Factsheet for HORVU7Hr1G023980.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G112000.1	Wheat	nucleus	98.47	98.47
HORVU7Hr1G024060.1	Barley	plastid	52.91	98.3
TraesCS7D01G107600.2	Wheat	nucleus	97.55	97.55
TraesCS7B01G010100.1	Wheat	nucleus	96.94	96.94
EER87873	Sorghum	nucleus	75.84	74.47
Zm00001d045305_P001	Maize	nucleus	75.84	74.03
Os06t0155300-01	Rice	plasma membrane	78.29	72.52
Zm00001d009320_P001	Maize	nucleus	39.14	55.41
GSMUA_Achr6P14440_001	Banana	nucleus	23.24	44.44
GSMUA_Achr2P20050_001	Banana	nucleus	38.23	42.23
CDY32322	Canola	cytosol, plastid	33.33	42.08
VIT_19s0014g01690.t01	Wine grape	cytosol	39.76	42.07
Bra021588.1-P	Field mustard	cytosol, plastid	33.95	42.05
Solyc12g014130.1.1	Tomato	nucleus	33.03	41.38
AT3G15050.1	Thale cress	plastid	32.72	41.31
CDY20099	Canola	cytosol	33.33	41.29
KRH27315	Soybean	cytosol	35.78	39.8
PGSC0003DMT400039646	Potato	mitochondrion	35.17	38.85
KRH55128	Soybean	mitochondrion, nucleus	34.86	38.51
KRH22000	Soybean	plastid	36.09	34.4
HORVU5Hr1G007780.1	Barley	cytosol	26.3	20.05
HORVU5Hr1G092660.2	Barley	nucleus	25.38	18.95
HORVU3Hr1G066840.2	Barley	cytosol	23.85	18.31
HORVU1Hr1G013210.1	Barley	cytosol	25.69	17.36
HORVU3Hr1G019240.2	Barley	mitochondrion, peroxisome	25.69	16.97
HORVU3Hr1G087500.2	Barley	cytosol	25.38	16.63
HORVU1Hr1G071700.1	Barley	nucleus	22.63	14.4
HORVU1Hr1G079590.12	Barley	cytosol	20.18	14.1
HORVU3Hr1G117830.2	Barley	endoplasmic reticulum, extracellular	24.46	13.7
HORVU7Hr1G075720.1	Barley	plasma membrane	22.32	13.37
HORVU3Hr1G089690.1	Barley	cytosol	21.1	10.99

Protein Annotations

EnsemblPlants:HORVU7Hr1G023980.1	EnsemblPlantsGene:HORVU7Hr1G023980	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000048
InterPro:IQ_motif_EF-hand-BS	ncoils:Coil	PANTHER:PTHR32295	PANTHER:PTHR32295:SF93	PFscan:PS50096	SEG:seg
UniParc:UPI0002966F57	UniProt:M0US48	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chrchr7H:-:37802545..37806523

Molecular Weight (calculated)

36636.6 Da

IEP (calculated)

11.596

GRAVY (calculated)

-1.116

Length

327 amino acids

Sequence
(BLAST)

001: MGSGDWFKTI ISKKKSKRGK SKHAKKVAAQ RNGANLPQQK PSNAPSSSSD PEDNAALEDW AATRIQNAFR RHKARRTLRC LRGVKRLRIV GQSNPVTKQT
101: SATLSYIQSW NKLQAELRNR RAFMVTEGRN RKKKQENQVK LDAKLQNLQV AWNGGSNTMD EIVARIHLRE EAAVKRERAM AYAFNHQWRA KSATSQGNFN
201: YGVGNGGWGW SWMDRWIAAR PWEPRSMVTP ENPKKGQSKK DNASTNQSAL KLQGAISLSN NTNDRKVPKK KSSPSPDKKK PVAKTEQKPV AKTEQKPKVA
301: GPPKAKSNDM KRNQGKQQQP AVPAITA

Best Arabidopsis Sequence Match ( AT2G33990.1 )
(BLAST)

001: MGSGNLIKAI IRLKKSKQGT EKKKTSAVKP KKGSKKKGTS LVTRSEDWAA TRIQTAFKAY KARKSLRRLK GIARAKLSTE KQSVKNQAVV TLRYLHSWSK
101: IQSEIKARRV CMVTEWRLKN KRLEHQQKLE AKLHDVEVEW NGGSETKDEI LERILQREEA TIKRERALAY AFSHQWKADG KTQWLGSYEL GNTNWGWSWK
201: ERWISARPWE VRYSVTPKKP KSSKTDSNSP AKRTVSLSSV PAKTPFPGAR NTVKPRRLSF PGA

Arabidopsis Description

iqd9IQ-domain 9 [Source:UniProtKB/TrEMBL;Acc:Q0WNP8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.