Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- mitochondrion 3
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY24286 | Canola | cytosol | 96.51 | 95.79 |
| Bra001855.1-P | Field mustard | cytosol | 78.55 | 91.84 |
| CDX92931 | Canola | mitochondrion, nucleus | 56.36 | 88.63 |
| CDY10618 | Canola | cytosol | 83.54 | 82.51 |
| CDY37387 | Canola | cytosol | 77.56 | 80.99 |
| AT3G22190.2 | Thale cress | cytosol | 84.04 | 79.86 |
| CDY39505 | Canola | cytosol | 73.57 | 74.68 |
| CDY58749 | Canola | cytosol | 76.31 | 67.11 |
| CDY24282 | Canola | mitochondrion | 50.62 | 66.56 |
| VIT_06s0009g00210.t01 | Wine grape | cytosol | 59.1 | 53.26 |
| KRH26707 | Soybean | cytosol | 53.87 | 51.18 |
| Solyc11g071840.1.1 | Tomato | cytosol | 57.11 | 51.12 |
| KRH22612 | Soybean | cytosol | 53.87 | 50.82 |
| KRH39086 | Soybean | cytosol | 53.12 | 49.08 |
| GSMUA_Achr4P31410_001 | Banana | cytosol | 52.12 | 47.5 |
| Os03t0787200-01 | Rice | cytosol | 47.88 | 45.5 |
| GSMUA_Achr5P02600_001 | Banana | cytosol | 49.13 | 44.87 |
| GSMUA_Achr4P22800_001 | Banana | cytosol | 47.88 | 44.24 |
| Os12t0619000-01 | Rice | cytosol | 48.13 | 43.67 |
| EER90769 | Sorghum | mitochondrion | 47.38 | 43.18 |
| HORVU5Hr1G007780.1 | Barley | cytosol | 45.89 | 42.89 |
| TraesCS5B01G427800.1 | Wheat | cytosol, mitochondrion | 45.89 | 42.79 |
| TraesCS5A01G425800.1 | Wheat | cytosol, mitochondrion | 45.89 | 42.79 |
| TraesCS5D01G037300.2 | Wheat | nucleus | 45.89 | 42.79 |
| Zm00001d034366_P003 | Maize | mitochondrion | 47.63 | 42.73 |
| TraesCS5A01G029600.3 | Wheat | nucleus | 45.89 | 42.4 |
| KXG24027 | Sorghum | cytosol | 46.13 | 42.05 |
| Os03t0648300-01 | Rice | cytosol | 45.64 | 41.59 |
| TraesCSU01G076200.1 | Wheat | cytosol, mitochondrion | 44.39 | 41.4 |
| TraesCS5B01G028200.1 | Wheat | nucleus | 44.89 | 40.63 |
| TraesCS5B01G375000.1 | Wheat | nucleus | 42.64 | 39.22 |
| TraesCS5D01G382500.1 | Wheat | nucleus | 42.39 | 38.81 |
| TraesCS5A01G373000.1 | Wheat | nucleus | 42.14 | 38.76 |
| CDX96427 | Canola | cytosol | 23.44 | 38.68 |
| EER91163 | Sorghum | cytosol | 40.65 | 38.63 |
| Zm00001d033211_P002 | Maize | cytosol | 40.9 | 38.23 |
| HORVU5Hr1G092660.2 | Barley | nucleus | 41.65 | 38.13 |
| Zm00001d031098_P004 | Maize | cytosol | 47.13 | 37.43 |
| Zm00001d013112_P011 | Maize | mitochondrion | 46.63 | 37.1 |
| CDX72935 | Canola | cytosol | 23.69 | 36.12 |
