Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G373000.1 | Wheat | nucleus | 72.05 | 72.71 |
| TraesCS5B01G375000.1 | Wheat | nucleus | 71.82 | 72.48 |
| EER91163 | Sorghum | cytosol | 69.32 | 72.27 |
| TraesCS5D01G382500.1 | Wheat | nucleus | 71.82 | 72.15 |
| HORVU5Hr1G092660.2 | Barley | nucleus | 71.82 | 72.15 |
| Zm00001d033211_P002 | Maize | cytosol | 68.64 | 70.4 |
| Os12t0619000-01 | Rice | cytosol | 61.59 | 61.31 |
| GSMUA_Achr4P31410_001 | Banana | cytosol | 46.59 | 46.59 |
| Bra031331.1-P | Field mustard | cytosol | 40.23 | 46.09 |
| CDY37387 | Canola | cytosol | 40.23 | 46.09 |
| CDY24286 | Canola | cytosol | 42.05 | 45.79 |
| CDX92933 | Canola | cytosol, plastid | 41.59 | 45.64 |
| KRH26707 | Soybean | cytosol | 42.27 | 44.08 |
| GSMUA_Achr4P22800_001 | Banana | cytosol | 43.41 | 44.01 |
| KRH22612 | Soybean | cytosol | 42.5 | 44.0 |
| CDY10618 | Canola | cytosol | 40.23 | 43.6 |
| VIT_06s0009g00210.t01 | Wine grape | cytosol | 43.64 | 43.15 |
| AT3G22190.2 | Thale cress | cytosol | 41.36 | 43.13 |
| GSMUA_Achr5P02600_001 | Banana | cytosol | 42.73 | 42.82 |
| Solyc11g071840.1.1 | Tomato | cytosol | 43.41 | 42.63 |
| KRH39086 | Soybean | cytosol | 41.59 | 42.17 |
| Os03t0787200-01 | Rice | cytosol | 39.77 | 41.47 |
| CDX92931 | Canola | mitochondrion, nucleus | 23.64 | 40.78 |
| Bra001855.1-P | Field mustard | cytosol | 31.36 | 40.23 |
| CDY39505 | Canola | cytosol | 35.91 | 40.0 |
| CDY58749 | Canola | cytosol | 39.55 | 38.16 |
| Bra023846.1-P | Field mustard | cytosol | 35.68 | 37.65 |
| CDY24282 | Canola | mitochondrion | 22.95 | 33.11 |
| Os05t0541100-01 | Rice | plastid | 25.23 | 27.21 |
| Os01t0194200-01 | Rice | cytosol | 26.14 | 26.02 |
| Os01t0708700-01 | Rice | cytosol | 25.45 | 25.4 |
| Os06t0155300-01 | Rice | plasma membrane | 19.55 | 24.36 |
| Os05t0123200-01 | Rice | plasma membrane | 24.09 | 22.36 |
| Os01t0833800-01 | Rice | plasma membrane | 22.05 | 19.4 |
| Os01t0896200-01 | Rice | mitochondrion | 12.73 | 16.62 |
| Os08t0115200-01 | Rice | cytosol | 20.45 | 16.57 |
| Os05t0463300-00 | Rice | plasma membrane | 17.95 | 15.74 |
Protein Annotations
| EMBL:AK067192 | EnsemblPlants:Os03t0648300-01 | EnsemblPlantsGene:Os03g0648300 | EntrezGene:4333579 | Gene3D:1.20.5.190 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR000048 | InterPro:IQ_motif_EF-hand-BS | ncoils:Coil | PANTHER:PTHR32295 |
