Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G03040.1 | CDX86457 | AT3G27960.1 | 21798944 |
| AT5G03040.1 | CDY58518 | AT3G27960.1 | 21798944 |
| AT5G03040.1 | CDX90725 | AT4G09570.1 | 19130088 |
| AT5G03040.1 | CDY05064 | AT4G09570.1 | 19130088 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra009554.1-P | Field mustard | cytosol | 94.17 | 95.97 |
| CDY10410 | Canola | cytosol, plastid | 85.83 | 92.79 |
| CDX80849 | Canola | cytosol, plastid | 74.58 | 84.04 |
| CDY11238 | Canola | cytosol, plastid | 72.08 | 83.78 |
| CDY04876 | Canola | nucleus, plastid | 77.5 | 83.6 |
| CDY55696 | Canola | nucleus, plastid | 73.96 | 81.24 |
| AT5G03040.1 | Thale cress | cytosol, plastid | 74.58 | 77.66 |
| KRG95941 | Soybean | nucleus | 48.33 | 48.64 |
| CDX73992 | Canola | nucleus | 47.29 | 47.59 |
| KRH67648 | Soybean | nucleus | 47.08 | 47.38 |
| VIT_08s0040g02360.t01 | Wine grape | nucleus | 46.88 | 46.97 |
| GSMUA_Achr10P... | Banana | nucleus | 43.12 | 46.0 |
| PGSC0003DMT400027139 | Potato | cytosol | 46.04 | 45.95 |
| Solyc10g084280.1.1 | Tomato | nucleus | 45.62 | 45.82 |
| CDY07937 | Canola | nucleus | 45.42 | 45.61 |
| KRH32420 | Soybean | cytosol | 45.0 | 45.57 |
| KRH19825 | Soybean | cytosol | 44.58 | 45.53 |
| PGSC0003DMT400045333 | Potato | cytosol | 44.58 | 45.44 |
| Solyc10g086060.1.1 | Tomato | cytosol | 44.58 | 45.44 |
| PGSC0003DMT400004433 | Potato | cytosol | 44.58 | 44.58 |
| GSMUA_Achr3P17820_001 | Banana | cytosol | 44.17 | 44.35 |
| Os05t0123200-01 | Rice | plasma membrane | 43.54 | 44.09 |
| Solyc09g007410.2.1 | Tomato | cytosol | 44.17 | 43.89 |
| KXG21175 | Sorghum | cytosol | 42.92 | 43.55 |
| TraesCS1A01G064100.1 | Wheat | cytosol | 43.12 | 43.12 |
| Zm00001d035492_P009 | Maize | cytosol | 42.71 | 43.07 |
| TraesCS1B01G082100.1 | Wheat | cytosol | 42.92 | 42.92 |
| TraesCS1D01G064700.1 | Wheat | cytosol | 42.71 | 42.89 |
| CDY41307 | Canola | cytosol | 48.75 | 42.78 |
| Zm00001d010975_P003 | Maize | cytosol | 42.5 | 42.68 |
| HORVU1Hr1G013210.1 | Barley | cytosol | 42.92 | 42.56 |
| CDY22198 | Canola | cytosol | 49.17 | 42.22 |
| GSMUA_AchrUn_... | Banana | mitochondrion, nucleus | 40.21 | 42.05 |
| CDX95328 | Canola | cytosol | 38.75 | 41.8 |
| CDY23202 | Canola | cytosol | 38.33 | 41.35 |
| GSMUA_Achr7P18240_001 | Banana | cytosol | 39.58 | 40.25 |
| GSMUA_Achr7P22680_001 | Banana | cytosol | 38.96 | 40.22 |
| GSMUA_Achr10P... | Banana | cytosol | 34.38 | 39.1 |
| TraesCS3D01G543500.1 | Wheat | cytosol | 39.58 | 38.31 |
| Os01t0833800-01 | Rice | plasma membrane | 38.75 | 37.2 |
| KXG33651 | Sorghum | cytosol | 38.12 | 36.75 |
| HORVU3Hr1G087500.2 | Barley | cytosol | 38.12 | 36.67 |
| TraesCS3A01G352500.1 | Wheat | cytosol | 38.12 | 36.67 |
| TraesCS3B01G385100.1 | Wheat | cytosol | 38.12 | 36.67 |
| TraesCS3D01G346500.1 | Wheat | cytosol | 38.12 | 36.67 |
