Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 2
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY20099 | Canola | cytosol | 95.37 | 93.56 |
| AT3G15050.1 | Thale cress | plastid | 81.47 | 81.47 |
| CDY27925 | Canola | plastid | 47.1 | 46.04 |
| CDY17214 | Canola | cytosol, plastid | 47.1 | 46.04 |
| CDY62768 | Canola | cytosol | 46.72 | 43.68 |
| Solyc12g014130.1.1 | Tomato | nucleus | 43.24 | 42.91 |
| KRH55128 | Soybean | mitochondrion, nucleus | 48.26 | 42.23 |
| KRH27315 | Soybean | cytosol | 47.88 | 42.18 |
| VIT_19s0014g01690.t01 | Wine grape | cytosol | 50.19 | 42.07 |
| GSMUA_Achr6P14440_001 | Banana | nucleus | 27.41 | 41.52 |
| PGSC0003DMT400039646 | Potato | mitochondrion | 46.33 | 40.54 |
| GSMUA_Achr2P20050_001 | Banana | nucleus | 45.56 | 39.86 |
| HORVU7Hr1G024060.1 | Barley | plastid | 24.71 | 36.36 |
| KRH22000 | Soybean | plastid | 47.49 | 35.86 |
| EER87873 | Sorghum | nucleus | 45.17 | 35.14 |
| Zm00001d045305_P001 | Maize | nucleus | 44.79 | 34.63 |
| TraesCS7A01G112000.1 | Wheat | nucleus | 42.08 | 33.33 |
| HORVU7Hr1G023980.1 | Barley | nucleus | 42.08 | 33.33 |
| TraesCS7D01G107600.2 | Wheat | nucleus | 41.7 | 33.03 |
| TraesCS7B01G010100.1 | Wheat | nucleus | 41.31 | 32.72 |
| Os06t0155300-01 | Rice | plasma membrane | 44.4 | 32.58 |
| Zm00001d009320_P001 | Maize | nucleus | 23.94 | 26.84 |
| CDX96427 | Canola | cytosol | 22.78 | 24.28 |
| CDX72935 | Canola | cytosol | 23.17 | 22.81 |
| CDY37387 | Canola | cytosol | 32.82 | 22.14 |
| CDX77034 | Canola | cytosol | 32.43 | 21.21 |
| CDY10618 | Canola | cytosol | 32.82 | 20.94 |
| CDY35313 | Canola | nucleus | 32.05 | 20.91 |
| CDY24286 | Canola | cytosol | 32.05 | 20.54 |
| CDX92933 | Canola | cytosol, plastid | 31.66 | 20.45 |
| CDX92931 | Canola | mitochondrion, nucleus | 18.15 | 18.43 |
| CDY58749 | Canola | cytosol | 32.43 | 18.42 |
| CDY38525 | Canola | cytosol | 28.96 | 18.16 |
| CDY11238 | Canola | cytosol, plastid | 28.57 | 17.92 |
| CDY39505 | Canola | cytosol | 26.64 | 17.47 |
| CDX80849 | Canola | cytosol, plastid | 28.57 | 17.37 |
| CDY10410 | Canola | cytosol, plastid | 27.8 | 16.22 |
| CDY23202 | Canola | cytosol | 27.8 | 16.18 |
| CDX95328 | Canola | cytosol | 27.8 | 16.18 |
| CDY55696 | Canola | nucleus, plastid | 27.03 | 16.02 |
| CDY04876 | Canola | nucleus, plastid | 27.41 | 15.96 |
| CDY24282 | Canola | mitochondrion | 18.53 | 15.74 |
| CDY48305 | Canola | nucleus | 22.39 | 15.47 |
| CDY26241 | Canola | nucleus | 22.39 | 15.47 |
| CDX70333 | Canola | cytosol | 27.8 | 15.0 |
| CDX83237 | Canola | cytosol | 28.57 | 14.6 |
| CDY05111 | Canola | nucleus | 23.17 | 13.99 |
| CDY08131 | Canola | nucleus | 18.53 | 13.95 |
| CDX90766 | Canola | nucleus | 23.17 | 13.92 |
| CDY30433 | Canola | cytosol | 23.94 | 13.78 |
| CDY05931 | Canola | nucleus | 18.53 | 13.64 |
| CDY05984 | Canola | nucleus | 25.1 | 13.13 |
