Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 1
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra031331.1-P | Field mustard | cytosol | 97.14 | 97.14 |
| CDY10618 | Canola | cytosol | 96.35 | 91.13 |
| CDY24286 | Canola | cytosol | 82.29 | 78.22 |
| CDX92933 | Canola | cytosol, plastid | 80.99 | 77.56 |
| AT3G22190.2 | Thale cress | cytosol | 84.9 | 77.25 |
| CDX92931 | Canola | mitochondrion, nucleus | 47.14 | 70.98 |
| CDY39505 | Canola | cytosol | 71.35 | 69.37 |
| CDY58749 | Canola | cytosol | 78.39 | 66.01 |
| VIT_06s0009g00210.t01 | Wine grape | cytosol | 62.76 | 54.16 |
| KRH26707 | Soybean | cytosol | 58.85 | 53.55 |
| CDY24282 | Canola | mitochondrion | 42.19 | 53.11 |
| KRH22612 | Soybean | cytosol | 57.55 | 52.0 |
| Solyc11g071840.1.1 | Tomato | cytosol | 59.64 | 51.12 |
| KRH39086 | Soybean | cytosol | 57.55 | 50.92 |
| GSMUA_Achr4P31410_001 | Banana | cytosol | 54.95 | 47.95 |
| Os03t0787200-01 | Rice | cytosol | 51.56 | 46.92 |
| GSMUA_Achr5P02600_001 | Banana | cytosol | 51.82 | 45.33 |
| GSMUA_Achr4P22800_001 | Banana | cytosol | 51.04 | 45.16 |
| EER90769 | Sorghum | mitochondrion | 50.26 | 43.86 |
| Zm00001d034366_P003 | Maize | mitochondrion | 51.04 | 43.85 |
| TraesCS5B01G427800.1 | Wheat | cytosol, mitochondrion | 47.92 | 42.79 |
| KXG24027 | Sorghum | cytosol | 48.7 | 42.5 |
| TraesCS5A01G425800.1 | Wheat | cytosol, mitochondrion | 47.14 | 42.09 |
| TraesCSU01G076200.1 | Wheat | cytosol, mitochondrion | 47.14 | 42.09 |
| TraesCS5D01G037300.2 | Wheat | nucleus | 46.88 | 41.86 |
| HORVU5Hr1G007780.1 | Barley | cytosol | 46.35 | 41.49 |
| Os12t0619000-01 | Rice | cytosol | 47.4 | 41.18 |
| TraesCS5A01G029600.3 | Wheat | nucleus | 46.09 | 40.78 |
| Os03t0648300-01 | Rice | cytosol | 46.09 | 40.23 |
| TraesCS5B01G028200.1 | Wheat | nucleus | 45.83 | 39.73 |
| EER91163 | Sorghum | cytosol | 43.23 | 39.34 |
| TraesCS5B01G375000.1 | Wheat | nucleus | 44.01 | 38.76 |
| TraesCS5A01G373000.1 | Wheat | nucleus | 43.75 | 38.53 |
| CDX96427 | Canola | cytosol | 24.22 | 38.27 |
| Zm00001d033211_P002 | Maize | cytosol | 42.71 | 38.23 |
| TraesCS5D01G382500.1 | Wheat | nucleus | 43.49 | 38.13 |
| Zm00001d031098_P004 | Maize | cytosol | 50.0 | 38.02 |
| HORVU5Hr1G092660.2 | Barley | nucleus | 42.71 | 37.44 |
| Zm00001d013112_P011 | Maize | mitochondrion | 48.44 | 36.9 |
| CDX72935 | Canola | cytosol | 24.74 | 36.12 |
