Factsheet for HORVU5Hr1G007780.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
Predotar:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G037300.2	Wheat	nucleus	92.54	92.33
TraesCS5A01G029600.3	Wheat	nucleus	91.84	90.78
TraesCS5B01G028200.1	Wheat	nucleus	93.24	90.29
Os12t0619000-01	Rice	cytosol	72.03	69.91
KXG24027	Sorghum	cytosol	65.97	64.32
Zm00001d031098_P004	Maize	cytosol	65.03	55.25
HORVU5Hr1G092660.2	Barley	nucleus	55.94	54.79
GSMUA_Achr4P31410_001	Banana	cytosol	47.55	46.36
CDY37387	Canola	cytosol	41.49	46.35
Bra031331.1-P	Field mustard	cytosol	41.49	46.35
CDX92933	Canola	cytosol, plastid	42.89	45.89
CDY24286	Canola	cytosol	43.12	45.79
GSMUA_Achr5P02600_001	Banana	cytosol	45.92	44.87
GSMUA_Achr4P22800_001	Banana	cytosol	45.22	44.7
CDY10618	Canola	cytosol	41.96	44.34
VIT_06s0009g00210.t01	Wine grape	cytosol	45.92	44.27
AT3G22190.2	Thale cress	cytosol	43.36	44.08
KRH22612	Soybean	cytosol	43.12	43.53
KRH26707	Soybean	cytosol	42.66	43.36
Solyc11g071840.1.1	Tomato	cytosol	44.06	42.19
Bra001855.1-P	Field mustard	cytosol	33.1	41.4
KRH39086	Soybean	cytosol	41.72	41.24
CDY39505	Canola	cytosol	37.53	40.76
CDX92931	Canola	mitochondrion, nucleus	23.54	39.61
CDY58749	Canola	cytosol	40.33	37.94
Bra023846.1-P	Field mustard	cytosol	36.83	37.89
CDY24282	Canola	mitochondrion	23.54	33.11
HORVU7Hr1G024060.1	Barley	plastid	11.89	28.98
HORVU3Hr1G066840.2	Barley	cytosol	26.81	27.0
HORVU7Hr1G023980.1	Barley	nucleus	20.05	26.3
HORVU3Hr1G019240.2	Barley	mitochondrion, peroxisome	29.14	25.25
HORVU1Hr1G079590.12	Barley	cytosol	24.24	22.22
HORVU1Hr1G013210.1	Barley	cytosol	24.24	21.49
HORVU3Hr1G087500.2	Barley	cytosol	24.94	21.44
HORVU7Hr1G075720.1	Barley	plasma membrane	24.01	18.86
HORVU3Hr1G117830.2	Barley	endoplasmic reticulum, extracellular	24.94	18.32
HORVU1Hr1G071700.1	Barley	nucleus	21.21	17.7
HORVU3Hr1G089690.1	Barley	cytosol	19.81	13.54

Protein Annotations

EnsemblPlants:HORVU5Hr1G007780.1	EnsemblPlantsGene:HORVU5Hr1G007780	Gene3D:1.20.5.190	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR32295	PANTHER:PTHR32295:SF23	PFAM:PF00612	PFscan:PS50096
SEG:seg	SMART:SM00015	UniParc:UPI000B46C1AC	UniProt:A0A287QA24	MapMan:35.2	:

Description

No Description!

Coordinates

chrchr5H:+:16322753..16333881

Molecular Weight (calculated)

46157.0 Da

IEP (calculated)

10.925

GRAVY (calculated)

-0.908

Length

429 amino acids

Sequence
(BLAST)

001: MGISSKWIKS LVGIKKHGKA QNGESSRERS SAAQVLHKRK HSVDTEGALA VAEHTVQTEP LASDTNTQTV SSQTELNTKE HQAATVIQSA FRAFLARRAL
101: RALKGLVRLQ ALVRGHAVRK QAAETLQCMQ SLVKAQARVR ARQVRIGLEG QVTQKKAPEQ NAHDDHAREI EERWCGSIGS AEDMQAKVLK KQEAAAKRER
201: AMAYALTHQR QAGSRKLKAA DVQGPEADEN QWGRNWVERW VAVRPWENRL LDSNAKESVP IGDDKEAEEN GDRDVNNPKG KVAVSGIQSN GSSQTKDAKH
301: KKSHSDASGS SSGQSAAAPP TASLGSSKLK PKPSDQTSEE VSPQPTDPAP RSTSNPKERP AQVSAPTKKR LSLPNNAAVG GAARKGQVSS SERTRSVGSK
401: NTVKGASKPE SKQRPSPGSA TAKRVQAQA

Best Arabidopsis Sequence Match ( AT3G22190.1 )
(BLAST)

001: MGASGRWIKA LVGFTKSDKS RSSKKDENVK VATKSRFGRK NSVDFDFEKF QDGFEDSNTR SMVDTGVSTS TSLQSYGGVA YDEQSRENRA ATRIQTAYRG
101: FLARRALRAL KGLVRLQALV RGHAVRKQAA VTLRCMQALV RVQARVRARR VRLALELESE TSQQTLQQQL ADEARVREIE EGWCDSIGSV EQIQAKLLKR
201: QEAAAKRERA MAYALTHQWQ AGTRLLSAHS GFQPDKNNWG WNWLERWMAV RPWENRFLDS NLRDDAKLGE NGMEQSENVP KTQIKSVSKM PNTSNLVSGV
301: SSQMTGPCQS DGDSSSPGIS SSIPVVSKAK SKPAKDDLAV EVNSRPGAGP RSHSNPKERS REPNRSSKER LSLPNSGKSL GSQSTKANRA GKLTPASQKV
401: VEEKSAQNQR RRNSDPIKQR LA

Arabidopsis Description

IQD5IQD5 [Source:UniProtKB/TrEMBL;Acc:A0A178VHN2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.