Factsheet for HORVU3Hr1G117830.2

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:

extracellular 3
endoplasmic reticulum 3
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
TargetP:	secretory
YLoc:	endoplasmic reticulum

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU4Hr1G019530.1
HORVU5Hr1G032550.3
HORVU6Hr1G069310.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G03040.1	HORVU6Hr1G069310.1	AT3G27960.1	21798944
AT5G03040.1	HORVU4Hr1G019530.1	AT4G09570.1	19130088
AT5G03040.1	HORVU5Hr1G032550.3	AT4G09570.1	19130088

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G543500.1	Wheat	cytosol	73.12	86.09
TraesCS3B01G603500.1	Wheat	cytosol, mitochondrion	77.4	85.93
TraesCS3A01G538100.1	Wheat	cytosol, mitochondrion	76.2	83.8
HORVU1Hr1G013210.1	Barley	cytosol	48.46	58.47
GSMUA_Achr10P...	Banana	nucleus	41.61	54.0
GSMUA_Achr3P17820_001	Banana	cytosol	43.49	53.14
VIT_08s0040g02360.t01	Wine grape	nucleus	40.75	49.69
KRG95941	Soybean	nucleus	40.24	49.27
KRH67648	Soybean	nucleus	39.73	48.64
CDY11238	Canola	cytosol, plastid	34.08	48.18
Solyc10g086060.1.1	Tomato	cytosol	38.53	47.77
PGSC0003DMT400045333	Potato	cytosol	38.01	47.13
CDX80849	Canola	cytosol, plastid	34.25	46.95
PGSC0003DMT400027139	Potato	cytosol	38.53	46.78
PGSC0003DMT400004433	Potato	cytosol	38.36	46.67
GSMUA_Achr7P18240_001	Banana	cytosol	37.67	46.61
Solyc09g007410.2.1	Tomato	cytosol	38.53	46.58
Solyc10g084280.1.1	Tomato	nucleus	38.01	46.44
KRH32420	Soybean	cytosol	36.82	45.36
KRH19825	Soybean	cytosol	36.47	45.32
CDY55696	Canola	nucleus, plastid	33.39	44.62
CDY10410	Canola	cytosol, plastid	33.73	44.37
CDY04876	Canola	nucleus, plastid	33.73	44.27
AT5G03040.1	Thale cress	cytosol, plastid	34.93	44.25
Bra028854.1-P	Field mustard	nucleus, plastid	33.56	44.04
HORVU3Hr1G087500.2	Barley	cytosol	36.64	42.89
CDX70333	Canola	cytosol	33.9	41.25
Bra009554.1-P	Field mustard	cytosol	32.88	40.76
AT3G09710.2	Thale cress	nucleus	31.51	39.32
Bra034081.1-P	Field mustard	nucleus	27.91	36.71
CDX73992	Canola	nucleus	26.37	32.29
Bra001299.1-P	Field mustard	nucleus	25.68	31.71
CDY07937	Canola	nucleus	25.17	30.75
CDY41307	Canola	cytosol	28.42	30.35
CDY22198	Canola	cytosol	28.42	29.7
HORVU1Hr1G071700.1	Barley	nucleus	25.17	28.6
HORVU7Hr1G075720.1	Barley	plasma membrane	25.17	26.92
HORVU7Hr1G024060.1	Barley	plastid	7.53	25.0
HORVU5Hr1G007780.1	Barley	cytosol	18.32	24.94
HORVU7Hr1G023980.1	Barley	nucleus	13.7	24.46
HORVU3Hr1G066840.2	Barley	cytosol	16.78	23.0
HORVU5Hr1G092660.2	Barley	nucleus	16.95	22.6
HORVU3Hr1G019240.2	Barley	mitochondrion, peroxisome	18.32	21.62
HORVU1Hr1G079590.12	Barley	cytosol	16.78	20.94
HORVU3Hr1G089690.1	Barley	cytosol	21.06	19.59

Protein Annotations

EnsemblPlants:HORVU3Hr1G117830.2	EnsemblPlantsGene:HORVU3Hr1G117830	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000048
InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR32295	PANTHER:PTHR32295:SF89	PFAM:PF00612	PFscan:PS50096	SEG:seg
SignalP:SignalP-noTM	SMART:SM00015	UniParc:UPI000B462233	UniProt:A0A287MUU8	MapMan:35.1	:

Description

No Description!

Coordinates

chrchr3H:-:699424977..699428724

Molecular Weight (calculated)

62873.5 Da

IEP (calculated)

10.828

GRAVY (calculated)

-0.552

Length

584 amino acids

Sequence
(BLAST)

001: LLLFFFFFFF SLLLPPLPVE VEVRCNEPTD PVASPHRISP FLHVLPLPAQ DKTRQDKRSK AAILILILMG KKPKWLGAVK KAFSPESKDQ KLQRRLAAAA
101: GGTSAPYPPD LTPSASYLEA RASSAPPPLR YPDDFPEASL PPPPLPLPAP APAPAPLPVP QTQTQEEHEI QHAAAAPPTD APLPAAAAPP QAQAAIVQAP
201: SSSPTLSREL AATKIQTAFR GHLARRALRA LKGLVRLKSL VQGHSVKRQA TSTLRCMQTL SRVQSKIRTR RIKMSEENQA LQRQLLLNQE LETLRMGDQW
301: NTSLQSREQI EASMVSKQEA AARRERALAY AFSHQWKSTS RSANPMFVDP SNPHWGWSWL ERWMASRPFD GRNGASEKEG SSVDRTSVNS TSLSMNLGEG
401: EMITKADNNA YSLNPVDDGK PAASTPKPSV PASRQSPSTP SPVPARKKST APKSGDGDGG DDARSVVSTV RSERPRRHSI GASSVRDDAS LSGSSPSVPS
501: YMAATKSASA RAKSRGQSPT LSEGAAHVET LEKGWSSVGS AKKRLSFPAG TPPPVPAPRR HSGPPKVRQA AVEGGTEERD SALV

Best Arabidopsis Sequence Match ( AT5G03040.2 )
(BLAST)

001: MGKKAKWFSS VKKAFSPDSK KSKQKLAEGQ NGVISNPPVV DNVRQSSSSP PPALAPREVR VAEVIVERNR DLSPPSTADA VNVTATDVPV VPSSSAPGVV
101: RRATPTRFAG KSNEEAAAIL IQTIFRGYLA RRALRAMRGL VRLKLLMEGS VVKRQAANTL KCMQTLSRVQ SQIRARRIRM SEENQARQKQ LLQKHAKELA
201: GLKNGDNWND SIQSKEKVEA NLLSKYEATM RRERALAYSY SHQQNWKNNS KSGNPMFMDP SNPTWGWSWL ERWMAGRPLE SSEKEQSNSN NDNAASVKGS
301: INRNEAAKSL TRNGSTQPNT PSSARGTPRN KNSFFSPPTP SRLNQSSRKS NDDDSKSTIS VLSERNRRHS IAGSSVRDDE SLAGSPALPS YMVPTKSARA
401: RLKPQSPLGG TTQENEGFTD KASAKKRLSY PTSPALPKPR RFSAPPKVES GGVTVTNGAG S

Arabidopsis Description

iqd2At5g03040/F15A17_70 [Source:UniProtKB/TrEMBL;Acc:Q93ZH7]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.