Factsheet for AT3G09710.2

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra034081.1-P	Field mustard	nucleus	67.31	70.95
Bra001299.1-P	Field mustard	nucleus	63.68	63.0
CDX73992	Canola	nucleus	63.89	62.68
CDY07937	Canola	nucleus	63.68	62.34
AT5G03040.1	Thale cress	cytosol, plastid	58.97	59.87
CDY22198	Canola	cytosol	69.23	57.96
CDY41307	Canola	cytosol	67.09	57.4
KRG95941	Soybean	nucleus	46.58	45.7
KRH67648	Soybean	nucleus	45.73	44.86
VIT_08s0040g02360.t01	Wine grape	nucleus	45.51	44.47
GSMUA_Achr10P...	Banana	nucleus	42.09	43.78
Solyc10g086060.1.1	Tomato	cytosol	44.02	43.74
PGSC0003DMT400045333	Potato	cytosol	43.8	43.52
GSMUA_Achr3P17820_001	Banana	cytosol	44.02	43.1
KRH19825	Soybean	cytosol	43.16	42.98
KXG21175	Sorghum	cytosol	42.95	42.49
Zm00001d035492_P009	Maize	cytosol	43.16	42.44
Os05t0123200-01	Rice	plasma membrane	42.95	42.41
KRH32420	Soybean	cytosol	42.95	42.41
PGSC0003DMT400004433	Potato	cytosol	42.52	41.46
TraesCS1A01G064100.1	Wheat	cytosol	42.31	41.25
TraesCS1D01G064700.1	Wheat	cytosol	42.09	41.21
Solyc10g084280.1.1	Tomato	nucleus	42.09	41.21
PGSC0003DMT400027139	Potato	cytosol	42.31	41.16
Zm00001d010975_P003	Maize	cytosol	41.88	41.0
Solyc09g007410.2.1	Tomato	cytosol	42.31	40.99
HORVU1Hr1G013210.1	Barley	cytosol	42.31	40.91
TraesCS1B01G082100.1	Wheat	cytosol	41.88	40.83
GSMUA_Achr7P18240_001	Banana	cytosol	39.96	39.62
AT3G52290.1	Thale cress	cytosol	34.83	37.91
GSMUA_AchrUn_...	Banana	mitochondrion, nucleus	36.75	37.47
TraesCS3D01G543500.1	Wheat	cytosol	39.1	36.9
GSMUA_Achr7P22680_001	Banana	cytosol	35.9	36.13
GSMUA_Achr10P...	Banana	cytosol	31.84	35.31
TraesCS3B01G603500.1	Wheat	cytosol, mitochondrion	38.89	34.6
TraesCS3B01G385100.1	Wheat	cytosol	36.75	34.47
TraesCS3D01G346500.1	Wheat	cytosol	36.54	34.27
HORVU3Hr1G087500.2	Barley	cytosol	36.54	34.27
TraesCS3A01G352500.1	Wheat	cytosol	36.54	34.27
Os01t0833800-01	Rice	plasma membrane	36.54	34.2
TraesCS3A01G538100.1	Wheat	cytosol, mitochondrion	38.68	34.09
KXG33651	Sorghum	cytosol	35.68	33.53
Zm00001d042973_P007	Maize	cytosol	35.47	32.74
GSMUA_Achr11P...	Banana	mitochondrion	32.27	32.68
HORVU3Hr1G117830.2	Barley	endoplasmic reticulum, extracellular	39.32	31.51
AT2G33990.1	Thale cress	cytosol	17.31	30.8
AT3G15050.1	Thale cress	plastid	14.32	25.87
AT2G26410.2	Thale cress	cytosol	28.21	25.05
Os05t0463300-00	Rice	plasma membrane	26.71	24.9
OQU78148	Sorghum	cytosol	29.27	24.46
AT2G26180.1	Thale cress	cytosol	21.58	24.28
HORVU1Hr1G071700.1	Barley	nucleus	26.5	24.12
AT3G22190.2	Thale cress	cytosol	21.37	23.7
TraesCS1D01G287100.2	Wheat	cytosol	26.5	23.44
TraesCS1A01G288100.2	Wheat	nucleus	25.85	23.22
TraesCS1B01G297500.1	Wheat	cytosol	25.64	22.73
AT4G10640.1	Thale cress	nucleus	18.8	20.8
Zm00001d038395_P005	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	28.21	20.31
AT1G72670.1	Thale cress	cytosol	17.31	19.57
AT3G59690.2	Thale cress	nucleus	21.15	19.15
AT1G17480.1	Thale cress	cytosol	15.17	19.14
AT3G49260.3	Thale cress	nucleus	19.23	19.07
AT3G49380.1	Thale cress	nucleus	14.32	19.03
AT4G00820.1	Thale cress	mitochondrion, nucleus	21.37	18.73
AT1G01110.2	Thale cress	nucleus	20.51	18.22
AT2G43680.1	Thale cress	nucleus	21.79	15.25

