Factsheet for Zm00001d035492_P009

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d004812_P002
Zm00001d017793_P001
Zm00001d023560_P002
Zm00001d051589_P001
Zm00001d053016_P002

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G03040.1	Zm00001d017793_P001	AT3G27960.1	21798944
AT5G03040.1	Zm00001d051589_P001	AT3G27960.1	21798944
AT5G03040.1	Zm00001d004812_P002	AT4G09570.1	19130088
AT5G03040.1	Zm00001d023560_P002	AT4G09570.1	19130088
AT5G03040.1	Zm00001d053016_P002	AT4G09570.1	19130088

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d010975_P003	Maize	cytosol	89.71	89.33
Os05t0123200-01	Rice	plasma membrane	82.56	82.91
HORVU1Hr1G013210.1	Barley	cytosol	79.62	78.31
TraesCS1A01G064100.1	Wheat	cytosol	78.78	78.12
TraesCS1D01G064700.1	Wheat	cytosol	78.36	78.03
TraesCS1B01G082100.1	Wheat	cytosol	78.15	77.5
GSMUA_Achr3P17820_001	Banana	cytosol	61.76	61.51
GSMUA_Achr10P...	Banana	nucleus	56.72	60.0
GSMUA_Achr7P18240_001	Banana	cytosol	53.78	54.24
VIT_08s0040g02360.t01	Wine grape	nucleus	53.36	53.03
KRH67648	Soybean	nucleus	52.31	52.2
KRG95941	Soybean	nucleus	52.31	52.2
CDY11238	Canola	cytosol, plastid	44.75	51.57
Solyc10g084280.1.1	Tomato	nucleus	51.68	51.46
KRH32420	Soybean	cytosol	51.05	51.27
PGSC0003DMT400027139	Potato	cytosol	51.47	50.94
KRH19825	Soybean	cytosol	50.21	50.85
PGSC0003DMT400045333	Potato	cytosol	49.37	49.89
Solyc10g086060.1.1	Tomato	cytosol	49.37	49.89
PGSC0003DMT400004433	Potato	cytosol	50.21	49.79
Solyc09g007410.2.1	Tomato	cytosol	50.42	49.69
CDX80849	Canola	cytosol, plastid	44.33	49.53
CDY04876	Canola	nucleus, plastid	44.75	47.87
Bra028854.1-P	Field mustard	nucleus, plastid	44.54	47.64
CDY10410	Canola	cytosol, plastid	44.33	47.52
AT5G03040.1	Thale cress	cytosol, plastid	45.8	47.29
CDY55696	Canola	nucleus, plastid	43.07	46.91
Zm00001d042973_P007	Maize	cytosol	47.06	44.18
AT3G09710.2	Thale cress	nucleus	42.44	43.16
Bra009554.1-P	Field mustard	cytosol	42.44	42.89
CDX70333	Canola	cytosol	43.07	42.71
Bra034081.1-P	Field mustard	nucleus	38.24	40.99
Bra001299.1-P	Field mustard	nucleus	35.71	35.94
CDX73992	Canola	nucleus	35.71	35.64
CDY07937	Canola	nucleus	34.45	34.31
CDY41307	Canola	cytosol	38.66	33.64
CDY22198	Canola	cytosol	38.87	33.09
Zm00001d045305_P001	Maize	nucleus	20.59	29.25
Zm00001d039471_P001	Maize	cytosol	26.05	27.56
Zm00001d049684_P002	Maize	cytosol, mitochondrion	29.2	25.55
Zm00001d034366_P003	Maize	mitochondrion	23.74	25.28
Zm00001d038861_P001	Maize	cytosol, plastid	22.69	25.17
Zm00001d043691_P001	Maize	mitochondrion	22.27	24.15
Zm00001d038395_P005	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	32.14	23.54
Zm00001d033211_P002	Maize	cytosol	21.01	23.31
Zm00001d031098_P004	Maize	cytosol	24.58	23.17
Zm00001d013112_P011	Maize	mitochondrion	24.37	23.02
Zm00001d012167_P001	Maize	cytosol	27.1	22.32
Zm00001d009320_P001	Maize	nucleus	10.71	22.08

