CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d033211_P002	Maize	cytosol	90.52	89.04
Os03t0648300-01	Rice	cytosol	72.27	69.32
TraesCS5B01G375000.1	Wheat	nucleus	69.19	66.97
TraesCS5A01G373000.1	Wheat	nucleus	69.19	66.97
HORVU5Hr1G092660.2	Barley	nucleus	68.72	66.21
TraesCS5D01G382500.1	Wheat	nucleus	68.01	65.53
KXG24027	Sorghum	cytosol	57.11	54.77
GSMUA_Achr4P31410_001	Banana	cytosol	45.73	43.86
Bra031331.1-P	Field mustard	cytosol	39.57	43.49
CDY37387	Canola	cytosol	39.34	43.23
KRH26707	Soybean	cytosol	41.94	41.94
GSMUA_Achr4P22800_001	Banana	cytosol	43.13	41.94
GSMUA_Achr5P02600_001	Banana	cytosol	43.6	41.91
CDY10618	Canola	cytosol	39.81	41.38
CDY24286	Canola	cytosol	39.1	40.84
KRH22612	Soybean	cytosol	41.0	40.71
CDX92933	Canola	cytosol, plastid	38.63	40.65
AT3G22190.2	Thale cress	cytosol	40.28	40.28
VIT_06s0009g00210.t01	Wine grape	cytosol	41.71	39.55
KRH39086	Soybean	cytosol	40.28	39.17
Solyc11g071840.1.1	Tomato	cytosol	40.28	37.95
EER90769	Sorghum	mitochondrion	39.34	37.73
CDY39505	Canola	cytosol	35.31	37.72
CDX92931	Canola	mitochondrion, nucleus	22.51	37.25
Bra001855.1-P	Field mustard	cytosol	28.91	35.57
CDY58749	Canola	cytosol	38.15	35.31
Bra023846.1-P	Field mustard	cytosol	34.83	35.25
CDY24282	Canola	mitochondrion	22.27	30.82
OQU86150	Sorghum	cytosol	27.01	25.68
EER87873	Sorghum	nucleus	20.14	25.53
EES03502	Sorghum	mitochondrion	25.36	24.49
KXG21175	Sorghum	cytosol	23.7	21.14
KXG33651	Sorghum	cytosol	24.17	20.48
KXG22437	Sorghum	mitochondrion, plastid	23.7	18.32
EES14418	Sorghum	cytosol	22.27	16.38
OQU78148	Sorghum	cytosol	19.19	14.46
EES01898	Sorghum	cytosol	18.72	14.03

Protein Annotations

EnsemblPlants:EER91163	EnsemblPlantsGene:SORBI_3001G154200	EntrezGene:8057234	Gene3D:1.20.5.190	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR32295	PANTHER:PTHR32295:SF31	PFAM:PF00612
PFscan:PS50096	ProteinID:EER91163	ProteinID:EER91163.1	ProteinID:KXG37934.1	RefSeq:XP_002464165.1	SEG:seg
SMART:SM00015	unigene:Sbi.20972	UniParc:UPI0001A820A2	UniProt:C5WR55	MapMan:35.2	:

Description

hypothetical protein

Coordinates

chr1:+:12379418..12386921

Molecular Weight (calculated)

46233.7 Da

IEP (calculated)

10.399

GRAVY (calculated)

-0.764

Length

422 amino acids

Sequence
(BLAST)

001: MGISSKWIKS LVGIRKQEKG QNAEKQEKGR NAESSETKHS LVPGGALAVE EIAVQSGALT DDKSTQMISN SICSDNTSLD VQISQAEHHS KEDLAATVVQ
101: SAFRAFLARR ALRALKGIVL LQALIRGHSV RRQTTETLQC MQALVKAQAR VRARQVRVAL ENQVARKKIP EQDDHENHVR EVEGGWCGSI GSMEEMQAKA
201: LKRREAAAKR ERAMAYALTH QRQAGSKQQI STSLQGLELG ENHWGSNWLD RWMAVRPWEN RLLDCNAKES LPTHEDKKDE EANSQITPKG KVSTSNTPGL
301: SKKKGVNHKK SYSDVSCTSF ARQANVLPST SLGSSKQKAK VTDEVFEEVS SQPTDIGSKA VRNPKDKLVQ VNAPAKKRLS LPNNVGREAG KGPTHRNSIN
401: RSGPKAQADA PNQGGEPVEL QA

Best Arabidopsis Sequence Match ( AT3G22190.1 )
(BLAST)

001: MGASGRWIKA LVGFTKSDKS RSSKKDENVK VATKSRFGRK NSVDFDFEKF QDGFEDSNTR SMVDTGVSTS TSLQSYGGVA YDEQSRENRA ATRIQTAYRG
101: FLARRALRAL KGLVRLQALV RGHAVRKQAA VTLRCMQALV RVQARVRARR VRLALELESE TSQQTLQQQL ADEARVREIE EGWCDSIGSV EQIQAKLLKR
201: QEAAAKRERA MAYALTHQWQ AGTRLLSAHS GFQPDKNNWG WNWLERWMAV RPWENRFLDS NLRDDAKLGE NGMEQSENVP KTQIKSVSKM PNTSNLVSGV
301: SSQMTGPCQS DGDSSSPGIS SSIPVVSKAK SKPAKDDLAV EVNSRPGAGP RSHSNPKERS REPNRSSKER LSLPNSGKSL GSQSTKANRA GKLTPASQKV
401: VEEKSAQNQR RRNSDPIKQR LA

Arabidopsis Description

IQD5IQD5 [Source:UniProtKB/TrEMBL;Acc:A0A178VHN2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.