Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY24282 | Canola | mitochondrion | 71.37 | 59.67 |
| CDX92933 | Canola | cytosol, plastid | 88.63 | 56.36 |
| CDY24286 | Canola | cytosol | 89.02 | 56.19 |
| Bra001855.1-P | Field mustard | cytosol | 74.12 | 55.1 |
| AT3G22190.2 | Thale cress | cytosol | 81.18 | 49.05 |
| CDY10618 | Canola | cytosol | 77.65 | 48.77 |
| CDY37387 | Canola | cytosol | 70.98 | 47.14 |
| CDY39505 | Canola | cytosol | 67.84 | 43.8 |
| CDY58749 | Canola | cytosol | 70.98 | 39.69 |
| VIT_06s0009g00210.t01 | Wine grape | cytosol | 53.33 | 30.56 |
| Solyc11g071840.1.1 | Tomato | cytosol | 50.98 | 29.02 |
| KRH39086 | Soybean | cytosol | 48.63 | 28.57 |
| KRH26707 | Soybean | cytosol | 46.67 | 28.2 |
| KRH22612 | Soybean | cytosol | 46.67 | 28.0 |
| GSMUA_Achr4P31410_001 | Banana | cytosol | 45.88 | 26.59 |
| GSMUA_Achr5P02600_001 | Banana | cytosol | 45.49 | 26.42 |
| Os03t0787200-01 | Rice | cytosol | 43.53 | 26.3 |
| GSMUA_Achr4P22800_001 | Banana | cytosol | 43.53 | 25.58 |
| Os12t0619000-01 | Rice | cytosol | 43.14 | 24.89 |
| TraesCS5A01G425800.1 | Wheat | cytosol, mitochondrion | 41.96 | 24.88 |
| TraesCS5B01G427800.1 | Wheat | cytosol, mitochondrion | 41.18 | 24.42 |
| EER90769 | Sorghum | mitochondrion | 41.96 | 24.32 |
| Os03t0648300-01 | Rice | cytosol | 40.78 | 23.64 |
| HORVU5Hr1G007780.1 | Barley | cytosol | 39.61 | 23.54 |
| TraesCS5D01G037300.2 | Wheat | nucleus | 39.61 | 23.49 |
| KXG24027 | Sorghum | cytosol | 40.39 | 23.41 |
| Zm00001d034366_P003 | Maize | mitochondrion | 40.78 | 23.27 |
| TraesCSU01G076200.1 | Wheat | cytosol, mitochondrion | 39.22 | 23.26 |
| TraesCS5A01G029600.3 | Wheat | nucleus | 39.22 | 23.04 |
| EER91163 | Sorghum | cytosol | 37.25 | 22.51 |
| TraesCS5B01G375000.1 | Wheat | nucleus | 38.04 | 22.25 |
| TraesCS5B01G028200.1 | Wheat | nucleus | 38.43 | 22.12 |
| TraesCS5D01G382500.1 | Wheat | nucleus | 37.65 | 21.92 |
| TraesCS5A01G373000.1 | Wheat | nucleus | 37.25 | 21.79 |
| HORVU5Hr1G092660.2 | Barley | nucleus | 37.25 | 21.69 |
| Zm00001d033211_P002 | Maize | cytosol | 35.69 | 21.21 |
| Zm00001d013112_P011 | Maize | mitochondrion | 41.18 | 20.83 |
| Zm00001d031098_P004 | Maize | cytosol | 40.39 | 20.4 |
| CDY17214 | Canola | cytosol, plastid | 19.22 | 18.49 |
| CDY27925 | Canola | plastid | 19.22 | 18.49 |
| CDY32322 | Canola | cytosol, plastid | 18.43 | 18.15 |
| CDY20099 | Canola | cytosol | 18.04 | 17.42 |
| CDX77034 | Canola | cytosol | 26.67 | 17.17 |
| CDY35313 | Canola | nucleus | 26.27 | 16.88 |
| CDY62768 | Canola | cytosol | 17.65 | 16.25 |
| CDY55696 | Canola | nucleus, plastid | 25.88 | 15.1 |
| CDX80849 | Canola | cytosol, plastid | 25.1 | 15.02 |
| CDY11238 | Canola | cytosol, plastid | 24.31 | 15.01 |
| CDY04876 | Canola | nucleus, plastid | 25.88 | 14.83 |
| CDY05918 | Canola | mitochondrion | 17.25 | 14.01 |
| CDX96427 | Canola | cytosol | 13.33 | 13.99 |
| CDY10410 | Canola | cytosol, plastid | 24.31 | 13.96 |
| CDX72935 | Canola | cytosol | 14.12 | 13.69 |
| CDY23202 | Canola | cytosol | 22.35 | 12.81 |
| CDY48305 | Canola | nucleus | 18.82 | 12.8 |
| CDY26241 | Canola | nucleus | 18.82 | 12.8 |
| CDX70333 | Canola | cytosol | 23.92 | 12.71 |
| CDX95328 | Canola | cytosol | 21.96 | 12.58 |
| CDY38525 | Canola | cytosol | 18.43 | 11.38 |
