Factsheet for HORVU5Hr1G092660.2

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G373000.1	Wheat	nucleus	92.69	93.12
TraesCS5B01G375000.1	Wheat	nucleus	91.78	92.2
TraesCS5D01G382500.1	Wheat	nucleus	91.78	91.78
Os03t0648300-01	Rice	cytosol	72.15	71.82
EER91163	Sorghum	cytosol	66.21	68.72
Zm00001d033211_P002	Maize	cytosol	65.98	67.37
HORVU5Hr1G007780.1	Barley	cytosol	54.79	55.94
GSMUA_Achr4P31410_001	Banana	cytosol	45.89	45.68
KRH26707	Soybean	cytosol	42.24	43.84
KRH22612	Soybean	cytosol	41.78	43.06
GSMUA_Achr5P02600_001	Banana	cytosol	43.15	43.05
Bra031331.1-P	Field mustard	cytosol	37.67	42.97
CDY37387	Canola	cytosol	37.44	42.71
CDX92933	Canola	cytosol, plastid	38.13	41.65
CDY24286	Canola	cytosol	38.36	41.58
GSMUA_Achr4P22800_001	Banana	cytosol	41.1	41.47
VIT_06s0009g00210.t01	Wine grape	cytosol	41.78	41.12
CDY10618	Canola	cytosol	37.9	40.89
Solyc11g071840.1.1	Tomato	cytosol	41.32	40.4
AT3G22190.2	Thale cress	cytosol	38.81	40.28
KRH39086	Soybean	cytosol	39.27	39.63
CDY39505	Canola	cytosol	34.25	37.97
CDX92931	Canola	mitochondrion, nucleus	21.69	37.25
Bra001855.1-P	Field mustard	cytosol	28.77	36.73
Bra023846.1-P	Field mustard	cytosol	33.33	35.01
CDY58749	Canola	cytosol	36.3	34.87
CDY24282	Canola	mitochondrion	21.46	30.82
HORVU7Hr1G024060.1	Barley	plastid	10.96	27.27
HORVU7Hr1G023980.1	Barley	nucleus	18.95	25.38
HORVU3Hr1G066840.2	Barley	cytosol	23.97	24.65
HORVU3Hr1G019240.2	Barley	mitochondrion, peroxisome	26.71	23.64
HORVU1Hr1G013210.1	Barley	cytosol	22.83	20.66
HORVU3Hr1G087500.2	Barley	cytosol	23.52	20.64
HORVU1Hr1G079590.12	Barley	cytosol	21.92	20.51
HORVU7Hr1G075720.1	Barley	plasma membrane	22.15	17.77
HORVU3Hr1G117830.2	Barley	endoplasmic reticulum, extracellular	22.6	16.95
HORVU1Hr1G071700.1	Barley	nucleus	18.95	16.15
HORVU3Hr1G089690.1	Barley	cytosol	17.12	11.94

Protein Annotations

EnsemblPlants:HORVU5Hr1G092660.2	EnsemblPlantsGene:HORVU5Hr1G092660	Gene3D:1.20.5.190	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	InterPro:P-loop_NTPase	PANTHER:PTHR32295	PANTHER:PTHR32295:SF31	PFAM:PF00612
PFscan:PS50096	SEG:seg	SMART:SM00015	SUPFAM:SSF52540	UniParc:UPI000294D856	UniProt:M0US85
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chrchr5H:-:588986029..588990806

Molecular Weight (calculated)

48200.6 Da

IEP (calculated)

10.266

GRAVY (calculated)

-0.844

Length

438 amino acids

Sequence
(BLAST)

001: MGISAKWIKS LVRIRKQEKG RGSENQEKAE NAESSEASSS ARQLHKRKHS LDLAVEELAV PNETSTDGTN TQLGSNSVSS ESASRDAHVS LTEELLTEGD
101: LAATVIQSAF RAFLARRALR ALKGIVLLQA LVRGHIVRKQ TAETLQCMHE LVRAEARVRA RQAGVALENQ VARKKVPEQD DCENHVREIE EGWCGGIGSV
201: AEMQAKVLKR QEAAAKRERA MAYALTHQRQ AGLRQQKPTN LQGSELDDDH WGSNWVERWV AARPWENRLL DNNAKESMPM CDDNQDEEIK PQVTPKGKAP
301: TSSTVTPPNG LNKKKGANHR KSYSDVNFTS FGRSSSVLPS TSLGTSKQKQ KSDDEAFEEV SSQPIDIASL AVLNQKERRG QLNTSAKKRL SLPNNVGGGA
401: SKETTNRNPT KRSISAKSDP KPRANAPNQA RKQVELQA

Best Arabidopsis Sequence Match ( AT2G26180.1 )
(BLAST)

001: MGASGKWVKS IIGLKKLEKD EIEKGNGKNK KWKLWRTTSV DSWKGFRGKH RSDSDGVDSS TVYSAAVATV LRAPPKDFKA VREEWAAIRI QTAFRGFLAR
101: RALRALKGIV RLQALVRGRQ VRKQAAVTLR CMQALVRVQA RVRARRVRMT VEGQAVQKLL DEHRTKSDLL KEVEEGWCDR KGTVDDIKSK LQQRQEGAFK
201: RERALAYALA QKQWRSTTSS NLKTNSSISY LKSQEFDKNS WGWSWLERWM AARPWETRLM DTVDTAATPP PLPHKHLKSP ETADVVQVRR NNVTTRVSAK
301: PPPHMLSSSP GYEFNESSGS SSICTSTTPV SGKTGLVSDN SSSQAKKHKP SYMSLTESTK AKRRTNRGLR QSMDEFQFMK NSGMFTGELK TSPSSDPFVS
401: FSKPLGVPTR FEKPRG

Arabidopsis Description

IQD6At2g26180 [Source:UniProtKB/TrEMBL;Acc:O64852]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.