| CDY27925 | Canola | plastid | 22.69 | 34.34 |
| CDY17214 | Canola | cytosol, plastid | 22.69 | 34.34 |
| CDX77034 | Canola | cytosol | 32.67 | 33.08 |
| CDY35313 | Canola | nucleus | 32.42 | 32.75 |
| CDY32322 | Canola | cytosol, plastid | 20.45 | 31.66 |
| CDY20099 | Canola | cytosol | 20.45 | 31.06 |
| CDY62768 | Canola | cytosol | 20.45 | 29.6 |
| CDY26241 | Canola | nucleus | 25.44 | 27.2 |
| CDY48305 | Canola | nucleus | 25.44 | 27.2 |
| CDY11238 | Canola | cytosol, plastid | 26.93 | 26.15 |
| CDX80849 | Canola | cytosol, plastid | 27.18 | 25.59 |
| CDY04876 | Canola | nucleus, plastid | 27.68 | 24.94 |
| CDY55696 | Canola | nucleus, plastid | 27.18 | 24.94 |
| CDY23202 | Canola | cytosol | 26.68 | 24.04 |
| CDX95328 | Canola | cytosol | 26.43 | 23.82 |
| CDY10410 | Canola | cytosol, plastid | 26.18 | 23.65 |
| CDX90766 | Canola | nucleus | 24.19 | 22.51 |
| CDY08120 | Canola | mitochondrion, nucleus | 26.18 | 22.15 |
| CDY05111 | Canola | nucleus | 23.69 | 22.14 |
| CDY15200 | Canola | nucleus | 28.18 | 22.11 |
| CDY05917 | Canola | mitochondrion, nucleus | 26.18 | 22.11 |
| CDX90011 | Canola | nucleus | 27.93 | 22.05 |
| CDY00196 | Canola | nucleus | 25.69 | 21.68 |
| CDX86983 | Canola | nucleus | 25.69 | 21.68 |
| CDX70333 | Canola | cytosol | 25.94 | 21.67 |
| CDY08131 | Canola | nucleus | 17.96 | 20.93 |
| CDY38525 | Canola | cytosol | 21.45 | 20.82 |
| CDY05931 | Canola | nucleus | 17.96 | 20.45 |
| CDY05984 | Canola | nucleus | 23.94 | 19.39 |
| CDX91859 | Canola | mitochondrion, nucleus | 25.44 | 19.25 |
| CDX71881 | Canola | nucleus | 23.69 | 19.23 |
| CDY05918 | Canola | mitochondrion | 14.96 | 19.11 |
| CDY69140 | Canola | mitochondrion, nucleus | 24.69 | 18.86 |
| CDY30433 | Canola | cytosol | 20.95 | 18.67 |
| CDY23391 | Canola | cytosol | 20.45 | 17.79 |
| CDX73992 | Canola | nucleus | 20.45 | 17.19 |
| CDX83237 | Canola | cytosol | 21.7 | 17.16 |
| CDY07937 | Canola | nucleus | 20.45 | 17.15 |
| CDY41307 | Canola | cytosol | 22.94 | 16.82 |
| CDY22198 | Canola | cytosol | 22.44 | 16.1 |
| CDX79809 | Canola | nucleus | 22.19 | 14.88 |
| CDY66694 | Canola | nucleus | 22.19 | 14.86 |
| CDX83468 | Canola | plasma membrane | 19.95 | 14.52 |
| CDY44247 | Canola | nucleus | 19.2 | 13.85 |
| CDX72934 | Canola | nucleus, plastid | 2.49 | 9.8 |
| CDX96426 | Canola | nucleus, plastid | 2.49 | 9.8 |
Protein Annotations
