Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 1
- mitochondrion 4
- cytosol 1
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDY05918 | Canola | mitochondrion | 66.11 | 100.0 |
CDY08120 | Canola | mitochondrion, nucleus | 95.58 | 95.78 |
AT3G49260.3 | Thale cress | nucleus | 88.0 | 88.56 |
CDX86983 | Canola | nucleus | 84.42 | 84.42 |
CDY00196 | Canola | nucleus | 84.21 | 84.21 |
KRH53505 | Soybean | cytosol | 47.79 | 50.9 |
VIT_16s0098g01790.t01 | Wine grape | cytosol, endoplasmic reticulum, nucleus | 48.84 | 50.22 |
KRH64435 | Soybean | nucleus | 47.79 | 49.03 |
KRH16503 | Soybean | cytosol, endoplasmic reticulum, mitochondrion, nucleus | 47.16 | 48.91 |
PGSC0003DMT400023467 | Potato | nucleus | 46.53 | 47.12 |
Solyc03g083100.2.1 | Tomato | nucleus | 46.11 | 46.7 |
Solyc06g052010.1.1 | Tomato | cytosol | 34.74 | 41.56 |
GSMUA_Achr10P... | Banana | cytosol | 38.74 | 40.71 |
PGSC0003DMT400050471 | Potato | cytosol | 34.53 | 40.29 |
CDX96427 | Canola | cytosol | 14.53 | 28.4 |
CDY11238 | Canola | cytosol, plastid | 23.79 | 27.36 |
CDY23202 | Canola | cytosol | 25.47 | 27.19 |
CDX95328 | Canola | cytosol | 25.47 | 27.19 |
CDX77034 | Canola | cytosol | 22.53 | 27.02 |
CDY04876 | Canola | nucleus, plastid | 25.05 | 26.74 |
CDY35313 | Canola | nucleus | 22.32 | 26.7 |
CDX72935 | Canola | cytosol | 14.74 | 26.62 |
CDX80849 | Canola | cytosol, plastid | 23.58 | 26.29 |
CDX92933 | Canola | cytosol, plastid | 22.11 | 26.18 |
CDY05931 | Canola | nucleus | 19.37 | 26.14 |
CDY37387 | Canola | cytosol | 21.05 | 26.04 |
CDY24286 | Canola | cytosol | 22.11 | 25.99 |
CDY10618 | Canola | cytosol | 21.89 | 25.62 |
CDY08131 | Canola | nucleus | 18.53 | 25.58 |
CDY55696 | Canola | nucleus, plastid | 23.37 | 25.4 |
CDY27925 | Canola | plastid | 14.11 | 25.28 |
CDY17214 | Canola | cytosol, plastid | 14.11 | 25.28 |
CDY48305 | Canola | nucleus | 19.79 | 25.07 |
CDY26241 | Canola | nucleus | 19.79 | 25.07 |
CDY10410 | Canola | cytosol, plastid | 23.37 | 25.0 |
CDX70333 | Canola | cytosol | 23.37 | 23.12 |
CDY62768 | Canola | cytosol | 13.47 | 23.1 |
CDY38525 | Canola | cytosol | 19.79 | 22.76 |
CDY39505 | Canola | cytosol | 18.53 | 22.28 |
CDY15200 | Canola | nucleus | 23.58 | 21.92 |
CDX90011 | Canola | nucleus | 22.95 | 21.46 |
CDY32322 | Canola | cytosol, plastid | 11.58 | 21.24 |
CDY69140 | Canola | mitochondrion, nucleus | 23.37 | 21.14 |
CDX91859 | Canola | mitochondrion, nucleus | 23.58 | 21.13 |
CDY58749 | Canola | cytosol | 20.21 | 21.05 |
CDY05111 | Canola | nucleus | 18.95 | 20.98 |
CDY20099 | Canola | cytosol | 11.58 | 20.83 |
CDX90766 | Canola | nucleus | 18.53 | 20.42 |
CDY05984 | Canola | nucleus | 21.05 | 20.2 |
CDY23391 | Canola | cytosol | 19.58 | 20.17 |
CDX71881 | Canola | nucleus | 20.84 | 20.04 |
CDY30433 | Canola | cytosol | 18.74 | 19.78 |
CDX83237 | Canola | cytosol | 20.84 | 19.53 |
CDX92931 | Canola | mitochondrion, nucleus | 9.26 | 17.25 |
CDX96426 | Canola | nucleus, plastid | 3.58 | 16.67 |
CDX72934 | Canola | nucleus, plastid | 3.58 | 16.67 |
CDX83468 | Canola | plasma membrane | 18.74 | 16.15 |
CDX73992 | Canola | nucleus | 16.0 | 15.93 |