Protein Annotations

MapMan:35.1	EntrezGene:820128	ProteinID:AEE74802.1	ArrayExpress:AT3G09710	EnsemblPlantsGene:AT3G09710	RefSeq:AT3G09710
TAIR:AT3G09710	RefSeq:AT3G09710-TAIR-G	EnsemblPlants:AT3G09710.2	TAIR:AT3G09710.2	Unigene:At.50163	UniProt:F4J1A4
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005516	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006950	GO:GO:0006952	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0019748	GO:GO:0019761	InterPro:IPR000048	Symbol:IQD1
InterPro:IQ_motif_EF-hand-BS	RefSeq:NP_001189848.1	PFAM:PF00612	PO:PO:0000037	PO:PO:0000230	PO:PO:0000293
PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007611	PO:PO:0007616
PO:PO:0009005	PO:PO:0009009	PO:PO:0009010	PO:PO:0009015	PO:PO:0009030	PO:PO:0009031
PO:PO:0009032	PO:PO:0009046	PO:PO:0009052	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022
PO:PO:0025281	PFscan:PS50096	PANTHER:PTHR32295	PANTHER:PTHR32295:SF28	SMART:SM00015	UniParc:UPI0001E92E4D
SEG:seg	:	:	:	:	:

Description

IQD1IQ-domain 1 [Source:UniProtKB/TrEMBL;Acc:F4J1A4]

Coordinates

chr3:-:2976585..2979389

Molecular Weight (calculated)

52226.7 Da

IEP (calculated)

11.092

GRAVY (calculated)

-0.909

Length

468 amino acids

Sequence
(BLAST)

001: MVKKAKWLKN VKKAFSPDSK KLKHESVECQ DSVISYPVLI ATSRSSSPQF EVRVDEVNYE QKKNLYPPSS DSVTATVAHV LVDSPPSSPE SVHQAIVVNR
101: FAGKSKEEAA AILIQSTFRG HLARRESQVM RGQERLKLLM EGSVVQRQAA ITLKCMQTLS RVQSQIRSRR IRMSEENQAR HKQLLQKHAK ELGGLKLFMR
201: LFKFIVVSSD NGGNWNYSNQ SKEQVEAGML HKYEATMRRE RALAYAFTHQ QNLKSFSKTA NPMFMDPSNP TWGWSWLERW MAGRPWESSE KEQNTTNNDN
301: SSVKNSTNRN SQGGETAKSS NRNKLNSSTK PNTPSASSTA TRNPRKKRPI PSSIKSKSSD DEAKSSERNR RPSIARPSVS DDETLSSSTA RRSSNLIPTT
401: KSARGKPKSQ TSSRVAVTTS TTEESSILPE KAPAKKRLST SASPAPKPRR SSAPPKVEKG VLKAERTP

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.