAGLMQ LGDTYAMVGQ LESSISCYTE GLNIQKKVLG ENDPRVGETC RYLAEALVQA LRFDEAQQVC
301: ETALSIHRES GLPGSIAEAA DRRLMGLICE TKGDHENALE HLVLASMAMA ANGQESEVAF VDTSIGDSYL SLSRFDEAIC AYQKSLTALK TAKGENHPAV
401: GSVYIRLADL YNRTGKVREA KSYCENALRI YESHNLEISP EEIASGLTDI SVICESMNEV EQAITLLQKA LKIYADSPGQ KIMIAGIEAQ MGVLYYMMGK
501: YMESYNTFKS AISKLRATGK KQSTFFGIAL NQMGLACIQL DAIEEAVELF EEAKCILEQE CGPYHPETLG LYSNLAGAYD AIGRLDDAIK LLGHVVGVRE
601: EKLGTANPVT EDEKRRLAQL LKEAGNVTGR KAKSLKTLID SDLTSSSALR
Arabidopsis Description
Tetratricopeptide repeat (TPR)-like superfamily protein [Source:TAIR;Acc:AT1G27500]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.