Factsheet for TraesCS1B01G379600.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G362400.1	Wheat	mitochondrion	93.27	94.87
TraesCS1D01G367300.2	Wheat	mitochondrion, plastid	95.43	88.03
HORVU1Hr1G079590.12	Barley	cytosol	89.42	79.49
Os05t0541100-01	Rice	plastid	62.26	63.48
Zm00001d038861_P001	Maize	cytosol, plastid	59.62	57.81
TraesCS3B01G280900.1	Wheat	cytosol	56.97	55.12
KXG22437	Sorghum	mitochondrion, plastid	64.66	49.27
TraesCS3B01G124000.1	Wheat	cytosol	37.74	36.18
CDX72935	Canola	cytosol	22.12	34.98
AT1G17480.1	Thale cress	cytosol	30.29	33.96
Solyc03g121760.2.1	Tomato	cytosol	34.62	33.57
PGSC0003DMT400006376	Potato	cytosol	34.38	33.49
Bra025971.1-P	Field mustard	nucleus	30.05	33.33
CDY26241	Canola	nucleus	30.05	33.33
KRH10035	Soybean	cytosol	33.17	33.17
CDY48305	Canola	nucleus	29.33	32.53
KRH23285	Soybean	nucleus	31.73	32.04
AT1G72670.1	Thale cress	cytosol	31.73	31.88
Bra016042.1-P	Field mustard	cytosol	30.77	31.07
KRH44124	Soybean	mitochondrion	30.53	30.17
KRH47099	Soybean	cytosol	31.73	28.63
TraesCS5B01G427800.1	Wheat	cytosol, mitochondrion	24.52	23.72
TraesCS5B01G028200.1	Wheat	nucleus	24.04	22.57
TraesCS5B01G375000.1	Wheat	nucleus	23.32	22.25
TraesCS1B01G082100.1	Wheat	cytosol	24.76	21.46
TraesCS7B01G010100.1	Wheat	nucleus	16.11	20.49
TraesCS3B01G385100.1	Wheat	cytosol	24.52	20.44
TraesCS7B01G218800.3	Wheat	nucleus	25.0	19.08
TraesCS3B01G603500.1	Wheat	cytosol, mitochondrion	23.32	18.44
TraesCS1B01G297500.1	Wheat	cytosol	21.88	17.23
TraesCS3B01G431200.1	Wheat	cytosol	20.67	13.74

Protein Annotations

EnsemblPlants:TraesCS1B01G379600.1	EnsemblPlantsGene:TraesCS1B01G379600	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000048
InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR32295	PANTHER:PTHR32295:SF34	PFAM:PF00612	PFscan:PS50096	SEG:seg
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chr1B:+:612863412..612866117

Molecular Weight (calculated)

45418.4 Da

IEP (calculated)

11.230

GRAVY (calculated)

-0.736

Length

416 amino acids

Sequence
(BLAST)

001: MGKWIKSLVG LKAPSASAAP GKGRKWSRLW RSGSSSASRD GAGGCEASST TSSASGIGSV VAAVARAPPR DFRVIRQEWA AIRIQAAFRA LLARRALKAL
101: RGIVRLQALV RGRLVRRQLA VTLSRMEALL RVQERAMERR ARCSADAHSQ DAPGDRNGRA DPLRETEERW CDRQGSVNQV KSRMHMKHEG AVKRQRAIAY
201: AHSHQGRSSR YSGRSSSPAS SLRNHESYIE GWMATKPWES THMDSNLGES RRLHSYKEKM NFEDSKYSCA GSIKIRRNND STRVETMPPP ALSASSSDFG
301: CDESSPSTSS VTPGYSTNTL ASEARSDGGG GPGYMSLTKA AKARLEDVGG SRRGPFQLQR QRSGGVPYYS RRVALSSLDS ESNAGSDVSA AARRLNSLSL
401: KGQSMTRSLD KENYNY

Best Arabidopsis Sequence Match ( AT1G72670.1 )
(BLAST)

001: MGGSGNWIKS LITNKKNITD DQEKNIKKKW KLWRTSSEGL ISSSKGFKSR GGSYGTPSLG SDPPSFSADD SFTAAVAAVI RAPPKDFFLV KREWAATRIQ
101: AAFRAFLARQ ALRALKAVVR IQAIFRGRQV RKQADVTLRC MQALVRVQAR VRAHCNRGPS DGQELEKPSD QQKDDPAKQA EKGWCDSPGS INEVRTKLQM
201: RQEGAIKRER AMVYALTHQP RTCPSPAKAS KQGSVKKNNG SCKSSPGWNW LDRWVADRPW EGRLMEGPTN SSENARKSES SVSEHDTVQV RKNNLTTRVL
301: ARPPPMSSSA TSSESSSTSQ SPVPFSGSFL EEGGYYRKPS YMSLTQSIKA KQRRSGSSSS CSKTPFEKKQ SMSYNGDVNV RRSAGSDPLN NQWTDLYPPA
401: QVTGRHMWAK SQRG

Arabidopsis Description

iqd8At1g72670 [Source:UniProtKB/TrEMBL;Acc:Q9CAI2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.