| CDY27925 | Canola | plastid | 23.96 | 34.72 |
| CDY17214 | Canola | cytosol, plastid | 23.96 | 34.72 |
| CDY32322 | Canola | cytosol, plastid | 22.14 | 32.82 |
| CDY35313 | Canola | nucleus | 33.85 | 32.75 |
| CDX77034 | Canola | cytosol | 33.59 | 32.58 |
| CDY20099 | Canola | cytosol | 22.14 | 32.2 |
| CDY62768 | Canola | cytosol | 22.14 | 30.69 |
| CDY26241 | Canola | nucleus | 27.08 | 27.73 |
| CDY48305 | Canola | nucleus | 27.08 | 27.73 |
| CDY11238 | Canola | cytosol, plastid | 28.39 | 26.39 |
| CDX80849 | Canola | cytosol, plastid | 28.91 | 26.06 |
| CDY55696 | Canola | nucleus, plastid | 28.91 | 25.4 |
| CDX95328 | Canola | cytosol | 29.43 | 25.39 |
| CDY23202 | Canola | cytosol | 29.43 | 25.39 |
| CDY04876 | Canola | nucleus, plastid | 29.43 | 25.39 |
| CDY10410 | Canola | cytosol, plastid | 28.39 | 24.55 |
| CDY05111 | Canola | nucleus | 25.78 | 23.08 |
| CDX90766 | Canola | nucleus | 25.78 | 22.97 |
| CDX70333 | Canola | cytosol | 28.65 | 22.92 |
| CDY15200 | Canola | nucleus | 28.65 | 21.53 |
| CDX90011 | Canola | nucleus | 28.39 | 21.46 |
| CDY08120 | Canola | mitochondrion, nucleus | 26.04 | 21.1 |
| CDY05917 | Canola | mitochondrion, nucleus | 26.04 | 21.05 |
| CDY08131 | Canola | nucleus | 18.75 | 20.93 |
| CDY38525 | Canola | cytosol | 22.4 | 20.82 |
| CDY05931 | Canola | nucleus | 18.75 | 20.45 |
| CDY00196 | Canola | nucleus | 24.74 | 20.0 |
| CDX86983 | Canola | nucleus | 24.74 | 20.0 |
| CDY69140 | Canola | mitochondrion, nucleus | 26.04 | 19.05 |
| CDX91859 | Canola | mitochondrion, nucleus | 26.04 | 18.87 |
| CDY07937 | Canola | nucleus | 22.4 | 17.99 |
| CDX73992 | Canola | nucleus | 22.14 | 17.82 |
| CDY05984 | Canola | nucleus | 22.66 | 17.58 |
| CDY30433 | Canola | cytosol | 20.57 | 17.56 |
| CDX71881 | Canola | nucleus | 22.14 | 17.21 |
| CDY05918 | Canola | mitochondrion | 14.06 | 17.2 |
| CDX83237 | Canola | cytosol | 22.4 | 16.96 |
| CDY41307 | Canola | cytosol | 23.7 | 16.64 |
| CDY23391 | Canola | cytosol | 19.79 | 16.49 |
| CDY22198 | Canola | cytosol | 23.96 | 16.46 |
| CDX83468 | Canola | plasma membrane | 19.53 | 13.61 |
| CDX79809 | Canola | nucleus | 21.09 | 13.55 |
| CDY66694 | Canola | nucleus | 20.57 | 13.19 |
| CDY44247 | Canola | nucleus | 19.01 | 13.13 |
| CDX72934 | Canola | nucleus, plastid | 2.6 | 9.8 |
| CDX96426 | Canola | nucleus, plastid | 2.6 | 9.8 |
Protein Annotations
