Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra001299.1-P | Field mustard | nucleus | 91.4 | 92.18 |
| CDY07937 | Canola | nucleus | 91.61 | 91.42 |
| AT3G09710.2 | Thale cress | nucleus | 62.68 | 63.89 |
| CDY22198 | Canola | cytosol | 66.67 | 56.89 |
| CDY41307 | Canola | cytosol | 64.36 | 56.12 |
| CDY11238 | Canola | cytosol, plastid | 45.7 | 52.78 |
| CDX80849 | Canola | cytosol, plastid | 46.54 | 52.11 |
| CDY10410 | Canola | cytosol, plastid | 48.43 | 52.03 |
| CDY04876 | Canola | nucleus, plastid | 47.59 | 51.01 |
| CDY55696 | Canola | nucleus, plastid | 46.33 | 50.57 |
| CDX70333 | Canola | cytosol | 47.59 | 47.29 |
| KRG95941 | Soybean | nucleus | 39.83 | 39.83 |
| KRH67648 | Soybean | nucleus | 38.78 | 38.78 |
| VIT_08s0040g02360.t01 | Wine grape | nucleus | 38.57 | 38.41 |
| KRH19825 | Soybean | cytosol | 36.9 | 37.45 |
| KRH32420 | Soybean | cytosol | 36.9 | 37.13 |
| KXG21175 | Sorghum | cytosol | 35.85 | 36.15 |
| Zm00001d035492_P009 | Maize | cytosol | 35.64 | 35.71 |
| GSMUA_Achr10P... | Banana | nucleus | 33.54 | 35.56 |
| Os05t0123200-01 | Rice | plasma membrane | 35.22 | 35.44 |
| PGSC0003DMT400004433 | Potato | cytosol | 35.64 | 35.42 |
| GSMUA_Achr3P17820_001 | Banana | cytosol | 35.43 | 35.36 |
| TraesCS1A01G064100.1 | Wheat | cytosol | 35.43 | 35.21 |
| TraesCS1D01G064700.1 | Wheat | cytosol | 35.22 | 35.15 |
| PGSC0003DMT400045333 | Potato | cytosol | 34.59 | 35.03 |
| Solyc10g086060.1.1 | Tomato | cytosol | 34.59 | 35.03 |
| TraesCS1B01G082100.1 | Wheat | cytosol | 35.22 | 35.0 |
| GSMUA_Achr7P18240_001 | Banana | cytosol | 34.59 | 34.96 |
| Zm00001d010975_P003 | Maize | cytosol | 35.01 | 34.94 |
| Solyc09g007410.2.1 | Tomato | cytosol | 35.22 | 34.78 |
| HORVU1Hr1G013210.1 | Barley | cytosol | 35.22 | 34.71 |
| Solyc10g084280.1.1 | Tomato | nucleus | 34.59 | 34.52 |
| PGSC0003DMT400027139 | Potato | cytosol | 34.59 | 34.3 |
| GSMUA_Achr7P22680_001 | Banana | cytosol | 31.24 | 32.04 |
| CDX95328 | Canola | cytosol | 29.56 | 31.69 |
| GSMUA_AchrUn_... | Banana | mitochondrion, nucleus | 30.4 | 31.59 |
| GSMUA_Achr10P... | Banana | cytosol | 27.88 | 31.52 |
| CDY23202 | Canola | cytosol | 29.14 | 31.24 |
| TraesCS3D01G543500.1 | Wheat | cytosol | 32.08 | 30.85 |
| TraesCS3B01G603500.1 | Wheat | cytosol, mitochondrion | 31.87 | 28.9 |
| HORVU3Hr1G087500.2 | Barley | cytosol | 29.56 | 28.26 |
| TraesCS3A01G352500.1 | Wheat | cytosol | 29.56 | 28.26 |
| TraesCS3B01G385100.1 | Wheat | cytosol | 29.56 | 28.26 |
| TraesCS3D01G346500.1 | Wheat | cytosol | 29.56 | 28.26 |
| TraesCS3A01G538100.1 | Wheat | cytosol, mitochondrion | 31.45 | 28.25 |
| Os01t0833800-01 | Rice | plasma membrane | 29.35 | 28.0 |
| KXG33651 | Sorghum | cytosol | 28.93 | 27.71 |
