Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 1
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX96427 | Canola | cytosol | 90.87 | 98.35 |
| Bra016042.1-P | Field mustard | cytosol | 90.49 | 57.77 |
| AT1G72670.1 | Thale cress | cytosol | 83.27 | 52.9 |
| CDY26241 | Canola | nucleus | 67.68 | 47.47 |
| CDY48305 | Canola | nucleus | 66.54 | 46.67 |
| Solyc03g121760.2.1 | Tomato | cytosol | 52.85 | 32.4 |
| PGSC0003DMT400006376 | Potato | cytosol | 52.09 | 32.08 |
| CDX77034 | Canola | cytosol | 48.29 | 32.07 |
| CDY35313 | Canola | nucleus | 47.91 | 31.74 |
| KRH10035 | Soybean | cytosol | 50.19 | 31.73 |
| KRH23285 | Soybean | nucleus | 48.29 | 30.83 |
| KRH44124 | Soybean | mitochondrion | 46.39 | 28.98 |
| KRH47099 | Soybean | cytosol | 49.05 | 27.98 |
| Os05t0541100-01 | Rice | plastid | 42.59 | 27.45 |
| TraesCS3B01G280900.1 | Wheat | cytosol | 42.59 | 26.05 |
| TraesCS3A01G251400.1 | Wheat | cytosol | 42.59 | 25.99 |
| TraesCS3D01G251800.2 | Wheat | cytosol | 42.97 | 25.51 |
| Os01t0708700-01 | Rice | cytosol | 42.59 | 25.4 |
| Zm00001d038861_P001 | Maize | cytosol, plastid | 40.68 | 24.94 |
| CDY37387 | Canola | cytosol | 36.12 | 24.74 |
| EES03502 | Sorghum | mitochondrion | 41.06 | 24.71 |
| Zm00001d043691_P001 | Maize | mitochondrion | 40.68 | 24.37 |
| CDY24286 | Canola | cytosol | 36.88 | 24.01 |
| CDX92933 | Canola | cytosol, plastid | 36.12 | 23.69 |
| CDY10618 | Canola | cytosol | 36.5 | 23.65 |
| CDY39505 | Canola | cytosol | 35.36 | 23.54 |
| CDY32322 | Canola | cytosol, plastid | 22.81 | 23.17 |
| HORVU3Hr1G066840.2 | Barley | cytosol | 36.88 | 22.77 |
| CDY20099 | Canola | cytosol | 22.81 | 22.73 |
| CDY27925 | Canola | plastid | 22.43 | 22.26 |
| CDY17214 | Canola | cytosol, plastid | 22.43 | 22.26 |
| TraesCS1B01G379600.1 | Wheat | mitochondrion | 34.98 | 22.12 |
| CDY58749 | Canola | cytosol | 36.5 | 21.05 |
| TraesCS1A01G362400.1 | Wheat | mitochondrion | 32.7 | 21.03 |
| KXG22437 | Sorghum | mitochondrion, plastid | 41.06 | 19.78 |
| TraesCS1D01G367300.2 | Wheat | mitochondrion, plastid | 33.84 | 19.73 |
| CDY62768 | Canola | cytosol | 20.53 | 19.49 |
| HORVU1Hr1G079590.12 | Barley | cytosol | 33.46 | 18.8 |
| CDY05931 | Canola | nucleus | 22.05 | 16.48 |
| CDY08131 | Canola | nucleus | 21.29 | 16.28 |
| CDY11238 | Canola | cytosol, plastid | 25.48 | 16.22 |
| CDX80849 | Canola | cytosol, plastid | 25.48 | 15.73 |
| CDY05111 | Canola | nucleus | 25.1 | 15.38 |
| CDX90766 | Canola | nucleus | 25.1 | 15.31 |
| CDY04876 | Canola | nucleus, plastid | 25.86 | 15.28 |
| CDY55696 | Canola | nucleus, plastid | 25.1 | 15.1 |
| CDY30433 | Canola | cytosol | 25.48 | 14.89 |
| CDY23202 | Canola | cytosol | 25.1 | 14.83 |
| CDY08120 | Canola | mitochondrion, nucleus | 26.62 | 14.77 |
| CDY05917 | Canola | mitochondrion, nucleus | 26.62 | 14.74 |
| CDX95328 | Canola | cytosol | 24.71 | 14.61 |
| CDY10410 | Canola | cytosol, plastid | 24.33 | 14.41 |
| CDX86983 | Canola | nucleus | 25.86 | 14.32 |
| CDX92931 | Canola | mitochondrion, nucleus | 13.69 | 14.12 |
| CDY38525 | Canola | cytosol | 22.05 | 14.04 |
| CDY00196 | Canola | nucleus | 25.1 | 13.89 |
| CDY23391 | Canola | cytosol | 23.95 | 13.67 |