| TraesCS3B01G603500.1 | Wheat | cytosol, mitochondrion | 39.79 | 36.31 |
| TraesCS3A01G538100.1 | Wheat | cytosol, mitochondrion | 39.38 | 35.59 |
| Zm00001d042973_P007 | Maize | cytosol | 37.5 | 35.5 |
| GSMUA_Achr11P... | Banana | mitochondrion | 33.96 | 35.28 |
| CDY17214 | Canola | cytosol, plastid | 18.75 | 33.96 |
| CDY27925 | Canola | plastid | 18.75 | 33.96 |
| HORVU3Hr1G117830.2 | Barley | endoplasmic reticulum, extracellular | 41.25 | 33.9 |
| CDY38525 | Canola | cytosol | 26.88 | 31.23 |
| CDY62768 | Canola | cytosol | 17.08 | 29.6 |
| CDY37387 | Canola | cytosol | 22.92 | 28.65 |
| CDY32322 | Canola | cytosol, plastid | 15.0 | 27.8 |
| CDY10618 | Canola | cytosol | 23.33 | 27.59 |
| CDX77034 | Canola | cytosol | 22.71 | 27.53 |
| CDY35313 | Canola | nucleus | 22.71 | 27.46 |
| Os05t0463300-00 | Rice | plasma membrane | 28.54 | 27.29 |
| HORVU1Hr1G071700.1 | Barley | nucleus | 28.75 | 26.85 |
| CDY24286 | Canola | cytosol | 22.29 | 26.49 |
| CDX83237 | Canola | cytosol | 27.92 | 26.43 |
| TraesCS1A01G288100.2 | Wheat | nucleus | 28.54 | 26.3 |
| TraesCS1D01G287100.2 | Wheat | cytosol | 28.96 | 26.28 |
| CDY20099 | Canola | cytosol | 14.38 | 26.14 |
| TraesCS1B01G297500.1 | Wheat | cytosol | 28.54 | 25.95 |
| CDX92933 | Canola | cytosol, plastid | 21.67 | 25.94 |
| CDX96427 | Canola | cytosol | 13.12 | 25.93 |
| OQU78148 | Sorghum | cytosol | 29.58 | 25.36 |
| CDY30433 | Canola | cytosol | 23.33 | 24.89 |
| CDX72935 | Canola | cytosol | 13.33 | 24.33 |
| CDY23391 | Canola | cytosol | 23.33 | 24.3 |
| CDX71881 | Canola | nucleus | 24.79 | 24.09 |
| CDY05984 | Canola | nucleus | 24.79 | 24.04 |
| CDX92931 | Canola | mitochondrion, nucleus | 12.71 | 23.92 |
| CDY05917 | Canola | mitochondrion, nucleus | 23.12 | 23.37 |
| CDY15200 | Canola | nucleus | 24.79 | 23.29 |
| CDY08120 | Canola | mitochondrion, nucleus | 22.92 | 23.21 |
| CDY39505 | Canola | cytosol | 18.96 | 23.04 |
| CDX90011 | Canola | nucleus | 24.38 | 23.03 |
| CDX86983 | Canola | nucleus | 22.71 | 22.95 |
| CDY58749 | Canola | cytosol | 21.46 | 22.59 |
| CDY00196 | Canola | nucleus | 22.29 | 22.53 |
| CDY26241 | Canola | nucleus | 17.29 | 22.13 |
| CDY48305 | Canola | nucleus | 17.29 | 22.13 |
| CDY05111 | Canola | nucleus | 19.58 | 21.91 |
| Zm00001d038395_P005 | Maize | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 29.38 | 21.69 |
| CDX90766 | Canola | nucleus | 19.38 | 21.58 |
| CDY69140 | Canola | mitochondrion, nucleus | 23.54 | 21.52 |
| CDY08131 | Canola | nucleus | 15.42 | 21.51 |
| CDX91859 | Canola | mitochondrion, nucleus | 23.54 | 21.32 |
| CDY24282 | Canola | mitochondrion | 13.54 | 21.31 |
| CDY05931 | Canola | nucleus | 15.21 | 20.74 |
| CDX79809 | Canola | nucleus | 25.83 | 20.74 |
| CDY05918 | Canola | mitochondrion | 13.33 | 20.38 |
| CDY66694 | Canola | nucleus | 25.42 | 20.37 |
| CDX83468 | Canola | plasma membrane | 23.33 | 20.33 |