| GSMUA_Achr11P... | Banana | mitochondrion | 26.62 | 27.49 |
| CDY17214 | Canola | cytosol, plastid | 15.09 | 27.17 |
| CDY27925 | Canola | plastid | 15.09 | 27.17 |
| Zm00001d042973_P007 | Maize | cytosol | 28.51 | 26.82 |
| HORVU3Hr1G117830.2 | Barley | endoplasmic reticulum, extracellular | 32.29 | 26.37 |
| CDY38525 | Canola | cytosol | 22.01 | 25.42 |
| CDY32322 | Canola | cytosol, plastid | 12.79 | 23.55 |
| CDY62768 | Canola | cytosol | 13.42 | 23.1 |
| CDY37387 | Canola | cytosol | 17.82 | 22.14 |
| CDY20099 | Canola | cytosol | 12.16 | 21.97 |
| CDX83237 | Canola | cytosol | 23.06 | 21.7 |
| CDY10618 | Canola | cytosol | 18.24 | 21.43 |
| HORVU1Hr1G071700.1 | Barley | nucleus | 22.85 | 21.21 |
| OQU78148 | Sorghum | cytosol | 24.53 | 20.89 |
| CDY24286 | Canola | cytosol | 17.61 | 20.79 |
| TraesCS1D01G287100.2 | Wheat | cytosol | 22.85 | 20.6 |
| TraesCS1A01G288100.2 | Wheat | nucleus | 22.43 | 20.54 |
| CDX92933 | Canola | cytosol, plastid | 17.19 | 20.45 |
| CDY35313 | Canola | nucleus | 16.98 | 20.4 |
| Os05t0463300-00 | Rice | plasma membrane | 21.38 | 20.32 |
| CDX96427 | Canola | cytosol | 10.27 | 20.16 |
| CDX77034 | Canola | cytosol | 16.56 | 19.95 |
| TraesCS1B01G297500.1 | Wheat | cytosol | 21.59 | 19.51 |
| CDX72935 | Canola | cytosol | 10.69 | 19.39 |
| CDX92931 | Canola | mitochondrion, nucleus | 9.64 | 18.04 |
| CDX90766 | Canola | nucleus | 16.14 | 17.87 |
| CDY30433 | Canola | cytosol | 16.77 | 17.78 |
| CDY05111 | Canola | nucleus | 15.93 | 17.72 |
| CDY58749 | Canola | cytosol | 16.77 | 17.54 |
| CDY15200 | Canola | nucleus | 18.66 | 17.42 |
| CDX90011 | Canola | nucleus | 18.45 | 17.32 |
| CDY05984 | Canola | nucleus | 17.82 | 17.17 |
| CDY08131 | Canola | nucleus | 12.37 | 17.15 |
| Zm00001d038395_P005 | Maize | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 23.27 | 17.08 |
| CDX71881 | Canola | nucleus | 17.61 | 17.0 |
| CDX91859 | Canola | mitochondrion, nucleus | 18.66 | 16.79 |
| CDY69140 | Canola | mitochondrion, nucleus | 18.24 | 16.57 |
| CDY23391 | Canola | cytosol | 15.93 | 16.49 |
| CDY05931 | Canola | nucleus | 12.16 | 16.48 |
| CDY39505 | Canola | cytosol | 13.63 | 16.46 |
| CDY08120 | Canola | mitochondrion, nucleus | 15.93 | 16.03 |
| CDY05917 | Canola | mitochondrion, nucleus | 15.93 | 16.0 |
| CDY48305 | Canola | nucleus | 12.58 | 16.0 |
| CDY26241 | Canola | nucleus | 12.37 | 15.73 |
| CDX83468 | Canola | plasma membrane | 18.03 | 15.61 |
| CDY24282 | Canola | mitochondrion | 9.64 | 15.08 |
| CDY44247 | Canola | nucleus | 17.4 | 14.93 |
| CDX86983 | Canola | nucleus | 14.68 | 14.74 |
| CDY00196 | Canola | nucleus | 14.47 | 14.53 |
| CDX79809 | Canola | nucleus | 17.82 | 14.21 |
| CDY66694 | Canola | nucleus | 17.4 | 13.86 |
| CDY05918 | Canola | mitochondrion | 8.81 | 13.38 |
