CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EES05647
EES09373
EES16732

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G03040.1	EES05647	AT3G27960.1	21798944
AT5G03040.1	EES09373	AT4G09570.1	19130088
AT5G03040.1	EES16732	AT4G09570.1	19130088

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d010975_P003	Maize	cytosol	91.75	90.8
Os05t0123200-01	Rice	plasma membrane	85.41	85.23
HORVU1Hr1G013210.1	Barley	cytosol	80.97	79.13
TraesCS1D01G064700.1	Wheat	cytosol	79.92	79.08
TraesCS1B01G082100.1	Wheat	cytosol	79.92	78.75
TraesCS1A01G064100.1	Wheat	cytosol	79.92	78.75
GSMUA_Achr3P17820_001	Banana	cytosol	62.58	61.92
GSMUA_Achr10P...	Banana	nucleus	57.51	60.44
GSMUA_Achr7P18240_001	Banana	cytosol	53.91	54.03
VIT_08s0040g02360.t01	Wine grape	nucleus	54.55	53.86
KRH67648	Soybean	nucleus	53.49	53.04
KRG95941	Soybean	nucleus	53.49	53.04
CDY11238	Canola	cytosol, plastid	45.03	51.57
KRH19825	Soybean	cytosol	51.16	51.49
KRH32420	Soybean	cytosol	51.59	51.48
Solyc10g084280.1.1	Tomato	nucleus	52.01	51.46
PGSC0003DMT400027139	Potato	cytosol	51.8	50.94
PGSC0003DMT400004433	Potato	cytosol	51.16	50.42
Solyc10g086060.1.1	Tomato	cytosol	49.68	49.89
PGSC0003DMT400045333	Potato	cytosol	49.68	49.89
CDX80849	Canola	cytosol, plastid	44.82	49.77
Solyc09g007410.2.1	Tomato	cytosol	50.74	49.69
CDY04876	Canola	nucleus, plastid	44.82	47.64
CDY10410	Canola	cytosol, plastid	44.61	47.52
Bra028854.1-P	Field mustard	nucleus, plastid	44.61	47.42
CDY55696	Canola	nucleus, plastid	43.76	47.37
AT5G03040.1	Thale cress	cytosol, plastid	45.88	47.07
KXG33651	Sorghum	cytosol	47.78	45.38
Bra009554.1-P	Field mustard	cytosol	42.92	43.1
AT3G09710.2	Thale cress	nucleus	42.49	42.95
CDX70333	Canola	cytosol	43.55	42.92
Bra034081.1-P	Field mustard	nucleus	38.9	41.44
Bra001299.1-P	Field mustard	nucleus	36.15	36.15
CDX73992	Canola	nucleus	36.15	35.85
CDY07937	Canola	nucleus	34.88	34.52
CDY41307	Canola	cytosol	39.32	34.0
CDY22198	Canola	cytosol	39.53	33.45
EER87873	Sorghum	nucleus	21.14	30.03
OQU86150	Sorghum	cytosol	26.22	27.93
OQU78148	Sorghum	cytosol	31.08	26.25
KXG24027	Sorghum	cytosol	24.1	25.91
EER90769	Sorghum	mitochondrion	24.1	25.91
EES14418	Sorghum	cytosol	29.6	24.39
EES03502	Sorghum	mitochondrion	22.41	24.26
EER91163	Sorghum	cytosol	21.14	23.7
EES01898	Sorghum	cytosol	27.48	23.09
KXG22437	Sorghum	mitochondrion, plastid	23.47	20.33

Protein Annotations

EnsemblPlants:KXG21175	EnsemblPlantsGene:SORBI_3009G026200	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000048
InterPro:IQ_motif_EF-hand-BS	ncoils:Coil	PANTHER:PTHR32295	PANTHER:PTHR32295:SF89	PFAM:PF00612	PFscan:PS50096
ProteinID:KXG21174.1	ProteinID:KXG21175	ProteinID:KXG21175.1	ProteinID:KXG21176.1	SEG:seg	SMART:SM00015
UniParc:UPI0001C806B7	UniProt:A0A1B6P662	MapMan:35.1	:	:	:

Description

hypothetical protein

Coordinates

chr9:+:2329586..2333623

Molecular Weight (calculated)

51944.6 Da

IEP (calculated)

10.921

GRAVY (calculated)

-0.793

Length

473 amino acids

Sequence
(BLAST)

001: MGKKGKWFGA VKKVFSPESK EKKEERLRRK SAASNPAPLD LTPSTSLEVN VSVPPPPAPA PPPVLHQAEE VRVPEPEQEQ SKHVTVEEPP AVPAQPSVLP
101: PGVPTEELAA VKIQTAFRGY LARRALRALR GLVRLKSLVE GNSVKRQSAS TLRCMQTLSR VQSQIRSRRA KMSEENQALQ RQLLLKQELE NFRMGENWDD
201: STQSKEQIEA SLISRQEAAI RRERALAYAF SHQWKSTSRS VNPMFVDPNN LQWGWSWLER WMAAKPWEGR NGADKESNFD RGSVKSMSLN LGEGEITKAF
301: NRRDSKPEKP SPPTPKPTRP AWQSPSTPSA KVAPIPARRK SATPKNGLSQ VDDDARSVLS VQSERPRRHS IATSTVRDDE SLASSPSLPS YMVPTESARA
401: KSRLQGSSMT NGAETPEKGG STGPVKKRLS FQGGTAAASP MRRHSGPPKV ESAVKDIVAP PQPEALVVNG GSK

Best Arabidopsis Sequence Match ( AT5G03040.2 )
(BLAST)

001: MGKKAKWFSS VKKAFSPDSK KSKQKLAEGQ NGVISNPPVV DNVRQSSSSP PPALAPREVR VAEVIVERNR DLSPPSTADA VNVTATDVPV VPSSSAPGVV
101: RRATPTRFAG KSNEEAAAIL IQTIFRGYLA RRALRAMRGL VRLKLLMEGS VVKRQAANTL KCMQTLSRVQ SQIRARRIRM SEENQARQKQ LLQKHAKELA
201: GLKNGDNWND SIQSKEKVEA NLLSKYEATM RRERALAYSY SHQQNWKNNS KSGNPMFMDP SNPTWGWSWL ERWMAGRPLE SSEKEQSNSN NDNAASVKGS
301: INRNEAAKSL TRNGSTQPNT PSSARGTPRN KNSFFSPPTP SRLNQSSRKS NDDDSKSTIS VLSERNRRHS IAGSSVRDDE SLAGSPALPS YMVPTKSARA
401: RLKPQSPLGG TTQENEGFTD KASAKKRLSY PTSPALPKPR RFSAPPKVES GGVTVTNGAG S

Arabidopsis Description

iqd2At5g03040/F15A17_70 [Source:UniProtKB/TrEMBL;Acc:Q93ZH7]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.