Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 2
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G03040.1 | CDX86457 | AT3G27960.1 | 21798944 |
| AT5G03040.1 | CDY58518 | AT3G27960.1 | 21798944 |
| AT5G03040.1 | CDX90725 | AT4G09570.1 | 19130088 |
| AT5G03040.1 | CDY05064 | AT4G09570.1 | 19130088 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX80849 | Canola | cytosol, plastid | 90.8 | 88.03 |
| CDY04876 | Canola | nucleus, plastid | 88.38 | 82.02 |
| CDY55696 | Canola | nucleus, plastid | 85.96 | 81.24 |
| CDY10410 | Canola | cytosol, plastid | 86.2 | 80.18 |
| AT5G03040.1 | Thale cress | cytosol, plastid | 86.2 | 77.22 |
| CDX70333 | Canola | cytosol | 83.78 | 72.08 |
| KRG95941 | Soybean | nucleus | 56.42 | 48.85 |
| KRH67648 | Soybean | nucleus | 54.96 | 47.59 |
| PGSC0003DMT400045333 | Potato | cytosol | 53.51 | 46.92 |
| Solyc10g084280.1.1 | Tomato | nucleus | 54.24 | 46.86 |
| KRH19825 | Soybean | cytosol | 53.27 | 46.81 |
| VIT_08s0040g02360.t01 | Wine grape | nucleus | 54.24 | 46.76 |
| Solyc10g086060.1.1 | Tomato | cytosol | 53.27 | 46.71 |
| GSMUA_Achr10P... | Banana | nucleus | 50.85 | 46.67 |
| KRH32420 | Soybean | cytosol | 53.27 | 46.41 |
| PGSC0003DMT400027139 | Potato | cytosol | 54.0 | 46.36 |
| GSMUA_Achr3P17820_001 | Banana | cytosol | 53.03 | 45.82 |
| CDX73992 | Canola | nucleus | 52.78 | 45.7 |
| PGSC0003DMT400004433 | Potato | cytosol | 53.03 | 45.62 |
| Os05t0123200-01 | Rice | plasma membrane | 52.3 | 45.57 |
| KXG21175 | Sorghum | cytosol | 51.57 | 45.03 |
| Solyc09g007410.2.1 | Tomato | cytosol | 52.54 | 44.93 |
| TraesCS1A01G064100.1 | Wheat | cytosol | 52.06 | 44.79 |
| Zm00001d035492_P009 | Maize | cytosol | 51.57 | 44.75 |
| TraesCS1D01G064700.1 | Wheat | cytosol | 51.57 | 44.56 |
| TraesCS1B01G082100.1 | Wheat | cytosol | 51.57 | 44.38 |
| HORVU1Hr1G013210.1 | Barley | cytosol | 51.82 | 44.21 |
| CDY07937 | Canola | nucleus | 51.09 | 44.14 |
| Zm00001d010975_P003 | Maize | cytosol | 50.85 | 43.93 |
| GSMUA_Achr7P22680_001 | Banana | cytosol | 48.43 | 43.01 |
| GSMUA_AchrUn_... | Banana | mitochondrion, nucleus | 47.22 | 42.48 |
| CDY41307 | Canola | cytosol | 55.45 | 41.86 |
| CDX95328 | Canola | cytosol | 45.04 | 41.8 |
| GSMUA_Achr7P18240_001 | Banana | cytosol | 47.7 | 41.74 |
| CDY22198 | Canola | cytosol | 55.93 | 41.32 |
| CDY23202 | Canola | cytosol | 44.31 | 41.12 |
| GSMUA_Achr10P... | Banana | cytosol | 41.89 | 41.0 |
| TraesCS3D01G543500.1 | Wheat | cytosol | 46.97 | 39.11 |
| Os01t0833800-01 | Rice | plasma membrane | 46.73 | 38.6 |
| TraesCS3D01G346500.1 | Wheat | cytosol | 45.76 | 37.88 |
| TraesCS3B01G385100.1 | Wheat | cytosol | 45.76 | 37.88 |
| TraesCS3A01G352500.1 | Wheat | cytosol | 45.76 | 37.88 |
| KXG33651 | Sorghum | cytosol | 45.52 | 37.75 |
| HORVU3Hr1G087500.2 | Barley | cytosol | 45.52 | 37.68 |