| CDX72934 | Canola | nucleus, plastid | 1.05 | 4.9 |
| CDX96426 | Canola | nucleus, plastid | 1.05 | 4.9 |
Protein Annotations
| EnsemblPlants:CDX73992 | EnsemblPlantsGene:GSBRNA2T00111725001 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR000048 |
| InterPro:IQ_motif_EF-hand-BS | PANTHER:PTHR32295 | PANTHER:PTHR32295:SF28 | PFAM:PF00612 | PFscan:PS50096 | ProteinID:CDX73992 |
| ProteinID:CDX73992.1 | SEG:seg | SMART:SM00015 | UniParc:UPI0004EE09DF | MapMan:35.1 | : |
Description
BnaA03g30550D
Coordinates
chrLK031800:-:829216..831267
Molecular Weight (calculated)
53405.6 Da
IEP (calculated)
11.280
GRAVY (calculated)
-0.955
Length
477 amino acids
Sequence
(BLAST)
(BLAST)
001: MVKKAKWLEN VKKAFSPDVK KLKHQSVEES VISYPVLVAR SRSSPPQFEV RVDEVNYEHR KKKNLSPPPS EEQENVLGDS TPESVPPPVA PDRFAGEEAA
101: AIFIQSTFRG HLARREALRM RRWARLKLLM EGLVVQRQAA NTLRSMQTFT RMQSKIRSMR IRMAEENQVR HKHLLQKHAK ELRGSKNGVN NQSKKQVEAG
201: LLNKNEAATM RKERALAYAS THQQHLKSNL KSTNTMFIMD PSNLTWGWSW LERWTADKER SEKEQSNTVK PSVKTTTNRY SHGGETAKSS NRKKLSSLTQ
301: TSTPSTSSST TKNPRNNKPT PPSIRPKTTD EIPKSSEKNR RNIISRSSVS DDEGLVSSTA RRHNMVPTKP ANEIPKSSEK NPSRHIIARS SVSDDEGLAS
401: SVARRRNMVP AKPARGNLKA QSSAAATKAT KEESIDVLRE KAPAAKKRVS PAPKPRRSSA PSKVENSVLK AVKTPCA
101: AIFIQSTFRG HLARREALRM RRWARLKLLM EGLVVQRQAA NTLRSMQTFT RMQSKIRSMR IRMAEENQVR HKHLLQKHAK ELRGSKNGVN NQSKKQVEAG
201: LLNKNEAATM RKERALAYAS THQQHLKSNL KSTNTMFIMD PSNLTWGWSW LERWTADKER SEKEQSNTVK PSVKTTTNRY SHGGETAKSS NRKKLSSLTQ
301: TSTPSTSSST TKNPRNNKPT PPSIRPKTTD EIPKSSEKNR RNIISRSSVS DDEGLVSSTA RRHNMVPTKP ANEIPKSSEK NPSRHIIARS SVSDDEGLAS
401: SVARRRNMVP AKPARGNLKA QSSAAATKAT KEESIDVLRE KAPAAKKRVS PAPKPRRSSA PSKVENSVLK AVKTPCA
001: MVKKAKWLKN VKKAFSPDSK KLKHESVECQ DSVISYPVLI ATSRSSSPQF EVRVDEVNYE QKKNLYPPSS DSVTATVAHV LVDSPPSSPE SVHQAIVVNR
101: FAGKSKEEAA AILIQSTFRG HLARRESQVM RGQERLKLLM EGSVVQRQAA ITLKCMQTLS RVQSQIRSRR IRMSEENQAR HKQLLQKHAK ELGGLKNGGN
201: WNYSNQSKEQ VEAGMLHKYE ATMRRERALA YAFTHQQNLK SFSKTANPMF MDPSNPTWGW SWLERWMAGR PWESSEKEQN TTNNDNSSVK NSTNRNSQGG
301: ETAKSSNRNK LNSSTKPNTP SASSTATRNP RKKRPIPSSI KSKSSDDEAK SSERNRRPSI ARPSVSDDET LSSSTARRSS NLIPTTKSAR GKPKSQTSSR
401: VAVTTSTTEE SSILPEKAPA KKRLSTSASP APKPRRSSAP PKVEKGVLKA ERTP
101: FAGKSKEEAA AILIQSTFRG HLARRESQVM RGQERLKLLM EGSVVQRQAA ITLKCMQTLS RVQSQIRSRR IRMSEENQAR HKQLLQKHAK ELGGLKNGGN
201: WNYSNQSKEQ VEAGMLHKYE ATMRRERALA YAFTHQQNLK SFSKTANPMF MDPSNPTWGW SWLERWMAGR PWESSEKEQN TTNNDNSSVK NSTNRNSQGG
301: ETAKSSNRNK LNSSTKPNTP SASSTATRNP RKKRPIPSSI KSKSSDDEAK SSERNRRPSI ARPSVSDDET LSSSTARRSS NLIPTTKSAR GKPKSQTSSR
401: VAVTTSTTEE SSILPEKAPA KKRLSTSASP APKPRRSSAP PKVEKGVLKA ERTP
Arabidopsis Description
IQD1IQ-domain 1 [Source:UniProtKB/TrEMBL;Acc:F4J1A4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.