Factsheet for Bra000724.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 5
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra001578.1-P
Bra009554.1-P
Bra021584.1-P
Bra023900.1-P
Bra027285.1-P
Bra028854.1-P
Bra031258.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G10840.1	Bra001578.1-P	AT3G15000.1	21798944
AT4G10840.1	Bra021584.1-P	AT3G15000.1	21798944
AT4G10840.1	Bra027285.1-P	AT3G15000.1	21798944
AT4G10840.1	Bra023900.1-P	AT3G21175.1	21798944
AT4G10840.1	Bra031258.1-P	AT3G21175.1	21798944
AT4G10840.1	Bra009554.1-P	AT5G03040.1	21798944
AT4G10840.1	Bra028854.1-P	AT5G03040.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX90788	Canola	plastid	97.2	97.52
AT4G10840.1	Thale cress	plastid	92.93	92.78
KRH60081	Soybean	nucleus	73.68	79.57
KRH41360	Soybean	nucleus	75.33	79.24
Solyc08g008460.2.1	Tomato	cytosol, nucleus	51.64	78.89
VIT_02s0025g02090.t01	Wine grape	plastid	74.01	76.14
PGSC0003DMT400031631	Potato	plastid	72.53	73.38
PGSC0003DMT400014982	Potato	plastid	71.88	72.23
TraesCS6D01G030400.1	Wheat	cytosol	53.78	66.19
GSMUA_Achr10P...	Banana	cytosol	63.16	65.75
HORVU6Hr1G004990.1	Barley	cytosol	56.41	64.84
Zm00001d054069_P001	Maize	plasma membrane	60.36	61.78
Os02t0109800-01	Rice	plasma membrane	60.69	61.6
EES06120	Sorghum	plastid	61.35	60.95
TraesCS6B01G037200.1	Wheat	plastid	61.02	60.92
Zm00001d014961_P001	Maize	extracellular, mitochondrion, plasma membrane	60.69	60.29
TraesCS6A01G026600.1	Wheat	plastid	61.35	54.53
Bra025315.1-P	Field mustard	cytosol	51.81	47.44
Bra032832.1-P	Field mustard	nucleus	49.01	45.22
Bra021713.1-P	Field mustard	cytosol	22.37	26.51

Protein Annotations

Gene3D:1.25.40.10	MapMan:21.1.1.4.3	EnsemblPlantsGene:Bra000724	EnsemblPlants:Bra000724.1	EnsemblPlants:Bra000724.1-P	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005856	GO:GO:0005874	GO:GO:0005886	GO:GO:0016020	InterPro:IPR011990	InterPro:IPR013026
InterPro:IPR019734	UniProt:M4C946	PFAM:PF13181	PFAM:PF13374	PFAM:PF13424	PFscan:PS50005
PFscan:PS50293	PANTHER:PTHR19959	PANTHER:PTHR19959:SF202	SMART:SM00028	SUPFAM:SSF48452	InterPro:TPR-contain_dom
InterPro:TPR-like_helical_dom_sf	InterPro:TPR_repeat	UniParc:UPI0002540366	SEG:seg	:	:

Description

AT4G10840 (E=2e-308) | kinesin light chain-related

Coordinates

chrA03:+:12677261..12679742

Molecular Weight (calculated)

66145.1 Da

IEP (calculated)

5.291

GRAVY (calculated)

-0.337

Length

608 amino acids

Sequence
(BLAST)

001: MPTMPGLVSV KTPANAPPLR VSVPDTQQQQ QQPPRTPMKK TPSSTPSRSK PSPGRSAKKD SPGVSSAAAV PDVDDPSLDN PDLGPFLLKL ARDAIASGEG
101: PNKALDYAIR ATKSFERCCA AAAPPVPGGS DGGPVLDLAM SLHVLAAIYC SLGRFDEAVP PLERAIKVPD PARGPDHSLA AFSGHMQLGD TLSMLGQIDR
201: SIACYEEGLK IQIQTLGETD PRVGETCRYL AEAYVQAMQF NKAEELCKKT LEIHRAHSEP ASLEEAADRR LMAIICEAKG DYENALEHLV LASMAMIASG
301: QESEVASIDV SIGNIYMSLC RFDEAVFSYQ KALTVFKSSK GETHPTVASV FVRLAELYHR TGKLRESKSY CENALRIYNK PVPGTTVEEI AGGLTEISAI
401: YESVDEPEEA LKLLQKSMKL LEDKPGQQSA IAGLEARMGV MYYTLGRYED ARNAFESAVT KLRAAGEKSA FFGVVLNQMG LACVQLFKID EAGELFEEAR
501: VILEQERGPC DQDTLGVYSN LAATYDAMGR IEDAIEILEQ VLKLREEKLG TANPDFEDEK KRLAELLKEA GRSRNYKAKS LQNLIDPNAR PPKKEASGKK
601: WPGLGFKF

Best Arabidopsis Sequence Match ( AT4G10840.1 )
(BLAST)

001: MPAMPGLVSV KTPSDTPPLR VAVPDTQPLS NPPRTPMKKT PSSTPSRSKP SPNRSTGKKD SPTVSSSTAA VIDVDDPSLD NPDLGPFLLK LARDAIASGE
101: GPNKALDYAI RATKSFERCC AAVAPPIPGG SDGGPVLDLA MSLHVLAAIY CSLGRFDEAV PPLERAIQVP DPTRGPDHSL AAFSGHMQLG DTLSMLGQID
201: RSIACYEEGL KIQIQTLGDT DPRVGETCRY LAEAYVQAMQ FNKAEELCKK TLEIHRAHSE PASLEEAADR RLMAIICEAK GDYENALEHL VLASMAMIAS
301: GQESEVASID VSIGNIYMSL CRFDEAVFSY QKALTVFKAS KGETHPTVAS VFVRLAELYH RTGKLRESKS YCENALRIYN KPVPGTTVEE IAGGLTEISA
401: IYESVDEPEE ALKLLQKSMK LLEDKPGQQS AIAGLEARMG VMYYTVGRYE DARNAFESAV TKLRAAGEKS AFFGVVLNQM GLACVQLFKI DEAGELFEEA
501: RGILEQERGP CDQDTLGVYS NLAATYDAMG RIEDAIEILE QVLKLREEKL GTANPDFEDE KKRLAELLKE AGRSRNYKAK SLQNLIDPNA RPPKKESSAK
601: KWPSLGFKF

Arabidopsis Description

KLCR1Protein KINESIN LIGHT CHAIN-RELATED 1 [Source:UniProtKB/Swiss-Prot;Acc:O81629]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.