| TraesCS3B01G603500.1 | Wheat | cytosol, mitochondrion | 46.97 | 36.88 |
| GSMUA_Achr11P... | Banana | mitochondrion | 40.92 | 36.58 |
| Zm00001d042973_P007 | Maize | cytosol | 44.79 | 36.49 |
| TraesCS3A01G538100.1 | Wheat | cytosol, mitochondrion | 46.73 | 36.35 |
| CDY17214 | Canola | cytosol, plastid | 22.76 | 35.47 |
| CDY27925 | Canola | plastid | 22.52 | 35.09 |
| HORVU3Hr1G117830.2 | Barley | endoplasmic reticulum, extracellular | 48.18 | 34.08 |
| CDY38525 | Canola | cytosol | 32.2 | 32.2 |
| CDY62768 | Canola | cytosol | 20.58 | 30.69 |
| CDY32322 | Canola | cytosol, plastid | 17.92 | 28.57 |
| CDY37387 | Canola | cytosol | 26.39 | 28.39 |
| Os05t0463300-00 | Rice | plasma membrane | 33.41 | 27.49 |
| CDY10618 | Canola | cytosol | 26.88 | 27.34 |
| CDX77034 | Canola | cytosol | 26.15 | 27.27 |
| CDY20099 | Canola | cytosol | 17.43 | 27.27 |
| CDY24286 | Canola | cytosol | 26.63 | 27.23 |
| CDX83237 | Canola | cytosol | 33.41 | 27.22 |
| CDY35313 | Canola | nucleus | 26.15 | 27.2 |
| CDX96427 | Canola | cytosol | 15.98 | 27.16 |
| CDX92933 | Canola | cytosol, plastid | 26.15 | 26.93 |
| HORVU1Hr1G071700.1 | Barley | nucleus | 33.41 | 26.85 |
| TraesCS1D01G287100.2 | Wheat | cytosol | 34.38 | 26.84 |
| TraesCS1A01G288100.2 | Wheat | nucleus | 33.66 | 26.68 |
| TraesCS1B01G297500.1 | Wheat | cytosol | 33.41 | 26.14 |
| CDY30433 | Canola | cytosol | 28.09 | 25.78 |
| CDX72935 | Canola | cytosol | 16.22 | 25.48 |
| OQU78148 | Sorghum | cytosol | 33.9 | 25.0 |
| CDY23391 | Canola | cytosol | 27.6 | 24.73 |
| CDX92931 | Canola | mitochondrion, nucleus | 15.01 | 24.31 |
| CDX71881 | Canola | nucleus | 29.06 | 24.29 |
| CDY05984 | Canola | nucleus | 29.06 | 24.24 |
| CDY05917 | Canola | mitochondrion, nucleus | 27.36 | 23.79 |
| CDY08120 | Canola | mitochondrion, nucleus | 27.12 | 23.63 |
| CDY39505 | Canola | cytosol | 22.52 | 23.54 |
| CDY15200 | Canola | nucleus | 29.06 | 23.48 |
| CDY58749 | Canola | cytosol | 25.91 | 23.46 |
| CDX90011 | Canola | nucleus | 28.57 | 23.23 |
| CDX86983 | Canola | nucleus | 26.63 | 23.16 |
| CDY00196 | Canola | nucleus | 26.15 | 22.74 |
| CDY08131 | Canola | nucleus | 18.64 | 22.38 |
| CDY26241 | Canola | nucleus | 20.1 | 22.13 |
| CDY48305 | Canola | nucleus | 20.1 | 22.13 |
| CDY24282 | Canola | mitochondrion | 15.98 | 21.64 |
| CDY05931 | Canola | nucleus | 18.16 | 21.31 |
| CDY05111 | Canola | nucleus | 21.79 | 20.98 |
| CDY69140 | Canola | mitochondrion, nucleus | 26.63 | 20.95 |
| CDX91859 | Canola | mitochondrion, nucleus | 26.88 | 20.94 |
| CDX79809 | Canola | nucleus | 30.27 | 20.9 |
| CDY66694 | Canola | nucleus | 30.02 | 20.7 |
| CDX90766 | Canola | nucleus | 21.55 | 20.65 |
| Zm00001d038395_P005 | Maize | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 32.45 | 20.62 |
| CDY05918 | Canola | mitochondrion | 15.5 | 20.38 |
