Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400062960 | Potato | cytosol | 98.08 | 98.08 |
| VIT_17s0000g08260.t01 | Wine grape | cytosol | 76.03 | 75.2 |
| GSMUA_Achr10P... | Banana | cytosol | 62.74 | 69.39 |
| KRH63534 | Soybean | nucleus | 67.81 | 68.18 |
| EES05647 | Sorghum | cytosol | 64.38 | 65.92 |
| Solyc08g008460.2.1 | Tomato | cytosol, nucleus | 35.75 | 65.58 |
| Os02t0708400-01 | Rice | plasma membrane | 63.7 | 65.4 |
| Zm00001d051589_P001 | Maize | cytosol | 63.7 | 65.22 |
| KRH54405 | Soybean | cytosol | 67.26 | 65.21 |
| TraesCS6A01G274500.1 | Wheat | cytosol | 63.01 | 64.88 |
| HORVU6Hr1G069310.1 | Barley | cytosol | 62.88 | 64.83 |
| TraesCS6B01G302000.1 | Wheat | cytosol | 63.01 | 64.79 |
| TraesCS6D01G254800.1 | Wheat | cytosol | 62.88 | 64.65 |
| Zm00001d017793_P001 | Maize | cytosol | 63.01 | 64.52 |
| GSMUA_Achr2P09630_001 | Banana | nucleus | 62.33 | 63.64 |
| AT1G27500.2 | Thale cress | cytosol | 56.3 | 62.18 |
| CDY27619 | Canola | nucleus | 55.21 | 61.15 |
| Bra032832.1-P | Field mustard | nucleus | 55.21 | 61.15 |
| Solyc02g086840.2.1 | Tomato | cytosol | 58.08 | 59.63 |
| KRH57064 | Soybean | cytosol | 59.04 | 59.04 |
| CDY56191 | Canola | cytosol | 56.44 | 57.87 |
| CDX90092 | Canola | cytosol, mitochondrion | 9.18 | 53.6 |
| KRH03299 | Soybean | cytosol | 26.85 | 49.12 |
| Solyc09g066290.2.1 | Tomato | plastid | 17.95 | 20.28 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:21.1.1.4.3 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR011990 | InterPro:IPR013026 | InterPro:IPR019734 | UniProt:K4BKT4 | PFAM:PF13176 | PFAM:PF13424 |
| PFscan:PS50005 | PFscan:PS50293 | PANTHER:PTHR19959 | PANTHER:PTHR19959:SF156 | SMART:SM00028 | SUPFAM:SSF48452 |
| EnsemblPlantsGene:Solyc03g114320.2 | EnsemblPlants:Solyc03g114320.2.1 | InterPro:TPR-contain_dom | InterPro:TPR-like_helical_dom_sf | InterPro:TPR_repeat | UniParc:UPI00027681CF |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr3:+:64330893..64334240
Molecular Weight (calculated)
79582.2 Da
IEP (calculated)
4.612
GRAVY (calculated)
-0.531
Length
730 amino acids
Sequence
(BLAST)
(BLAST)
001: MPGVVMDEIH EVGEVKELKE NGNSTPCKEN EEGGLGPRNG GEEHVGDGVV EPSIEELYEN VCEMQSSDQS PSRHSFGSDG DESRIDSELR HLVGGEMREV
101: EIIEEDEEVQ KPEIEDSRSD SGSKKGTSDD VKLDNSPSSS TKDPSSGQPK TPSQLELESE TSAKSNSKGR RASLDKKNGN NTKKVVVGGT SRSRQKSSPA
201: SGSKLKNGTE DSSDSGLDNP DLGPFLLKQA RDLIASGDNS HKALELAHRA AKSFEKCANG KPSLDVVMCL HVTAAIYCNL GQYDDAIPLI EHSLEIPVVE
301: EGQEHALAKF AGYMQLGDTY AMLGQLENSI VSYTTGMEIQ RQVLGDSDPR VGETCRYLAE AHVQALQFDE AEKLCQMALD IHKENGSPPS LEEAADRRLM