| PANTHER:PTHR32295:SF31 | PFAM:PF00612 | PFscan:PS50096 | ProteinID:ABF97898.1 | ProteinID:BAS85491.1 | RefSeq:XP_015628407.1 |
| SEG:seg | SMART:SM00015 | UniParc:UPI0000DB4E6E | UniProt:Q10G08 | MapMan:35.2 | : |
Description
Similar to Calmodulin binding protein. (Os03t0648300-01)
Coordinates
chr3:-:25116242..25124259
Molecular Weight (calculated)
48672.6 Da
IEP (calculated)
10.264
GRAVY (calculated)
-0.752
Length
440 amino acids
Sequence
(BLAST)
(BLAST)
001: MGISSKWFKS LVGIRKQEKA RNAEKQEKAQ NAESCETSTP AAQLLHKRKH SLDTERAILV EELAVQSEPL TDDTNTQTVS DSISSDSTLL GVHISQTEEH
101: KTKEDVAATL IQSAFRAFLA RRALRALKGI VILQALVRGH IIRKQTSETL QCMQALVRAQ ARVRARQVRV SLENQVARKK VPEQDDHENH VREIEERWCG
201: SIGSVEELQA KVLKRQEAAA KRERAMAYAL THQRQAGSRQ QKPTTPQGLE LDDSHWGSNW LERWMAVRPW ENRLLDSNTK ETMPLCDDKQ DMETKSQITP
301: KGKVQVSSAL SNGSNKKKGI NHKKSYSDVT CASFGRSPNI PSTSLGSCKQ KSKLSDEALE EVSSQPTDLA SLSTCQPKAK LVQANTPVKK WLSLPTNVGG
401: GAAKGATNSN SICRSTSAKS DPKPRANASN QSRKQVELQA
101: KTKEDVAATL IQSAFRAFLA RRALRALKGI VILQALVRGH IIRKQTSETL QCMQALVRAQ ARVRARQVRV SLENQVARKK VPEQDDHENH VREIEERWCG
201: SIGSVEELQA KVLKRQEAAA KRERAMAYAL THQRQAGSRQ QKPTTPQGLE LDDSHWGSNW LERWMAVRPW ENRLLDSNTK ETMPLCDDKQ DMETKSQITP
301: KGKVQVSSAL SNGSNKKKGI NHKKSYSDVT CASFGRSPNI PSTSLGSCKQ KSKLSDEALE EVSSQPTDLA SLSTCQPKAK LVQANTPVKK WLSLPTNVGG
401: GAAKGATNSN SICRSTSAKS DPKPRANASN QSRKQVELQA
001: MGASGRWIKA LVGFTKSDKS RSSKKDENVK VATKSRFGRK NSVDFDFEKF QDGFEDSNTR SMVDTGVSTS TSLQSYGGVA YDEQSRENRA ATRIQTAYRG
101: FLARRALRAL KGLVRLQALV RGHAVRKQAA VTLRCMQALV RVQARVRARR VRLALELESE TSQQTLQQQL ADEARVREIE EGWCDSIGSV EQIQAKLLKR
201: QEAAAKRERA MAYALTHQWQ AGTRLLSAHS GFQPDKNNWG WNWLERWMAV RPWENRFLDS NLRDDAKLGE NGMEQSENVP KTQIKSVSKM PNTSNLVSGV
301: SSQMTGPCQS DGDSSSPGIS SSIPVVSKAK SKPAKDDLAV EVNSRPGAGP RSHSNPKERS REPNRSSKER LSLPNSGKSL GSQSTKANRA GKLTPASQKV
401: VEEKSAQNQR RRNSDPIKQR LA
101: FLARRALRAL KGLVRLQALV RGHAVRKQAA VTLRCMQALV RVQARVRARR VRLALELESE TSQQTLQQQL ADEARVREIE EGWCDSIGSV EQIQAKLLKR
201: QEAAAKRERA MAYALTHQWQ AGTRLLSAHS GFQPDKNNWG WNWLERWMAV RPWENRFLDS NLRDDAKLGE NGMEQSENVP KTQIKSVSKM PNTSNLVSGV
301: SSQMTGPCQS DGDSSSPGIS SSIPVVSKAK SKPAKDDLAV EVNSRPGAGP RSHSNPKERS REPNRSSKER LSLPNSGKSL GSQSTKANRA GKLTPASQKV
401: VEEKSAQNQR RRNSDPIKQR LA
Arabidopsis Description
IQD5IQD5 [Source:UniProtKB/TrEMBL;Acc:A0A178VHN2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.