CDY07937 | Canola | nucleus | 16.0 | 15.9 |
CDX79809 | Canola | nucleus | 20.0 | 15.89 |
CDY22198 | Canola | cytosol | 18.32 | 15.56 |
CDY41307 | Canola | cytosol | 17.89 | 15.54 |
CDY66694 | Canola | nucleus | 19.58 | 15.53 |
CDY44247 | Canola | nucleus | 18.11 | 15.47 |
CDY24282 | Canola | mitochondrion | 9.68 | 15.08 |
Protein Annotations
EnsemblPlants:CDY05917 | EnsemblPlantsGene:GSBRNA2T00121724001 | Gene3D:1.20.5.190 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
InterPro:DUF4005 | InterPro:IPR000048 | InterPro:IQ_motif_EF-hand-BS | ncoils:Coil | PANTHER:PTHR32295 | PANTHER:PTHR32295:SF33 |
PFAM:PF00612 | PFAM:PF13178 | PFscan:PS50096 | ProteinID:CDY05917 | ProteinID:CDY05917.1 | SEG:seg |
SMART:SM00015 | UniParc:UPI0004EED59E | MapMan:35.2 | : | : | : |
Description
BnaC08g20940D
Coordinates
chrLK031966:+:517684..521968
Molecular Weight (calculated)
52548.8 Da
IEP (calculated)
10.481
GRAVY (calculated)
-0.824
Length
475 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKKGSGGWF STVKKVFRSS PKDSKRENNI SNNTAVRWQQ QHDTQEVVSF ENFPAGSSPE ISHDVESTAS TPATTVGERK HALAVAIATA AAAEAAVAAA
101: QAAAKVVRLA GYNRQTEEDT AAVLIQSHYR GYLARRALRA LKGLVRLQAL VRGNHVRKQA QMTMKCMQAL VRVQGRVRAR RLQVAHDRFK KQFQEEERRS
201: GMEKPNIGST NLQTEREKPK KLHEVNRTSL YQTPGKEKEK SEGMMKRERA LAYAYTYQRQ MQHTYDDETI GFSVNGLDRT QWGWNWLDHW MSSQPYTGRQ
301: TGPGSSPGPG PYNPPPYPPF PTAAATTAGT TTPDDVSEKT VEMDVTTPTS LKDRIIGLTD REYIDFGSYR PAHKQRKSPS HIPSYMTPTA SAKAKVRDQD
401: TTVKIQGTSF MPYWNSSTKN GSINGSGCDS SSSGGVVATG YPGPRSPIPK MDFRKPVSPS QSPTGVGKRG WRHDL
101: QAAAKVVRLA GYNRQTEEDT AAVLIQSHYR GYLARRALRA LKGLVRLQAL VRGNHVRKQA QMTMKCMQAL VRVQGRVRAR RLQVAHDRFK KQFQEEERRS
201: GMEKPNIGST NLQTEREKPK KLHEVNRTSL YQTPGKEKEK SEGMMKRERA LAYAYTYQRQ MQHTYDDETI GFSVNGLDRT QWGWNWLDHW MSSQPYTGRQ
301: TGPGSSPGPG PYNPPPYPPF PTAAATTAGT TTPDDVSEKT VEMDVTTPTS LKDRIIGLTD REYIDFGSYR PAHKQRKSPS HIPSYMTPTA SAKAKVRDQD
401: TTVKIQGTSF MPYWNSSTKN GSINGSGCDS SSSGGVVATG YPGPRSPIPK MDFRKPVSPS QSPTGVGKRG WRHDL
001: MGKKGSGGWF STVKKKVFKS SPKDSKRENN IGSNNADIWQ QQHDTQEVVS FEHFPAESSP EISHDVESTA STPATNVGDR KHAMAVAIAT AAAAEAAVAA
101: AQAAAKVVRL AGYNRQTEED SAAVLIQSHY RGYLARRALR ALKGLVRLQA LVRGNHVRKQ AQMTMKCMQA LVRVQGRVRA RRLQVAHDRF KKQFEEEEKR
201: SGMEKPNKGF ANLKTEREKP KKLHEVNRTS LYQTQGKEKE RSEGMMKRER ALAYAYTYQR QMQHTNSEEG IGLSSNGPDR NQWAWNWLDH WMSSQPYTGR
301: QTGPGPGPGQ YNPPPYPPFP TAAATTTSDD VSEKTVEMDV TTPTSLKGNI IGLIDREYID LGSYRQGHKQ RKSPTHIPSY MAPTASAKAK VRDQGPTVKL
401: QGTSFMPYWN SSTKNGSVNG SGCDSSSSGG AITTGYPGPR SPNPKSDIRR KPVSPSQSPT GFGKRGWRHD H
101: AQAAAKVVRL AGYNRQTEED SAAVLIQSHY RGYLARRALR ALKGLVRLQA LVRGNHVRKQ AQMTMKCMQA LVRVQGRVRA RRLQVAHDRF KKQFEEEEKR
201: SGMEKPNKGF ANLKTEREKP KKLHEVNRTS LYQTQGKEKE RSEGMMKRER ALAYAYTYQR QMQHTNSEEG IGLSSNGPDR NQWAWNWLDH WMSSQPYTGR
301: QTGPGPGPGQ YNPPPYPPFP TAAATTTSDD VSEKTVEMDV TTPTSLKGNI IGLIDREYID LGSYRQGHKQ RKSPTHIPSY MAPTASAKAK VRDQGPTVKL
401: QGTSFMPYWN SSTKNGSVNG SGCDSSSSGG AITTGYPGPR SPNPKSDIRR KPVSPSQSPT GFGKRGWRHD H
Arabidopsis Description
iqd21IQ-domain 21 [Source:UniProtKB/TrEMBL;Acc:F4IWT1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.