401: GLICESKGDH EAALEHLVLA SMAMVANGQE SEVASVDCSI GDTYLSLNRY DEAIFAYQKA LTALKSSKGE NHPAVASVFV RLADLYNRTG KLRDSKSYCE
501: NALRIYGKPI PGIAPEEIAN GLTDVSAIYE SMNELDQALK LLQRALKIYN NAPGQQNTIA GIEAQMGVIY YMLGKYSESY NSFKSAISKL RASGEKKSAF
601: FGVALNQMGL ACVQRYAINE AVELFEESKV ILEQEYGPYH PETLGVYSNL AGTYDAVGRL DEAIEILEYI VGVREEKLGT ANPDVADEKK RLAELLKEAG
701: RVRNRKARSL ENLLDANHRP NAINNDLIIV
101: EIIEEDEEVQ KPEIEDSRSD SGSKKGTSDD VKLDNSPSSS TKDPSSGQPK TPSQLELESE TSAKSNSKGR RASLDKKNGN NTKKVVVGGT SRSRQKSSPA
201: SGSKLKNGTE DSSDSGLDNP DLGPFLLKQA RDLIASGDNS HKALELAHRA AKSFEKCANG KPSLDVVMCL HVTAAIYCNL GQYDDAIPLI EHSLEIPVVE
301: EGQEHALAKF AGYMQLGDTY AMLGQLENSI VSYTTGMEIQ RQVLGDSDPR VGETCRYLAE AHVQALQFDE AEKLCQMALD IHKENGSPPS LEEAADRRLM
401: GLICESKGDH EAALEHLVLA SMAMVANGQE SEVASVDCSI GDTYLSLNRY DEAIFAYQKA LTALKSSKGE NHPAVASVFV RLADLYNRTG KLRDSKSYCE
501: NALRIYGKPI PGIAPEEIAN GLTDVSAIYE SMNELDQALK LLQRALKIYN NAPGQQNTIA GIEAQMGVIY YMLGKYSESY NSFKSAISKL RASGEKKSAF
601: FGVALNQMGL ACVQRYAINE AVELFEESKV ILEQEYGPYH PETLGVYSNL AGTYDAVGRL DEAIEILEYI VGVREEKLGT ANPDVADEKK RLAELLKEAG
701: RVRNRKARSL ENLLDANHRP NAINNDLIIV
001: MKDSCLFEIK KMEGGSVNES HSNADQMFDT TIEELCKNLC ELQSSNQSPS RQSFGSYGDE SKIDSDLQHL ALGEMRDIDI LEDEGDEDEV AKPEEFDVKS
101: NSSNLDLEVM PRDMEKQTGK KNVTKSNVGV GGMRKKKVGG TKLQNGNEEP SSENVELARF LLNQARNLVS SGDSTHKALE LTHRAAKLFE ASAENGKPCL
201: EWIMCLHVTA AVHCKLKEYN EAIPVLQRSV EIPVVEEGEE HALAKFAGLM QLGDTYAMVG QLESSISCYT EGLNIQKKVL GENDPRVGET CRYLAEALVQ
301: ALRFDEAQQV CETALSIHRE SGLPGSIAEA ADRRLMGLIC ETKGDHENAL EHLVLASMAM AANGQESEVA FVDTSIGDSY LSLSRFDEAI CAYQKSLTAL
401: KTAKGENHPA VGSVYIRLAD LYNRTGKVRE AKSYCENALR IYESHNLEIS PEEIASGLTD ISVICESMNE VEQAITLLQK ALKIYADSPG QKIMIAGIEA
501: QMGVLYYMMG KYMESYNTFK SAISKLRATG KKQSTFFGIA LNQMGLACIQ LDAIEEAVEL FEEAKCILEQ ECGPYHPETL GLYSNLAGAY DAIGRLDDAI
601: KLLGHVVGVR EEKLGTANPV TEDEKRRLAQ LLKEAGNVTG RKAKSLKTLI DSDLTSSSAL R
101: NSSNLDLEVM PRDMEKQTGK KNVTKSNVGV GGMRKKKVGG TKLQNGNEEP SSENVELARF LLNQARNLVS SGDSTHKALE LTHRAAKLFE ASAENGKPCL
201: EWIMCLHVTA AVHCKLKEYN EAIPVLQRSV EIPVVEEGEE HALAKFAGLM QLGDTYAMVG QLESSISCYT EGLNIQKKVL GENDPRVGET CRYLAEALVQ
301: ALRFDEAQQV CETALSIHRE SGLPGSIAEA ADRRLMGLIC ETKGDHENAL EHLVLASMAM AANGQESEVA FVDTSIGDSY LSLSRFDEAI CAYQKSLTAL
401: KTAKGENHPA VGSVYIRLAD LYNRTGKVRE AKSYCENALR IYESHNLEIS PEEIASGLTD ISVICESMNE VEQAITLLQK ALKIYADSPG QKIMIAGIEA
501: QMGVLYYMMG KYMESYNTFK SAISKLRATG KKQSTFFGIA LNQMGLACIQ LDAIEEAVEL FEEAKCILEQ ECGPYHPETL GLYSNLAGAY DAIGRLDDAI
601: KLLGHVVGVR EEKLGTANPV TEDEKRRLAQ LLKEAGNVTG RKAKSLKTLI DSDLTSSSAL R
Arabidopsis Description
Tetratricopeptide repeat (TPR)-like superfamily protein [Source:TAIR;Acc:AT1G27500]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.