Factsheet for TraesCS1A01G362400.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 6
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G379600.1	Wheat	mitochondrion	94.87	93.27
TraesCS1D01G367300.2	Wheat	mitochondrion, plastid	96.58	87.58
HORVU1Hr1G079590.12	Barley	cytosol	90.22	78.85
Os05t0541100-01	Rice	plastid	61.61	61.76
Zm00001d038861_P001	Maize	cytosol, plastid	58.92	56.18
TraesCS3A01G251400.1	Wheat	cytosol	56.97	54.06
KXG22437	Sorghum	mitochondrion, plastid	64.06	47.99
TraesCS3A01G105600.1	Wheat	cytosol, nucleus, peroxisome	37.16	34.7
CDX72935	Canola	cytosol	21.03	32.7
AT1G17480.1	Thale cress	cytosol	29.58	32.61
Solyc03g121760.2.1	Tomato	cytosol	33.74	32.17
PGSC0003DMT400006376	Potato	cytosol	33.5	32.08
Bra025971.1-P	Field mustard	nucleus	29.34	32.0
CDY26241	Canola	nucleus	29.34	32.0
KRH10035	Soybean	cytosol	32.27	31.73
CDY48305	Canola	nucleus	28.61	31.2
KRH23285	Soybean	nucleus	30.81	30.58
AT1G72670.1	Thale cress	cytosol	30.81	30.43
Bra016042.1-P	Field mustard	cytosol	29.83	29.61
KRH44124	Soybean	mitochondrion	29.34	28.5
KRH47099	Soybean	cytosol	30.56	27.11
TraesCS5A01G425800.1	Wheat	cytosol, mitochondrion	24.21	23.02
TraesCS5A01G029600.3	Wheat	nucleus	24.21	22.81
TraesCS5A01G373000.1	Wheat	nucleus	23.72	22.25
TraesCS1A01G064100.1	Wheat	cytosol	24.94	21.25
TraesCS7A01G112000.1	Wheat	nucleus	16.63	20.8
TraesCS3A01G352500.1	Wheat	cytosol	25.18	20.64
TraesCS7A01G317400.2	Wheat	nucleus	24.45	18.38
TraesCS3A01G538100.1	Wheat	cytosol, mitochondrion	23.23	17.89
TraesCS1A01G288100.2	Wheat	nucleus	22.25	17.47
TraesCS3A01G398900.1	Wheat	cytosol	20.78	13.64

Protein Annotations

EnsemblPlants:TraesCS1A01G362400.1	EnsemblPlantsGene:TraesCS1A01G362400	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000048
InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR32295	PANTHER:PTHR32295:SF34	PFAM:PF00612	PFscan:PS50096	SEG:seg
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chr1A:+:543060578..543063390

Molecular Weight (calculated)

44717.6 Da

IEP (calculated)

11.261

GRAVY (calculated)

-0.721

Length

409 amino acids

Sequence
(BLAST)

001: MGKWIRSLVG LKAPSASAAP GKGRKWSRLW RGASRDGAGG CETSSTTSSA TALGSVVARA PPADFRVIRQ EWAAVRIQAA FRALLARRAL KALRGIVRLQ
101: ALVRGRLVRR QLAVTLSRME ALLRVQERAM ERRARCSADA QSQDAPGHRD GRADPLRETE GRWCDRQGSV NQVKSRMHMK HEGAVKRQRA IAYAHSHQRG
201: SSRYSGRSSS PASSLRNHES YIEGWMATKP WESTHMDSNI GESRRLHSYK ETMNFEDSKY SCAGSTKIRR NNDSTRVEAM PPPALSASSS DFGCDESSPS
301: TSSVTPGYST NTLASEARSD SGGGPGYMSL TKAAKARLED IGGSRRGPFQ LQRQRSGGVP YYSRRVALSS LDSESNAGSD VSAAARRLNS LSLKGLSMTR
401: SLDKENYNY

Best Arabidopsis Sequence Match ( AT1G72670.1 )
(BLAST)

001: MGGSGNWIKS LITNKKNITD DQEKNIKKKW KLWRTSSEGL ISSSKGFKSR GGSYGTPSLG SDPPSFSADD SFTAAVAAVI RAPPKDFFLV KREWAATRIQ
101: AAFRAFLARQ ALRALKAVVR IQAIFRGRQV RKQADVTLRC MQALVRVQAR VRAHCNRGPS DGQELEKPSD QQKDDPAKQA EKGWCDSPGS INEVRTKLQM
201: RQEGAIKRER AMVYALTHQP RTCPSPAKAS KQGSVKKNNG SCKSSPGWNW LDRWVADRPW EGRLMEGPTN SSENARKSES SVSEHDTVQV RKNNLTTRVL
301: ARPPPMSSSA TSSESSSTSQ SPVPFSGSFL EEGGYYRKPS YMSLTQSIKA KQRRSGSSSS CSKTPFEKKQ SMSYNGDVNV RRSAGSDPLN NQWTDLYPPA
401: QVTGRHMWAK SQRG

Arabidopsis Description

iqd8At1g72670 [Source:UniProtKB/TrEMBL;Acc:Q9CAI2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.