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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 1
  • cytosol 2
  • nucleus 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:plastid
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
Bra025315.1-P

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G03040.1 Bra025315.1-P AT3G27960.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX70333 Canola cytosol 95.97 94.17
Bra028854.1-P Field mustard nucleus, plastid 77.07 81.57
AT5G03040.1 Thale cress cytosol, plastid 74.95 76.57
Bra034081.1-P Field mustard nucleus 49.04 52.03
KRG95941 Soybean nucleus 48.41 47.8
KRH67648 Soybean nucleus 47.13 46.54
VIT_08s0040g02360.t01 Wine grape nucleus 47.13 46.35
Bra001299.1-P Field mustard nucleus 46.5 46.3
PGSC0003DMT400027139 Potato cytosol 46.07 45.11
Solyc10g084280.1.1 Tomato nucleus 45.65 44.98
GSMUA_Achr10P... Banana nucleus 42.89 44.89
KRH32420 Soybean cytosol 45.01 44.73
KRH19825 Soybean cytosol 44.59 44.68
PGSC0003DMT400045333 Potato cytosol 44.59 44.59
Solyc10g086060.1.1 Tomato cytosol 44.59 44.59
PGSC0003DMT400004433 Potato cytosol 45.01 44.17
Solyc09g007410.2.1 Tomato cytosol 44.59 43.48
GSMUA_Achr3P17820_001 Banana cytosol 43.95 43.31
Os05t0123200-01 Rice plasma membrane 43.52 43.25
KXG21175 Sorghum cytosol 43.1 42.92
TraesCS1A01G064100.1 Wheat cytosol 43.31 42.5
Zm00001d035492_P009 Maize cytosol 42.89 42.44
TraesCS1B01G082100.1 Wheat cytosol 43.1 42.29
TraesCS1D01G064700.1 Wheat cytosol 42.89 42.26
Zm00001d010975_P003 Maize cytosol 42.68 42.05
HORVU1Hr1G013210.1 Barley cytosol 43.1 41.94
Bra033443.1-P Field mustard cytosol 39.49 41.8
GSMUA_AchrUn_... Banana mitochondrion, nucleus 40.34 41.39
GSMUA_Achr7P22680_001 Banana cytosol 39.28 39.78
GSMUA_Achr7P18240_001 Banana cytosol 39.28 39.19
GSMUA_Achr10P... Banana cytosol 34.61 38.63
TraesCS3D01G543500.1 Wheat cytosol 39.7 37.7
Os01t0833800-01 Rice plasma membrane 38.85 36.6
KXG33651 Sorghum cytosol 37.79 35.74
TraesCS3B01G603500.1 Wheat cytosol, mitochondrion 39.92 35.74
TraesCS3A01G352500.1 Wheat cytosol 37.79 35.67
HORVU3Hr1G087500.2 Barley cytosol 37.79 35.67
TraesCS3B01G385100.1 Wheat cytosol 37.79 35.67
TraesCS3D01G346500.1 Wheat cytosol 37.79 35.67
TraesCS3A01G538100.1 Wheat cytosol, mitochondrion 39.7 35.22
GSMUA_Achr11P... Banana mitochondrion 34.18 34.85
Zm00001d042973_P007 Maize cytosol 37.16 34.52
Bra005462.1-P Field mustard cytosol, plastid 18.9 33.58
HORVU3Hr1G117830.2 Barley endoplasmic reticulum, extracellular 40.76 32.88
Bra031331.1-P Field mustard cytosol 23.57 28.91
Bra021888.1-P Field mustard plastid 15.71 28.57
Bra034294.1-P Field mustard nucleus 22.93 27.2
Os05t0463300-00 Rice plasma membrane 28.87 27.09
HORVU1Hr1G071700.1 Barley nucleus 28.87 26.46
Bra021588.1-P Field mustard cytosol, plastid 14.44 25.76