| EnsemblPlants:CDX92933 | EnsemblPlantsGene:GSBRNA2T00154796001 | Gene3D:1.20.5.190 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR000048 | InterPro:IQ_motif_EF-hand-BS | PANTHER:PTHR32295 | PANTHER:PTHR32295:SF12 | PFAM:PF00612 | PFscan:PS50096 |
| ProteinID:CDX92933 | ProteinID:CDX92933.1 | SEG:seg | SMART:SM00015 | UniParc:UPI0004EDFA42 | MapMan:35.2 |
Description
BnaA03g36550D
Coordinates
chrLK031874:-:146183..148747
Molecular Weight (calculated)
44593.9 Da
IEP (calculated)
11.426
GRAVY (calculated)
-0.752
Length
401 amino acids
Sequence
(BLAST)
(BLAST)
001: MGASGRWIKA LVGFTKSKSS KKDNNVNIAT KSRFGRKHSV DFNAEKFQDG LEDLNFHSVI DAGVSTSTSL QSYAAPCEEQ RKEHMAATRI QSAFRAFLAR
101: RALRALKGLV RLQALVRGHV VRKQAAVTLR CMQALVRVQA RVRARRVRLS LECETGQQTL QQQVADKARV REIEEGWCDS IGSVEQIQGK LIKRQEAAAK
201: RERAMAYALT HQWQAGTRQL SAHSGFQPDK NNWGWNWLER WMAVRPWENR FLDSSNLRED ANLNNMEQCE SVHKTQTKSA SRMPNTSTLV SGGVSSGKAT
301: GPSMSDNDSS SPGSIPVVSK ARSKLAKDDL AVEVNSRRPG AVPRSHSNPK ERSSKERLSL PNTGKSLGSQ SAKAIRAGKH TQTSAQNQRR RNSDPIRQRL
401: A
101: RALRALKGLV RLQALVRGHV VRKQAAVTLR CMQALVRVQA RVRARRVRLS LECETGQQTL QQQVADKARV REIEEGWCDS IGSVEQIQGK LIKRQEAAAK
201: RERAMAYALT HQWQAGTRQL SAHSGFQPDK NNWGWNWLER WMAVRPWENR FLDSSNLRED ANLNNMEQCE SVHKTQTKSA SRMPNTSTLV SGGVSSGKAT
301: GPSMSDNDSS SPGSIPVVSK ARSKLAKDDL AVEVNSRRPG AVPRSHSNPK ERSSKERLSL PNTGKSLGSQ SAKAIRAGKH TQTSAQNQRR RNSDPIRQRL
401: A
001: MGASGRWIKA LVGFTKSDKS RSSKKDENVK VATKSRFGRK NSVDFDFEKF QDGFEDSNTR SMVDTGVSTS TSLQSYGGVA YDEQSRENRA ATRIQTAYRG
101: FLARRALRAL KGLVRLQALV RGHAVRKQAA VTLRCMQALV RVQARVRARR VRLALELESE TSQQTLQQQL ADEARVREIE EGWCDSIGSV EQIQAKLLKR
201: QEAAAKRERA MAYALTHQWQ AGTRLLSAHS GFQPDKNNWG WNWLERWMAV RPWENRFLDS NLRDDAKLGE NGMEQSENVP KTQIKSVSKM PNTSNLVSGV
301: SSQMTGPCQS DGDSSSPGIS SSIPVVSKAK SKPAKDDLAV EVNSRPGAGP RSHSNPKERS REPNRSSKER LSLPNSGKSL GSQSTKANRA GKLTPASQKV
401: VEEKSAQNQR RRNSDPIKQR LA
101: FLARRALRAL KGLVRLQALV RGHAVRKQAA VTLRCMQALV RVQARVRARR VRLALELESE TSQQTLQQQL ADEARVREIE EGWCDSIGSV EQIQAKLLKR
201: QEAAAKRERA MAYALTHQWQ AGTRLLSAHS GFQPDKNNWG WNWLERWMAV RPWENRFLDS NLRDDAKLGE NGMEQSENVP KTQIKSVSKM PNTSNLVSGV
301: SSQMTGPCQS DGDSSSPGIS SSIPVVSKAK SKPAKDDLAV EVNSRPGAGP RSHSNPKERS REPNRSSKER LSLPNSGKSL GSQSTKANRA GKLTPASQKV
401: VEEKSAQNQR RRNSDPIKQR LA
Arabidopsis Description
IQD5IQD5 [Source:UniProtKB/TrEMBL;Acc:A0A178VHN2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.