| CDY15200 | Canola | nucleus | 26.24 | 13.5 |
| CDX90011 | Canola | nucleus | 25.86 | 13.39 |
| CDX70333 | Canola | cytosol | 24.33 | 13.33 |
| CDY05984 | Canola | nucleus | 25.1 | 13.33 |
| CDX71881 | Canola | nucleus | 24.33 | 12.96 |
| CDX91859 | Canola | mitochondrion, nucleus | 25.86 | 12.83 |
| CDY69140 | Canola | mitochondrion, nucleus | 25.48 | 12.76 |
| CDX83237 | Canola | cytosol | 22.05 | 11.44 |
| CDY24282 | Canola | mitochondrion | 12.93 | 11.15 |
| CDX83468 | Canola | plasma membrane | 22.81 | 10.89 |
| CDY44247 | Canola | nucleus | 22.81 | 10.79 |
| CDX73992 | Canola | nucleus | 19.39 | 10.69 |
| CDY07937 | Canola | nucleus | 19.01 | 10.46 |
| CDY22198 | Canola | cytosol | 22.05 | 10.38 |
| CDY41307 | Canola | cytosol | 21.29 | 10.24 |
| CDX79809 | Canola | nucleus | 22.43 | 9.87 |
| CDY66694 | Canola | nucleus | 22.43 | 9.85 |
| CDY05918 | Canola | mitochondrion | 11.41 | 9.55 |
| CDX96426 | Canola | nucleus, plastid | 2.28 | 5.88 |
| CDX72934 | Canola | nucleus, plastid | 2.28 | 5.88 |
Protein Annotations
| EnsemblPlants:CDX72935 | EnsemblPlantsGene:GSBRNA2T00103360001 | Gene3D:1.20.5.190 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR000048 | InterPro:IQ_motif_EF-hand-BS | InterPro:P-loop_NTPase | PANTHER:PTHR32295 | PANTHER:PTHR32295:SF25 | PFAM:PF00612 |
| PFscan:PS50096 | ProteinID:CDX72935 | ProteinID:CDX72935.1 | SEG:seg | SMART:SM00015 | SUPFAM:SSF52540 |
| UniParc:UPI0004EF0847 | MapMan:35.2 | : | : | : | : |
Description
BnaC06g33830D
Coordinates
chrLK031797:-:1216056..1217399
Molecular Weight (calculated)
29543.5 Da
IEP (calculated)
11.384
GRAVY (calculated)
-0.769
Length
263 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGSGNWIKS LISNKKPITD DHQLGDKNSK KKWKLWRTSS ESFISSSKGF KSRAGSYGTP SLGSDPPSFS ADDSFAASVA AVIRAPPKDF LLVKREWAAT
101: RIQAAFRSFL ARQALRALKA VVRIQAIFRG RQVRKQADVT LRCMQALVRV QARVRAHCNR APSDGQELEK PSEEKNDPAK QAEKGWCDSP GSVNEVRTKL
201: QMRQEGAIKR ERAMVYALTH QPRTCPSPNA KMGCRQAMGR AVDGRWSHKL IRQQRKEKRE QRV
101: RIQAAFRSFL ARQALRALKA VVRIQAIFRG RQVRKQADVT LRCMQALVRV QARVRAHCNR APSDGQELEK PSEEKNDPAK QAEKGWCDSP GSVNEVRTKL
201: QMRQEGAIKR ERAMVYALTH QPRTCPSPNA KMGCRQAMGR AVDGRWSHKL IRQQRKEKRE QRV
001: MGGSGNWIKS LITNKKNITD DQEKNIKKKW KLWRTSSEGL ISSSKGFKSR GGSYGTPSLG SDPPSFSADD SFTAAVAAVI RAPPKDFFLV KREWAATRIQ
101: AAFRAFLARQ ALRALKAVVR IQAIFRGRQV RKQADVTLRC MQALVRVQAR VRAHCNRGPS DGQELEKPSD QQKDDPAKQA EKGWCDSPGS INEVRTKLQM
201: RQEGAIKRER AMVYALTHQP RTCPSPAKAS KQGSVKKNNG SCKSSPGWNW LDRWVADRPW EGRLMEGPTN SSENARKSES SVSEHDTVQV RKNNLTTRVL
301: ARPPPMSSSA TSSESSSTSQ SPVPFSGSFL EEGGYYRKPS YMSLTQSIKA KQRRSGSSSS CSKTPFEKKQ SMSYNGDVNV RRSAGSDPLN NQWTDLYPPA
401: QVTGRHMWAK SQRG
101: AAFRAFLARQ ALRALKAVVR IQAIFRGRQV RKQADVTLRC MQALVRVQAR VRAHCNRGPS DGQELEKPSD QQKDDPAKQA EKGWCDSPGS INEVRTKLQM
201: RQEGAIKRER AMVYALTHQP RTCPSPAKAS KQGSVKKNNG SCKSSPGWNW LDRWVADRPW EGRLMEGPTN SSENARKSES SVSEHDTVQV RKNNLTTRVL
301: ARPPPMSSSA TSSESSSTSQ SPVPFSGSFL EEGGYYRKPS YMSLTQSIKA KQRRSGSSSS CSKTPFEKKQ SMSYNGDVNV RRSAGSDPLN NQWTDLYPPA
401: QVTGRHMWAK SQRG
Arabidopsis Description
iqd8At1g72670 [Source:UniProtKB/TrEMBL;Acc:Q9CAI2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.