| CDY44247 | Canola | nucleus | 22.92 | 19.78 |
| CDX96426 | Canola | nucleus, plastid | 3.33 | 15.69 |
| CDX72934 | Canola | nucleus, plastid | 3.12 | 14.71 |
Protein Annotations
| EnsemblPlants:CDX70333 | EnsemblPlantsGene:GSBRNA2T00136492001 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:DUF4005 |
| InterPro:IPR000048 | InterPro:IQ_motif_EF-hand-BS | PANTHER:PTHR32295 | PANTHER:PTHR32295:SF28 | PFAM:PF00612 | PFAM:PF13178 |
| PFscan:PS50096 | ProteinID:CDX70333 | ProteinID:CDX70333.1 | SEG:seg | SMART:SM00015 | UniParc:UPI0004EE8B83 |
| MapMan:35.1 | : | : | : | : | : |
Description
BnaA10g26820D
Coordinates
chrLK031790:+:4163249..4167710
Molecular Weight (calculated)
52909.5 Da
IEP (calculated)
10.903
GRAVY (calculated)
-0.821
Length
480 amino acids
Sequence
(BLAST)
(BLAST)
001: MHPYRLLAPV SSQSSALEAV GLSRDFCCED FWSSSSSYRS GVAVYRRIKT EDGEGMGKAK WFSSVKKAFS PDSKKSKKHK SPESPNGVRQ SPPPPPLEVR
101: VAEVVAERNI NLSPPSTDAT TTDVLVVPSS SSAPPPEVVV RPRARFAGKS NEEAAAILIQ TVFRGYLAKR AIRAMRGLVR LKTLMEGSAV KRQAANTLKC
201: MQTLSRVQSQ IRARRIRMSE ENQARQKQLL QKHAKELAGL KNGDNWNDSI QSKEKVEANL LSKYEATMRR ERALAYAYTH QQNWKNNSKS GNPMFMDPSN
301: PTWGWSWLER WMAGPGRPLE EPNNNLTQPN TPSSARGGTT PRNKNKNKNS FFSPPTPSRL NQSFRKSKED DDAKSTISVL SERNRRHSIG GSSVKDDESL
401: AGSQALPSYM VPTKSARARL KPQSPLSGST TQENDGIADK ASAKKRLSYT NSPALPKPRR FSAPPKVESV DVAVTNGGGS
101: VAEVVAERNI NLSPPSTDAT TTDVLVVPSS SSAPPPEVVV RPRARFAGKS NEEAAAILIQ TVFRGYLAKR AIRAMRGLVR LKTLMEGSAV KRQAANTLKC
201: MQTLSRVQSQ IRARRIRMSE ENQARQKQLL QKHAKELAGL KNGDNWNDSI QSKEKVEANL LSKYEATMRR ERALAYAYTH QQNWKNNSKS GNPMFMDPSN
301: PTWGWSWLER WMAGPGRPLE EPNNNLTQPN TPSSARGGTT PRNKNKNKNS FFSPPTPSRL NQSFRKSKED DDAKSTISVL SERNRRHSIG GSSVKDDESL
401: AGSQALPSYM VPTKSARARL KPQSPLSGST TQENDGIADK ASAKKRLSYT NSPALPKPRR FSAPPKVESV DVAVTNGGGS
001: MVKKAKWLKN VKKAFSPDSK KLKHESVECQ DSVISYPVLI ATSRSSSPQF EVRVDEVNYE QKKNLYPPSS DSVTATVAHV LVDSPPSSPE SVHQAIVVNR
101: FAGKSKEEAA AILIQSTFRG HLARRESQVM RGQERLKLLM EGSVVQRQAA ITLKCMQTLS RVQSQIRSRR IRMSEENQAR HKQLLQKHAK ELGGLKNGGN
201: WNYSNQSKEQ VEAGMLHKYE ATMRRERALA YAFTHQQNLK SFSKTANPMF MDPSNPTWGW SWLERWMAGR PWESSEKEQN TTNNDNSSVK NSTNRNSQGG
301: ETAKSSNRNK LNSSTKPNTP SASSTATRNP RKKRPIPSSI KSKSSDDEAK SSERNRRPSI ARPSVSDDET LSSSTARRSS NLIPTTKSAR GKPKSQTSSR
401: VAVTTSTTEE SSILPEKAPA KKRLSTSASP APKPRRSSAP PKVEKGVLKA ERTP
101: FAGKSKEEAA AILIQSTFRG HLARRESQVM RGQERLKLLM EGSVVQRQAA ITLKCMQTLS RVQSQIRSRR IRMSEENQAR HKQLLQKHAK ELGGLKNGGN
201: WNYSNQSKEQ VEAGMLHKYE ATMRRERALA YAFTHQQNLK SFSKTANPMF MDPSNPTWGW SWLERWMAGR PWESSEKEQN TTNNDNSSVK NSTNRNSQGG
301: ETAKSSNRNK LNSSTKPNTP SASSTATRNP RKKRPIPSSI KSKSSDDEAK SSERNRRPSI ARPSVSDDET LSSSTARRSS NLIPTTKSAR GKPKSQTSSR
401: VAVTTSTTEE SSILPEKAPA KKRLSTSASP APKPRRSSAP PKVEKGVLKA ERTP
Arabidopsis Description
IQD1IQ-domain 1 [Source:UniProtKB/TrEMBL;Acc:F4J1A4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.