CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH23285	Soybean	nucleus	92.31	93.2
KRH44124	Soybean	mitochondrion	61.06	60.33
KRH47099	Soybean	cytosol	63.94	57.7
CDX72935	Canola	cytosol	31.73	50.19
KRH15576	Soybean	cytosol	45.43	45.32
KRH05433	Soybean	cytosol	44.95	45.28
Bra025971.1-P	Field mustard	nucleus	39.9	44.27
CDY26241	Canola	nucleus	39.9	44.27
AT1G72670.1	Thale cress	cytosol	43.99	44.2
CDY48305	Canola	nucleus	39.66	44.0
Bra016042.1-P	Field mustard	cytosol	43.27	43.69
AT1G17480.1	Thale cress	cytosol	38.94	43.67
KRH61522	Soybean	cytosol	46.39	42.89
KRH52206	Soybean	cytosol	45.91	42.44
PGSC0003DMT400006376	Potato	cytosol	43.27	42.15
Solyc03g121760.2.1	Tomato	cytosol	42.79	41.49
TraesCS3B01G280900.1	Wheat	cytosol	37.5	36.28
TraesCS3A01G251400.1	Wheat	cytosol	37.5	36.19
Os01t0708700-01	Rice	cytosol	38.22	36.05
EES03502	Sorghum	mitochondrion	37.5	35.7
Os05t0541100-01	Rice	plastid	34.86	35.54
TraesCS3D01G251800.2	Wheat	cytosol	37.74	35.44
Zm00001d043691_P001	Maize	mitochondrion	37.02	35.08
Zm00001d038861_P001	Maize	cytosol, plastid	36.06	34.97
TraesCS1B01G379600.1	Wheat	mitochondrion	33.17	33.17
HORVU3Hr1G066840.2	Barley	cytosol	33.65	32.86
TraesCS1A01G362400.1	Wheat	mitochondrion	31.73	32.27
KRH22612	Soybean	cytosol	30.53	29.88
TraesCS1D01G367300.2	Wheat	mitochondrion, plastid	32.21	29.71
KRH26707	Soybean	cytosol	29.57	29.15
KRH39086	Soybean	cytosol	30.05	28.8
KXG22437	Sorghum	mitochondrion, plastid	37.02	28.21
HORVU1Hr1G079590.12	Barley	cytosol	31.49	27.99
KRH32840	Soybean	mitochondrion, nucleus	7.93	25.0
KRH27315	Soybean	cytosol	17.55	24.83
KRH50151	Soybean	cytosol	17.31	24.83
KRH21320	Soybean	cytosol	17.55	24.41
KRH20344	Soybean	cytosol	16.83	23.57
KRH10977	Soybean	cytosol	17.31	23.38
KRH55128	Soybean	mitochondrion, nucleus	16.35	22.97
KRH19825	Soybean	cytosol	25.24	22.34
KRG95941	Soybean	nucleus	25.24	22.01
KRH32420	Soybean	cytosol	25.0	21.94
KRH67648	Soybean	nucleus	25.0	21.8
KRH53505	Soybean	cytosol	23.32	21.75
KRH64435	Soybean	nucleus	24.04	21.6
KRH57858	Soybean	cytosol	23.56	21.59
KRH16503	Soybean	cytosol, endoplasmic reticulum, mitochondrion, nucleus	23.32	21.18
KRH22000	Soybean	plastid	17.31	20.99
KRH04761	Soybean	cytosol	24.04	20.7
KRH34906	Soybean	cytosol	22.36	19.25
KRG91856	Soybean	cytosol	22.36	19.02
KRH37691	Soybean	mitochondrion	8.17	18.78
KRH06386	Soybean	mitochondrion, nucleus	24.04	18.18
KRH47821	Soybean	nucleus	23.8	18.13
KRH71267	Soybean	cytosol	20.19	15.7
KRH50198	Soybean	cytosol	19.95	15.57

Protein Annotations

EMBL:ACUP02009116	EnsemblPlants:KRH10035	EnsemblPlantsGene:GLYMA_15G025400	EntrezGene:100788715	Gene3D:1.20.5.190	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:DUF4005	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR32295
PANTHER:PTHR32295:SF86	PFAM:PF00612	PFAM:PF13178	PFscan:PS50096	ProteinID:KRH10035	ProteinID:KRH10035.1
SEG:seg	SMART:SM00015	UniParc:UPI000233B8C1	UniProt:K7M964	MapMan:35.2	:

Description

hypothetical protein

Coordinates

chr15:+:2051099..2053868

Molecular Weight (calculated)

45867.7 Da

IEP (calculated)

10.938

GRAVY (calculated)

-0.584

Length

416 amino acids

Sequence
(BLAST)

001: MGASGRWFKS LLPFRKTSTS TTDQDKGGDN KSKKKWKLWR ASSEGSMKKV GGGGGGAAAA SDSSLTYAVA VMVPKDFKLI KQEWAAIRIQ AVFRAFLARR
101: ALRALRAVVR LQAIFRGRLV RKQAAVTLRC MQALVRVQAR VRARNVRNSP EGKAVQKLLD EHRNQADPFN QIEQGWCDIP GTVDEVKAKL QMRQEGAIKR
201: DRAMAYSLST QSRLCASPNP KATKAMTPLK NNNLSNKSLG YSLLERWMEA KPWESPISRK SEGLVPAFQS RRNGMTTRVS VKPIITSQST SSSSAISSAE
301: YMCDDNSPVS TSYTSGSPSL PSTHTALVEA TEERDAHQPS YMSLTESTKA KLRACRSSSQ NSKRLVMEDS VSHSTTTGLM NGDTRSCSDS DPSVNLWKDS
401: CATTLRASYQ KRQIRI

Best Arabidopsis Sequence Match ( AT2G26180.1 )
(BLAST)

001: MGASGKWVKS IIGLKKLEKD EIEKGNGKNK KWKLWRTTSV DSWKGFRGKH RSDSDGVDSS TVYSAAVATV LRAPPKDFKA VREEWAAIRI QTAFRGFLAR
101: RALRALKGIV RLQALVRGRQ VRKQAAVTLR CMQALVRVQA RVRARRVRMT VEGQAVQKLL DEHRTKSDLL KEVEEGWCDR KGTVDDIKSK LQQRQEGAFK
201: RERALAYALA QKQWRSTTSS NLKTNSSISY LKSQEFDKNS WGWSWLERWM AARPWETRLM DTVDTAATPP PLPHKHLKSP ETADVVQVRR NNVTTRVSAK
301: PPPHMLSSSP GYEFNESSGS SSICTSTTPV SGKTGLVSDN SSSQAKKHKP SYMSLTESTK AKRRTNRGLR QSMDEFQFMK NSGMFTGELK TSPSSDPFVS
401: FSKPLGVPTR FEKPRG

Arabidopsis Description

IQD6At2g26180 [Source:UniProtKB/TrEMBL;Acc:O64852]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.