Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plasma membrane:
27800704
|
msms PMID:
27800704
doi
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os02t0708400-01 | |
| Os11t0171500-01 | |
| Os12t0169800-00 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G03040.1 | Os02t0708400-01 | AT3G27960.1 | 21798944 |
| AT5G03040.1 | Os11t0171500-01 | AT4G09570.1 | 19130088 |
| AT5G03040.1 | Os12t0169800-00 | AT4G09570.1 | 19130088 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG21175 | Sorghum | cytosol | 85.23 | 85.41 |
| TraesCS1A01G064100.1 | Wheat | cytosol | 85.02 | 83.96 |
| TraesCS1D01G064700.1 | Wheat | cytosol | 84.6 | 83.89 |
| TraesCS1B01G082100.1 | Wheat | cytosol | 84.81 | 83.75 |
| HORVU1Hr1G013210.1 | Barley | cytosol | 85.23 | 83.47 |
| Zm00001d035492_P009 | Maize | cytosol | 82.91 | 82.56 |
| Zm00001d010975_P003 | Maize | cytosol | 81.01 | 80.33 |
| GSMUA_Achr3P17820_001 | Banana | cytosol | 64.77 | 64.23 |
| GSMUA_Achr10P... | Banana | nucleus | 59.49 | 62.67 |
| GSMUA_Achr7P18240_001 | Banana | cytosol | 56.75 | 56.99 |
| VIT_08s0040g02360.t01 | Wine grape | nucleus | 55.91 | 55.32 |
| KRG95941 | Soybean | nucleus | 53.59 | 53.25 |
| Solyc10g084280.1.1 | Tomato | nucleus | 53.59 | 53.14 |
| KRH67648 | Soybean | nucleus | 53.38 | 53.04 |
| PGSC0003DMT400027139 | Potato | cytosol | 53.38 | 52.6 |
| CDY11238 | Canola | cytosol, plastid | 45.57 | 52.3 |
| PGSC0003DMT400045333 | Potato | cytosol | 51.69 | 52.02 |
| KRH32420 | Soybean | cytosol | 51.9 | 51.9 |
| KRH19825 | Soybean | cytosol | 51.27 | 51.7 |
| Solyc10g086060.1.1 | Tomato | cytosol | 51.27 | 51.59 |
| CDX80849 | Canola | cytosol, plastid | 45.78 | 50.94 |
| PGSC0003DMT400004433 | Potato | cytosol | 51.05 | 50.42 |
| Solyc09g007410.2.1 | Tomato | cytosol | 50.84 | 49.9 |
| CDY10410 | Canola | cytosol, plastid | 45.15 | 48.2 |
| AT5G03040.1 | Thale cress | cytosol, plastid | 46.62 | 47.94 |
| CDY04876 | Canola | nucleus, plastid | 44.73 | 47.64 |
| Bra028854.1-P | Field mustard | nucleus, plastid | 44.51 | 47.42 |
| CDY55696 | Canola | nucleus, plastid | 43.67 | 47.37 |
| Os01t0833800-01 | Rice | plasma membrane | 49.16 | 46.6 |
| CDX70333 | Canola | cytosol | 44.09 | 43.54 |
| Bra009554.1-P | Field mustard | cytosol | 43.25 | 43.52 |
| AT3G09710.2 | Thale cress | nucleus | 42.41 | 42.95 |
| Bra034081.1-P | Field mustard | nucleus | 38.4 | 40.99 |
| Bra001299.1-P | Field mustard | nucleus | 35.23 | 35.31 |
| CDX73992 | Canola | nucleus | 35.44 | 35.22 |
| CDY41307 | Canola | cytosol | 39.03 | 33.82 |
| CDY22198 | Canola | cytosol | 39.66 | 33.63 |
| CDY07937 | Canola | nucleus | 33.76 | 33.47 |
| Os05t0463300-00 | Rice | plasma membrane | 33.33 | 31.47 |
| Os01t0194200-01 | Rice | cytosol | 26.16 | 28.05 |
| Os12t0619000-01 | Rice | cytosol | 25.74 | 27.6 |
| Os01t0896200-01 | Rice | mitochondrion | 19.41 | 27.3 |
| Os03t0787200-01 | Rice | cytosol | 23.84 | 26.78 |
| Os05t0541100-01 | Rice | plastid | 23.0 | 26.72 |
| Os01t0708700-01 | Rice | cytosol | 24.26 | 26.08 |
| Os08t0115200-01 | Rice | cytosol | 28.69 | 25.05 |