| CDX83468 | Canola | plasma membrane | 26.88 | 20.15 |
| CDY44247 | Canola | nucleus | 26.88 | 19.96 |
| CDX96426 | Canola | nucleus, plastid | 3.39 | 13.73 |
| CDX72934 | Canola | nucleus, plastid | 3.39 | 13.73 |
Protein Annotations
| EnsemblPlants:CDY11238 | EnsemblPlantsGene:GSBRNA2T00049259001 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR000048 |
| InterPro:IQ_motif_EF-hand-BS | PANTHER:PTHR32295 | PANTHER:PTHR32295:SF28 | PFAM:PF00612 | PFscan:PS50096 | ProteinID:CDY11238 |
| ProteinID:CDY11238.1 | SEG:seg | SMART:SM00015 | UniParc:UPI0004EE43CF | UniProt:A0A078FGQ3 | MapMan:35.1 |
Description
BnaA03g00740DBnaA03g00740D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FGQ3]
Coordinates
chrLK032010:-:312657..314790
Molecular Weight (calculated)
45668.3 Da
IEP (calculated)
11.332
GRAVY (calculated)
-0.864
Length
413 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKKAKWFSS VKKAFSPNSK SKHKSPESPN GVVSNPPPQP DNARQPSLPP PPPPLEVRVA EVIVEQNKNL SPPSTNAVNA STTDVPAVVV PSSSAPPEVV
101: RRRATATRFP GKSNEEAAAI LIQTVFRGYL ARRALRAMRG LVRLKLLMEG SVVKRQAANT LKCMQTLSRV QSQIRARRIR MSEENQARQK QLLQKHAKEL
201: AGLKNGGNWD DSIQSKEKVE AKLLSKYEAT MRRERALAYA YSHQQNWKNN SKSGNPMFMD PSNPTWGWSW LERWMAGRPL EEPNNDTKSI NRKNSFFSPP
301: TPSRLNHSSR KSKDEDDAKS TISALSERNR RHSIGGSSVR DDESLAGSQT LPSYMVPTKS ARARVNKPQS PPSSDKASAK KRLSYPSSPA LPKPRRFSAP
401: PKVEVGVTNG VGS
101: RRRATATRFP GKSNEEAAAI LIQTVFRGYL ARRALRAMRG LVRLKLLMEG SVVKRQAANT LKCMQTLSRV QSQIRARRIR MSEENQARQK QLLQKHAKEL
201: AGLKNGGNWD DSIQSKEKVE AKLLSKYEAT MRRERALAYA YSHQQNWKNN SKSGNPMFMD PSNPTWGWSW LERWMAGRPL EEPNNDTKSI NRKNSFFSPP
301: TPSRLNHSSR KSKDEDDAKS TISALSERNR RHSIGGSSVR DDESLAGSQT LPSYMVPTKS ARARVNKPQS PPSSDKASAK KRLSYPSSPA LPKPRRFSAP
401: PKVEVGVTNG VGS
001: MGKKAKWFSS VKKAFSPDSK KSKQKLAEGQ NGVISNPPVV DNVRQSSSSP PPALAPREVR VAEVIVERNR DLSPPSTADA VNVTATDVPV VPSSSAPGVV
101: RRATPTRFAG KSNEEAAAIL IQTIFRGYLA RRALRAMRGL VRLKLLMEGS VVKRQAANTL KCMQTLSRVQ SQIRARRIRM SEENQARQKQ LLQKHAKELA
201: GLKNGDNWND SIQSKEKVEA NLLSKYEATM RRERALAYSY SHQQNWKNNS KSGNPMFMDP SNPTWGWSWL ERWMAGRPLE SSEKEQSNSN NDNAASVKGS
301: INRNEAAKSL TRNGSTQPNT PSSARGTPRN KNSFFSPPTP SRLNQSSRKS NDDDSKSTIS VLSERNRRHS IAGSSVRDDE SLAGSPALPS YMVPTKSARA
401: RLKPQSPLGG TTQENEGFTD KASAKKRLSY PTSPALPKPR RFSAPPKVES GGVTVTNGAG S
101: RRATPTRFAG KSNEEAAAIL IQTIFRGYLA RRALRAMRGL VRLKLLMEGS VVKRQAANTL KCMQTLSRVQ SQIRARRIRM SEENQARQKQ LLQKHAKELA
201: GLKNGDNWND SIQSKEKVEA NLLSKYEATM RRERALAYSY SHQQNWKNNS KSGNPMFMDP SNPTWGWSWL ERWMAGRPLE SSEKEQSNSN NDNAASVKGS
301: INRNEAAKSL TRNGSTQPNT PSSARGTPRN KNSFFSPPTP SRLNQSSRKS NDDDSKSTIS VLSERNRRHS IAGSSVRDDE SLAGSPALPS YMVPTKSARA
401: RLKPQSPLGG TTQENEGFTD KASAKKRLSY PTSPALPKPR RFSAPPKVES GGVTVTNGAG S
Arabidopsis Description
iqd2At5g03040/F15A17_70 [Source:UniProtKB/TrEMBL;Acc:Q93ZH7]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.