Protein Annotations

EntrezGene:100274440	MapMan:35.1	ProteinID:AQK79103.1	ProteinID:AQK79106.1	ProteinID:AQK79107.1	ProteinID:AQK79109.1
ProteinID:AQK79110.1	UniProt:B4F9U2	EMBL:BT033880	EMBL:BT043055	EMBL:BT069616	ncoils:Coil
EMBL:EU960733	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS
EMBL:KJ728184	PFAM:PF00612	PFscan:PS50096	PANTHER:PTHR32295	PANTHER:PTHR32295:SF89	SMART:SM00015
UniParc:UPI00017B62C7	EnsemblPlantsGene:Zm00001d035492	EnsemblPlants:Zm00001d035492_P009	EnsemblPlants:Zm00001d035492_T009	SEG:seg	:

Description

IQ-domain 3

Coordinates

chr6:-:29354391..29358392

Molecular Weight (calculated)

51852.3 Da

IEP (calculated)

11.035

GRAVY (calculated)

-0.795

Length

476 amino acids

Sequence
(BLAST)

001: MGKKGKWFGA VKKVFSPESK EKKEERLRRK SAASNPAPVD LTPSTSLEVN VSVPPPPAPP PVPRQTDEVR VPEAEQEQSK HVTLEEAPAA AAAPAQASVL
101: PPGAPTEELA AIKIQTAFRG YLARRALRAL RGLVRLKSLV EGNSVKRQSA STLRCMQTLS RVQSQIRSRR AKMSEENQAL QRQLLLKQEL ENFRMGENWD
201: DSTQSKEQIE ASLISRQEAA IRRERALAYA FSHQWKSTSR SANPMFVDPN NLQWGWSWLE RWMAAKPWEG RNGTDKESNI DRGSVKNMSL NLGVGEGEIT
301: KAFNRRDSKP EKPSPPTPKP ARPASRQSPS TPSARVAPIP ARRKSSTPKN GLSQVDDDVR SVLSVQSERP RRHSIATTST MRDDESLASS PSLPSYMVPT
401: ESARAKSRTA TANGAETPEK GGSAGPVKKR LSFQGGAAAA SPMRRHSGPP KVESAVKDIA APPQPEALVA NGGGSK

Best Arabidopsis Sequence Match ( AT5G03040.2 )
(BLAST)

001: MGKKAKWFSS VKKAFSPDSK KSKQKLAEGQ NGVISNPPVV DNVRQSSSSP PPALAPREVR VAEVIVERNR DLSPPSTADA VNVTATDVPV VPSSSAPGVV
101: RRATPTRFAG KSNEEAAAIL IQTIFRGYLA RRALRAMRGL VRLKLLMEGS VVKRQAANTL KCMQTLSRVQ SQIRARRIRM SEENQARQKQ LLQKHAKELA
201: GLKNGDNWND SIQSKEKVEA NLLSKYEATM RRERALAYSY SHQQNWKNNS KSGNPMFMDP SNPTWGWSWL ERWMAGRPLE SSEKEQSNSN NDNAASVKGS
301: INRNEAAKSL TRNGSTQPNT PSSARGTPRN KNSFFSPPTP SRLNQSSRKS NDDDSKSTIS VLSERNRRHS IAGSSVRDDE SLAGSPALPS YMVPTKSARA
401: RLKPQSPLGG TTQENEGFTD KASAKKRLSY PTSPALPKPR RFSAPPKVES GGVTVTNGAG S

Arabidopsis Description

iqd2At5g03040/F15A17_70 [Source:UniProtKB/TrEMBL;Acc:Q93ZH7]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.