| Os06t0155300-01 | Rice | plasma membrane | 18.35 | 24.65 |
| Os03t0648300-01 | Rice | cytosol | 22.36 | 24.09 |
Protein Annotations
| MapMan:35.1 | EntrezGene:4337666 | ProteinID:AAS72364.2 | ProteinID:AAV33309.1 | EMBL:AK105073 | ProteinID:BAS92048.1 |
| InterPro:DUF4005 | ProteinID:EEE62162.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR000048 |
| InterPro:IQ_motif_EF-hand-BS | EnsemblPlantsGene:Os05g0123200 | EnsemblPlants:Os05t0123200-01 | PFAM:PF00612 | PFAM:PF13178 | PFscan:PS50096 |
| PANTHER:PTHR32295 | PANTHER:PTHR32295:SF89 | UniProt:Q75L83 | SMART:SM00015 | UniParc:UPI00004519A8 | RefSeq:XP_015639727.1 |
| SEG:seg | : | : | : | : | : |
Description
Similar to IQD1. (Os05t0123200-01);IQ calmodulin-binding region domain containing protein. (Os05t0123200-02);Similar to IQD1. (Os05t0123200-03)
Coordinates
chr5:+:1291479..1295477
Molecular Weight (calculated)
52037.9 Da
IEP (calculated)
10.908
GRAVY (calculated)
-0.747
Length
474 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKKGKWFGA VKKVFSPESK EKKEERLRRK LAASNPNPPD LTPSASLEVN VSVPPPPPPP PVQQIEEVKV PEVEQEQSKH VTVEAVPEAV PVPAQTSSLP
101: PGVSREEQAT IKIQTAFRGY LARRALRALR GLVRLKSLVE GNSVKRQAAS TLRCMQTLAR VQSQIRSRRL KMSEENQALQ RQLLLKQELE SLRMGEQWDD
201: STQSKEQIEA SLISRQEAAV RRERALAYAF SHQWKSTSRS VNPMFVDPNN PQWGWSWLER WMAAKPWEGR AGTDKESNLD RASAKSASLN LGEGEITKAF
301: NRRGSKPDKS SPTTPKLTRP ASRQSPSTPS AKVSPIFAKK KSATPKNGLS QVDDDAKSVF SVQSERPRRH SIATSTVRDD ESLASSPSVP SYMAPTKSAR
401: AKLRLQGSAV TDGAETPPEK VASVGSVKKK LSFQAGMAPP SPMRRHSGPP KVEVVKDIAE PPQPEALVIN GGSK
101: PGVSREEQAT IKIQTAFRGY LARRALRALR GLVRLKSLVE GNSVKRQAAS TLRCMQTLAR VQSQIRSRRL KMSEENQALQ RQLLLKQELE SLRMGEQWDD
201: STQSKEQIEA SLISRQEAAV RRERALAYAF SHQWKSTSRS VNPMFVDPNN PQWGWSWLER WMAAKPWEGR AGTDKESNLD RASAKSASLN LGEGEITKAF
301: NRRGSKPDKS SPTTPKLTRP ASRQSPSTPS AKVSPIFAKK KSATPKNGLS QVDDDAKSVF SVQSERPRRH SIATSTVRDD ESLASSPSVP SYMAPTKSAR
401: AKLRLQGSAV TDGAETPPEK VASVGSVKKK LSFQAGMAPP SPMRRHSGPP KVEVVKDIAE PPQPEALVIN GGSK
001: MGKKAKWFSS VKKAFSPDSK KSKQKLAEGQ NGVISNPPVV DNVRQSSSSP PPALAPREVR VAEVIVERNR DLSPPSTADA VNVTATDVPV VPSSSAPGVV
101: RRATPTRFAG KSNEEAAAIL IQTIFRGYLA RRALRAMRGL VRLKLLMEGS VVKRQAANTL KCMQTLSRVQ SQIRARRIRM SEENQARQKQ LLQKHAKELA
201: GLKNGDNWND SIQSKEKVEA NLLSKYEATM RRERALAYSY SHQQNWKNNS KSGNPMFMDP SNPTWGWSWL ERWMAGRPLE SSEKEQSNSN NDNAASVKGS
301: INRNEAAKSL TRNGSTQPNT PSSARGTPRN KNSFFSPPTP SRLNQSSRKS NDDDSKSTIS VLSERNRRHS IAGSSVRDDE SLAGSPALPS YMVPTKSARA
401: RLKPQSPLGG TTQENEGFTD KASAKKRLSY PTSPALPKPR RFSAPPKVES GGVTVTNGAG S
101: RRATPTRFAG KSNEEAAAIL IQTIFRGYLA RRALRAMRGL VRLKLLMEGS VVKRQAANTL KCMQTLSRVQ SQIRARRIRM SEENQARQKQ LLQKHAKELA
201: GLKNGDNWND SIQSKEKVEA NLLSKYEATM RRERALAYSY SHQQNWKNNS KSGNPMFMDP SNPTWGWSWL ERWMAGRPLE SSEKEQSNSN NDNAASVKGS
301: INRNEAAKSL TRNGSTQPNT PSSARGTPRN KNSFFSPPTP SRLNQSSRKS NDDDSKSTIS VLSERNRRHS IAGSSVRDDE SLAGSPALPS YMVPTKSARA
401: RLKPQSPLGG TTQENEGFTD KASAKKRLSY PTSPALPKPR RFSAPPKVES GGVTVTNGAG S
Arabidopsis Description
iqd2At5g03040/F15A17_70 [Source:UniProtKB/TrEMBL;Acc:Q93ZH7]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.