| CDX90011 | Canola | nucleus | 20.78 | 10.43 |
| CDY15200 | Canola | nucleus | 20.78 | 10.37 |
| CDY41307 | Canola | cytosol | 21.96 | 10.24 |
| CDX90766 | Canola | nucleus | 16.86 | 9.98 |
| CDY05984 | Canola | nucleus | 19.22 | 9.9 |
| CDY07937 | Canola | nucleus | 18.43 | 9.83 |
| CDX83237 | Canola | cytosol | 19.22 | 9.66 |
| CDY22198 | Canola | cytosol | 21.18 | 9.66 |
| CDX73992 | Canola | nucleus | 18.04 | 9.64 |
| CDY05111 | Canola | nucleus | 16.08 | 9.56 |
| CDX71881 | Canola | nucleus | 18.43 | 9.51 |
| CDY08120 | Canola | mitochondrion, nucleus | 17.65 | 9.49 |
| CDY05917 | Canola | mitochondrion, nucleus | 17.25 | 9.26 |
| CDX86983 | Canola | nucleus | 16.86 | 9.05 |
| CDX96426 | Canola | nucleus, plastid | 3.53 | 8.82 |
| CDX72934 | Canola | nucleus, plastid | 3.53 | 8.82 |
| CDX91859 | Canola | mitochondrion, nucleus | 18.04 | 8.68 |
| CDY30433 | Canola | cytosol | 15.29 | 8.67 |
| CDY00196 | Canola | nucleus | 16.08 | 8.63 |
| CDY69140 | Canola | mitochondrion, nucleus | 17.25 | 8.38 |
| CDY23391 | Canola | cytosol | 14.51 | 8.03 |
| CDY05931 | Canola | nucleus | 10.59 | 7.67 |
| CDY08131 | Canola | nucleus | 10.2 | 7.56 |
| CDX79809 | Canola | nucleus | 16.08 | 6.86 |
| CDX83468 | Canola | plasma membrane | 14.12 | 6.53 |
| CDY66694 | Canola | nucleus | 15.29 | 6.51 |
| CDY44247 | Canola | nucleus | 13.73 | 6.29 |
Protein Annotations
| EnsemblPlants:CDX92931 | EnsemblPlantsGene:GSBRNA2T00154794001 | PANTHER:PTHR32295 | PANTHER:PTHR32295:SF12 | ProteinID:CDX92931 | ProteinID:CDX92931.1 |
| SEG:seg | UniParc:UPI0004EEA470 | MapMan:35.2 | : | : | : |
Description
BnaA03g36530D
Coordinates
chrLK031874:-:117467..120010
Molecular Weight (calculated)
28521.6 Da
IEP (calculated)
11.177
GRAVY (calculated)
-0.898
Length
255 amino acids
Sequence
(BLAST)
(BLAST)
001: MSMDRTITAR VRARRVRLSL ECETGQQTLQ QQEGWCDSIG SVEQIQAKLI KRQEGADKRE RAMAYALTHQ WQAGTRQLST HSGFQPDKNN WGWNWLERWM
101: AVRPWENRFL DSSNLREDAN LNSMEQCENV HRTQMKSASR MPNTSTLVSG VSSGKATRPS LSDNDSSSPG SIPVVSKARS KLVKDDLAVE VNSRRHGACP
201: RSHSNPKERL SLPNSGKSLG SRSGKAIIGA GKLTQASAQN QRRRNSDPIK QRLLA
101: AVRPWENRFL DSSNLREDAN LNSMEQCENV HRTQMKSASR MPNTSTLVSG VSSGKATRPS LSDNDSSSPG SIPVVSKARS KLVKDDLAVE VNSRRHGACP
201: RSHSNPKERL SLPNSGKSLG SRSGKAIIGA GKLTQASAQN QRRRNSDPIK QRLLA
001: MGASGRWIKA LVGFTKSDKS RSSKKDENVK VATKSRFGRK NSVDFDFEKF QDGFEDSNTR SMVDTGVSTS TSLQSYGGVA YDEQSRENRA ATRIQTAYRG
101: FLARRALRAL KGLVRLQALV RGHAVRKQAA VTLRCMQALV RVQARVRARR VRLALELESE TSQQTLQQQL ADEARVREIE EGWCDSIGSV EQIQAKLLKR
201: QEAAAKRERA MAYALTHQWQ AGTRLLSAHS GFQPDKNNWG WNWLERWMAV RPWENRFLDS NLRDDAKLGE NGMEQSENVP KTQIKSVSKM PNTSNLVSGV
301: SSQMTGPCQS DGDSSSPGIS SSIPVVSKAK SKPAKDDLAV EVNSRPGAGP RSHSNPKERS REPNRSSKER LSLPNSGKSL GSQSTKANRA GKLTPASQKV
401: VEEKSAQNQR RRNSDPIKQR LA
101: FLARRALRAL KGLVRLQALV RGHAVRKQAA VTLRCMQALV RVQARVRARR VRLALELESE TSQQTLQQQL ADEARVREIE EGWCDSIGSV EQIQAKLLKR
201: QEAAAKRERA MAYALTHQWQ AGTRLLSAHS GFQPDKNNWG WNWLERWMAV RPWENRFLDS NLRDDAKLGE NGMEQSENVP KTQIKSVSKM PNTSNLVSGV
301: SSQMTGPCQS DGDSSSPGIS SSIPVVSKAK SKPAKDDLAV EVNSRPGAGP RSHSNPKERS REPNRSSKER LSLPNSGKSL GSQSTKANRA GKLTPASQKV
401: VEEKSAQNQR RRNSDPIKQR LA
Arabidopsis Description
IQD5IQD5 [Source:UniProtKB/TrEMBL;Acc:A0A178VHN2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.