| EnsemblPlants:CDY37387 | EnsemblPlantsGene:GSBRNA2T00063951001 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR000048 |
| InterPro:IQ_motif_EF-hand-BS | PANTHER:PTHR32295 | PANTHER:PTHR32295:SF12 | PFAM:PF00612 | PFscan:PS50096 | ProteinID:CDY37387 |
| ProteinID:CDY37387.1 | SEG:seg | SMART:SM00015 | UniParc:UPI0004EF22F5 | UniProt:A0A078HHP4 | MapMan:35.2 |
Description
BnaC05g30430DBnaC05g30430D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HHP4]
Coordinates
chrLK032399:-:112412..114494
Molecular Weight (calculated)
42541.3 Da
IEP (calculated)
10.984
GRAVY (calculated)
-0.708
Length
384 amino acids
Sequence
(BLAST)
(BLAST)
001: MGASGRWIKA LVGFTKSDKS KSKKKDDNVK TATKSRSGRN HSVDFDAEKF QLGFEDSNTH SSMLDNGVST STSYGAANEE QRKEHMAATR IQTAFRGFLA
101: RRALRALKGL VRLQALVRGH AVRKQAAVTL RCMQALVRVQ ARVRARRVRL ALESETGPQI LQQQLADEAR VREIEEGWCY SIGSVEQIQA KILKRQEAAA
201: KRERAMAYAL THQWQAGTRQ LSAHSGFQPD KNNWGWNWLE RWMAVRPWEN RFLDSNLRDD AILAENNMEQ SENVVHKTQM KIASKIPNTS NLASGVSSQK
301: VTGPSLSDGN SSSPGISSSM PVPVVSKDRS KLAKDDLAVE VVNSRPGAGP RSHSNPKERS RAPDKASKER LSLPNSGPIS FSNP
101: RRALRALKGL VRLQALVRGH AVRKQAAVTL RCMQALVRVQ ARVRARRVRL ALESETGPQI LQQQLADEAR VREIEEGWCY SIGSVEQIQA KILKRQEAAA
201: KRERAMAYAL THQWQAGTRQ LSAHSGFQPD KNNWGWNWLE RWMAVRPWEN RFLDSNLRDD AILAENNMEQ SENVVHKTQM KIASKIPNTS NLASGVSSQK
301: VTGPSLSDGN SSSPGISSSM PVPVVSKDRS KLAKDDLAVE VVNSRPGAGP RSHSNPKERS RAPDKASKER LSLPNSGPIS FSNP
001: MGASGRWIKA LVGFTKSDKS RSSKKDENVK VATKSRFGRK NSVDFDFEKF QDGFEDSNTR SMVDTGVSTS TSLQSYGGVA YDEQSRENRA ATRIQTAYRG
101: FLARRALRAL KGLVRLQALV RGHAVRKQAA VTLRCMQALV RVQARVRARR VRLALELESE TSQQTLQQQL ADEARVREIE EGWCDSIGSV EQIQAKLLKR
201: QEAAAKRERA MAYALTHQWQ AGTRLLSAHS GFQPDKNNWG WNWLERWMAV RPWENRFLDS NLRDDAKLGE NGMEQSENVP KTQIKSVSKM PNTSNLVSGV
301: SSQMTGPCQS DGDSSSPGIS SSIPVVSKAK SKPAKDDLAV EVNSRPGAGP RSHSNPKERS REPNRSSKER LSLPNSGKSL GSQSTKANRA GKLTPASQKV
401: VEEKSAQNQR RRNSDPIKQR LA
101: FLARRALRAL KGLVRLQALV RGHAVRKQAA VTLRCMQALV RVQARVRARR VRLALELESE TSQQTLQQQL ADEARVREIE EGWCDSIGSV EQIQAKLLKR
201: QEAAAKRERA MAYALTHQWQ AGTRLLSAHS GFQPDKNNWG WNWLERWMAV RPWENRFLDS NLRDDAKLGE NGMEQSENVP KTQIKSVSKM PNTSNLVSGV
301: SSQMTGPCQS DGDSSSPGIS SSIPVVSKAK SKPAKDDLAV EVNSRPGAGP RSHSNPKERS REPNRSSKER LSLPNSGKSL GSQSTKANRA GKLTPASQKV
401: VEEKSAQNQR RRNSDPIKQR LA
Arabidopsis Description
IQD5IQD5 [Source:UniProtKB/TrEMBL;Acc:A0A178VHN2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.