| CDY22198 | Canola | cytosol | 28.19 | 13.06 |
| CDY41307 | Canola | cytosol | 27.41 | 12.98 |
| CDX71881 | Canola | nucleus | 24.71 | 12.96 |
| CDY23391 | Canola | cytosol | 22.78 | 12.8 |
| CDX73992 | Canola | nucleus | 23.55 | 12.79 |
| CDY07937 | Canola | nucleus | 23.17 | 12.55 |
| CDY15200 | Canola | nucleus | 24.32 | 12.33 |
| CDX90011 | Canola | nucleus | 23.94 | 12.2 |
| CDY69140 | Canola | mitochondrion, nucleus | 24.71 | 12.19 |
| CDX91859 | Canola | mitochondrion, nucleus | 24.32 | 11.89 |
| CDY05917 | Canola | mitochondrion, nucleus | 21.24 | 11.58 |
| CDY08120 | Canola | mitochondrion, nucleus | 20.85 | 11.39 |
| CDY00196 | Canola | nucleus | 20.46 | 11.16 |
| CDX86983 | Canola | nucleus | 20.08 | 10.95 |
| CDX83468 | Canola | plasma membrane | 22.39 | 10.53 |
| CDX79809 | Canola | nucleus | 23.94 | 10.37 |
| CDY66694 | Canola | nucleus | 23.94 | 10.35 |
| CDY44247 | Canola | nucleus | 22.01 | 10.25 |
| CDY05918 | Canola | mitochondrion | 10.04 | 8.28 |
| CDX96426 | Canola | nucleus, plastid | 0.77 | 1.96 |
| CDX72934 | Canola | nucleus, plastid | 0.77 | 1.96 |
Protein Annotations
| EnsemblPlants:CDY32322 | EnsemblPlantsGene:GSBRNA2T00051822001 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR000048 |
| InterPro:IQ_motif_EF-hand-BS | PANTHER:PTHR32295 | PANTHER:PTHR32295:SF93 | PFAM:PF00612 | PFscan:PS50096 | ProteinID:CDY32322 |
| ProteinID:CDY32322.1 | UniParc:UPI0004EDB856 | UniProt:A0A078H4A9 | MapMan:35.1 | : | : |
Description
BnaC01g36410DBnaC01g36410D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H4A9]
Coordinates
chrLK032292:+:118980..119923
Molecular Weight (calculated)
29803.0 Da
IEP (calculated)
11.107
GRAVY (calculated)
-0.694
Length
259 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSGWLLRSL ICFKAEKHTK SNQSNVHSET LNRVKPVESS SASTTLTVEI AAIRIQKAFR AYKARKRLCS LKSARRFNAL VQGHTVRNQT SIALNVMHSW
101: CDIQSQIRAR RIYMVTQGRL QNKRLENRLK LEIKLHEIEV EWCGGSETME EILARIQHRE EATVKRERAM AYAFSHQWRA NATQYLGQAS FNLDKENWGW
201: SWKERWIAAR PWEIRAQCQV TKPARKPEKL SPPNVATKKI SAKPGLPNTK EAAKSRKPG
101: CDIQSQIRAR RIYMVTQGRL QNKRLENRLK LEIKLHEIEV EWCGGSETME EILARIQHRE EATVKRERAM AYAFSHQWRA NATQYLGQAS FNLDKENWGW
201: SWKERWIAAR PWEIRAQCQV TKPARKPEKL SPPNVATKKI SAKPGLPNTK EAAKSRKPG
001: MGSGWLLRSI ICLNGTKKNK SNRGNVHSET SNRVKPVESS SAASTKLTVE VAVIRIQKAF RAFKARKRLC SLKSARRFNS LIQGHTVMNQ TSTALNVIHS
101: WYDIQNQIRA RRLYMVTQGR LQHKRLENRL KLEIKLHELE VEWCGGSETM EEILAKIQQK EEATVKRERA MAYAFSHQWR ANATQYLGQA SFNLGKESWG
201: WSWKERWIAA RPWEIRAQCY VVKPIKPSKK PEKSSPNNVI TKTSAKPDEV GNSKKPGSG
101: WYDIQNQIRA RRLYMVTQGR LQHKRLENRL KLEIKLHELE VEWCGGSETM EEILAKIQQK EEATVKRERA MAYAFSHQWR ANATQYLGQA SFNLGKESWG
201: WSWKERWIAA RPWEIRAQCY VVKPIKPSKK PEKSSPNNVI TKTSAKPDEV GNSKKPGSG
Arabidopsis Description
IQD10IQ-domain 10 [Source:UniProtKB/TrEMBL;Acc:Q9LKA0]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.