CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, endoplasmic reticulum, nucleus, cytosol

Predictor Summary:

nucleus 3
plasma membrane 1
mitochondrion 3
endoplasmic reticulum 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH53505	Soybean	cytosol	63.97	65.7
KRH64435	Soybean	nucleus	66.38	65.66
VIT_16s0098g01790.t01	Wine grape	cytosol, endoplasmic reticulum, nucleus	60.04	59.52
PGSC0003DMT400023467	Potato	nucleus	56.77	55.44
Solyc03g083100.2.1	Tomato	nucleus	56.33	55.01
AT3G49260.3	Thale cress	nucleus	50.66	49.15
PGSC0003DMT400050471	Potato	cytosol	42.58	47.91
CDY05917	Canola	mitochondrion, nucleus	48.91	47.16
Bra017997.1-P	Field mustard	nucleus, plastid	48.47	46.74
Solyc06g052010.1.1	Tomato	cytosol	39.74	45.84
CDY08120	Canola	mitochondrion, nucleus	46.94	45.36
GSMUA_Achr10P...	Banana	cytosol	44.1	44.69
CDX86983	Canola	nucleus	46.07	44.42
Bra019589.1-P	Field mustard	nucleus	45.2	43.58
CDY00196	Canola	nucleus	45.2	43.58
CDY05918	Canola	mitochondrion	25.55	37.26
KRH57858	Soybean	cytosol	30.57	30.84
KRH04761	Soybean	cytosol	31.22	29.61
KRG95941	Soybean	nucleus	29.04	27.88
KRH26707	Soybean	cytosol	25.33	27.49
KRH67648	Soybean	nucleus	28.6	27.46
KRH22612	Soybean	cytosol	25.33	27.29
KRH05433	Soybean	cytosol	24.24	26.88
KRH15576	Soybean	cytosol	24.24	26.62
KRH21320	Soybean	cytosol	17.03	26.09
KRH10977	Soybean	cytosol	17.47	25.97
KRH19825	Soybean	cytosol	26.64	25.96
KRH06386	Soybean	mitochondrion, nucleus	31.0	25.82
KRH32420	Soybean	cytosol	26.64	25.74
KRH50151	Soybean	cytosol	16.16	25.52
KRH47821	Soybean	nucleus	30.35	25.46
KRH39086	Soybean	cytosol	24.02	25.35
KRH61522	Soybean	cytosol	24.89	25.33
KRH52206	Soybean	cytosol	24.89	25.33
KRH32840	Soybean	mitochondrion, nucleus	7.21	25.0
KRH20344	Soybean	cytosol	16.16	24.92
KRH34906	Soybean	cytosol	25.33	24.02
KRG91856	Soybean	cytosol	25.11	23.52
KRH10035	Soybean	cytosol	21.18	23.32
KRH55128	Soybean	mitochondrion, nucleus	15.07	23.31
KRH23285	Soybean	nucleus	20.96	23.3
KRH44124	Soybean	mitochondrion	21.18	23.04
KRH27315	Soybean	cytosol	14.63	22.79
KRH47099	Soybean	cytosol	22.27	22.13
KRH50198	Soybean	cytosol	25.33	21.76
KRH71267	Soybean	cytosol	24.89	21.31
KRH22000	Soybean	plastid	14.63	19.53
KRH37691	Soybean	mitochondrion	7.64	19.34

Protein Annotations

EMBL:ACUP02008901	EnsemblPlants:KRH16503	EnsemblPlantsGene:GLYMA_14G159300	EntrezGene:100798026	Gene3D:1.20.5.190	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:DUF4005	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR32295
PANTHER:PTHR32295:SF33	PFAM:PF00612	PFAM:PF13178	PFscan:PS50096	ProteinID:KRH16503	ProteinID:KRH16503.1
SEG:seg	SMART:SM00015	UniParc:UPI00023D42BA	UniProt:I1MAB5	MapMan:35.2	:

Description

hypothetical protein

Coordinates

chr14:-:35664116..35668868

Molecular Weight (calculated)

51329.3 Da

IEP (calculated)

10.575

GRAVY (calculated)

-0.856

Length

458 amino acids

Sequence
(BLAST)

001: MGKKGGSWFS SVKKVFKSSS KDSPQPEKKK DNTQKLQHEV AEVVSFEHFP AESSPDNVSN AEMSTTSTPV TNEDRSHAIA VAAATAAAAE AAVVAAQAAA
101: RVVRLAGSYG RQSKEERAAT LIQSYYRGYL ARRALRALKG LVRLQALVRG HNVRKQAQMT MRCMQALVRV QARVRARRFQ LSHADQEREK KEEPKPIPVP
201: VPMSPLRRID DINDWDNRRQ SSYKIKENDL RKHEAVMKRE RALAYAFNYQ QQQQKQFLQP DWNGNDDVGT NYEHEKAQWG WNWLERWMSS QPYNVRNMGP
301: HETSYMTLAS TTSTTTDNMS EKTVEMDMVA TPGPTNTRNV SPMNQDFVDL SPVSNRHRHI PPSPNRPSYM TPTQSAKAKV RAQGPSKPRV SVGQWNFSTK
401: GGSTGDSSSS GGRIVAYQFP RSPGPKINGI RSQSKRIVGS SPDYTEDWTL PLGAHGWA

Best Arabidopsis Sequence Match ( AT3G49260.1 )
(BLAST)

001: MGKKGSGGWF STVKKKVFKS SPKDSKRENN IGSNNADIWQ QQHDTQEVVS FEHFPAESSP EISHDVESTA STPATNVGDR KHAMAVAIAT AAAAEAAVAA
101: AQAAAKVVRL AGYNRQTEED SAAVLIQSHY RGYLARRALR ALKGLVRLQA LVRGNHVRKQ AQMTMKCMQA LVRVQGRVRA RRLQVAHDRF KKQFEEEEKR
201: SGMEKPNKGF ANLKTEREKP KKLHEVNRTS LYQTQGKEKE RSEGMMKRER ALAYAYTYQR QMQHTNSEEG IGLSSNGPDR NQWAWNWLDH WMSSQPYTGR
301: QTGPGPGPGQ YNPPPYPPFP TAAATTTSDD VSEKTVEMDV TTPTSLKGNI IGLIDREYID LGSYRQGHKQ RKSPTHIPSY MAPTASAKAK VRDQGPTVKL
401: QGTSFMPYWN SSTKNGSVNG SGCDSSSSGG AITTGYPGPR SPNPKSDIRR KPVSPSQSPT GFGKRGWRHD H

Arabidopsis Description

iqd21IQ-domain 21 [Source:UniProtKB/TrEMBL;Acc:F4IWT1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.