TraesCS1A01G288100.2 Wheat nucleus 28.45 25.72
TraesCS1D01G287100.2 Wheat cytosol 28.87 25.71
TraesCS1B01G297500.1 Wheat cytosol 28.45 25.38
OQU78148 Sorghum cytosol 29.3 24.64
Bra001855.1-P Field mustard cytosol 17.41 23.91
Bra007471.1-P Field mustard nucleus 25.05 23.79
Bra017997.1-P Field mustard nucleus, plastid 22.93 22.74
Bra016042.1-P Field mustard cytosol 19.53 22.33
Bra019589.1-P Field mustard nucleus 22.51 22.32
Bra025971.1-P Field mustard nucleus 17.62 22.13
Bra033284.1-P Field mustard nucleus 24.42 21.86
Bra017988.1-P Field mustard nucleus 16.14 21.71
Bra000717.1-P Field mustard nucleus 19.53 21.3
Bra000930.1-P Field mustard mitochondrion, nucleus 23.14 20.76
Bra023846.1-P Field mustard cytosol 18.26 20.62
Zm00001d038395_P005 Maize cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 28.24 20.46
Bra037689.1-P Field mustard cytosol 22.72 20.3
Bra000318.1-P Field mustard nucleus 24.63 19.5
Bra004776.1-P Field mustard nucleus 25.48 19.2
Protein Annotations
EnsemblPlants:Bra009554.1EnsemblPlants:Bra009554.1-PEnsemblPlantsGene:Bra009554GO:GO:0003674GO:GO:0005488GO:GO:0005515
InterPro:IPR000048InterPro:IQ_motif_EF-hand-BSPANTHER:PTHR32295PANTHER:PTHR32295:SF28PFAM:PF00612PFscan:PS50096
SEG:segSMART:SM00015UniParc:UPI0002547C2FUniProt:M4CZA7MapMan:35.1:
Description
AT5G03040 (E=6e-093) iqd2 | iqd2 (IQ-domain 2); calmodulin binding
Coordinates
chrA10:+:17208015..17210021
Molecular Weight (calculated)
51892.4 Da
IEP (calculated)
10.938
GRAVY (calculated)
-0.811
Length
471 amino acids
Sequence
(BLAST)
001: MITSQSSALE VVGLSRDFCC EDFWSSSSSY RSGVAVYRRI KTEDGEGMGK AKWFSSVKKA FSPDSKKSKK HKSPESPNGV RQSPPPPLEV RVAEVVAERN
101: MNLSPVNATT TDVLVVPSSS SAPPPPEVVV RPRARFAGKS NEEAAAILIQ TVFRGYLAKR AIRAMRGLVR VKTLMEGSAV KRQAANTLKC MQTLSRVQSQ
201: IRARRIRMSE ENQARQKQLL QKHAKELAGL KNGDNWNDSI QSKEKVEANL LSKYEATMRR ERALAYAYTH QQNWKNNSKS GNPMFMDPSN PTWGWSWLER
301: WMAGPGRPLE EPNNNLTQPT TPSSARGGTT PRNKNKNKNS FFSPPTPSRL NQSSRKSKDE DDAKSTISVL SERNRRHSIG GSSVKDDESM AGSQALPSYM
401: VTTKSARARL KPQSPLSGGT ITQENDGVAD KASAKKRLSY TNSHALPKPR RFSAPPKVES VDVAVTNGGG S
Best Arabidopsis Sequence Match ( AT5G03040.2 )
(BLAST)
001: MGKKAKWFSS VKKAFSPDSK KSKQKLAEGQ NGVISNPPVV DNVRQSSSSP PPALAPREVR VAEVIVERNR DLSPPSTADA VNVTATDVPV VPSSSAPGVV
101: RRATPTRFAG KSNEEAAAIL IQTIFRGYLA RRALRAMRGL VRLKLLMEGS VVKRQAANTL KCMQTLSRVQ SQIRARRIRM SEENQARQKQ LLQKHAKELA
201: GLKNGDNWND SIQSKEKVEA NLLSKYEATM RRERALAYSY SHQQNWKNNS KSGNPMFMDP SNPTWGWSWL ERWMAGRPLE SSEKEQSNSN NDNAASVKGS
301: INRNEAAKSL TRNGSTQPNT PSSARGTPRN KNSFFSPPTP SRLNQSSRKS NDDDSKSTIS VLSERNRRHS IAGSSVRDDE SLAGSPALPS YMVPTKSARA
401: RLKPQSPLGG TTQENEGFTD KASAKKRLSY PTSPALPKPR RFSAPPKVES GGVTVTNGAG S
Arabidopsis Description
iqd2At5g03040/F15A17_70 [Source:UniProtKB/TrEMBL;Acc:Q93ZH7]
SUBAcon: [plastid,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.