CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH22612	Soybean	cytosol	90.52	89.88
KRH39086	Soybean	cytosol	77.49	75.35
VIT_06s0009g00210.t01	Wine grape	cytosol	63.74	60.45
CDY37387	Canola	cytosol	53.55	58.85
Bra031331.1-P	Field mustard	cytosol	53.08	58.33
Solyc11g071840.1.1	Tomato	cytosol	61.85	58.26
CDY10618	Canola	cytosol	54.5	56.65
CDY24286	Canola	cytosol	52.37	54.7
AT3G22190.2	Thale cress	cytosol	54.5	54.5
CDX92933	Canola	cytosol, plastid	51.18	53.87
GSMUA_Achr4P31410_001	Banana	cytosol	53.55	51.36
GSMUA_Achr5P02600_001	Banana	cytosol	53.08	51.03
GSMUA_Achr4P22800_001	Banana	cytosol	50.47	49.08
Bra001855.1-P	Field mustard	cytosol	39.81	48.98
CDY39505	Canola	cytosol	44.31	47.34
Os03t0787200-01	Rice	cytosol	46.92	46.92
CDX92931	Canola	mitochondrion, nucleus	28.2	46.67
CDY58749	Canola	cytosol	50.24	46.49
EER90769	Sorghum	mitochondrion	47.16	45.23
TraesCS5B01G427800.1	Wheat	cytosol, mitochondrion	45.97	45.12
Os12t0619000-01	Rice	cytosol	47.16	45.02
TraesCS5A01G425800.1	Wheat	cytosol, mitochondrion	45.5	44.65
KXG24027	Sorghum	cytosol	45.97	44.09
Zm00001d034366_P003	Maize	mitochondrion	46.68	44.07
Bra023846.1-P	Field mustard	cytosol	42.89	43.41
TraesCS5D01G037300.2	Wheat	nucleus	43.6	42.79
HORVU5Hr1G007780.1	Barley	cytosol	43.36	42.66
TraesCSU01G076200.1	Wheat	cytosol, mitochondrion	43.36	42.56
TraesCS5B01G375000.1	Wheat	nucleus	43.84	42.43
TraesCS5A01G029600.3	Wheat	nucleus	43.6	42.4
Os03t0648300-01	Rice	cytosol	44.08	42.27
HORVU5Hr1G092660.2	Barley	nucleus	43.84	42.24
TraesCS5D01G382500.1	Wheat	nucleus	43.6	42.01
TraesCS5B01G028200.1	Wheat	nucleus	44.08	41.99
EER91163	Sorghum	cytosol	41.94	41.94
TraesCS5A01G373000.1	Wheat	nucleus	43.13	41.74
Zm00001d033211_P002	Maize	cytosol	41.71	41.03
CDY24282	Canola	mitochondrion	29.62	40.98
Zm00001d031098_P004	Maize	cytosol	45.26	37.82
Zm00001d013112_P011	Maize	mitochondrion	44.55	37.3
KRH21320	Soybean	cytosol	23.93	33.78
KRH15576	Soybean	cytosol	33.18	33.57
KRH32840	Soybean	mitochondrion, nucleus	10.43	33.33
KRH10977	Soybean	cytosol	24.17	33.12
KRH05433	Soybean	cytosol	32.23	32.93
KRH50151	Soybean	cytosol	22.51	32.76
KRH61522	Soybean	cytosol	34.36	32.22
KRH27315	Soybean	cytosol	22.04	31.63
KRH52206	Soybean	cytosol	33.41	31.33
KRH20344	Soybean	cytosol	22.04	31.31
KRH55128	Soybean	mitochondrion, nucleus	21.56	30.74
KRH23285	Soybean	nucleus	28.91	29.61
KRH10035	Soybean	cytosol	29.15	29.57
KRH44124	Soybean	mitochondrion	28.2	28.27
KRG95941	Soybean	nucleus	30.09	26.62
KRH22000	Soybean	plastid	21.56	26.53
KRH47099	Soybean	cytosol	28.91	26.46
KRH57858	Soybean	cytosol	28.2	26.21
KRH19825	Soybean	cytosol	29.15	26.17
KRH67648	Soybean	nucleus	29.38	26.0
KRH32420	Soybean	cytosol	28.91	25.74
KRH04761	Soybean	cytosol	29.38	25.67
KRH16503	Soybean	cytosol, endoplasmic reticulum, mitochondrion, nucleus	27.49	25.33
KRH64435	Soybean	nucleus	26.78	24.41
KRG91856	Soybean	cytosol	27.73	23.93
KRH53505	Soybean	cytosol	25.12	23.77
KRH34906	Soybean	cytosol	27.01	23.6
KRH37691	Soybean	mitochondrion	9.72	22.65
KRH47821	Soybean	nucleus	28.91	22.34
KRH06386	Soybean	mitochondrion, nucleus	28.91	22.18
KRH71267	Soybean	cytosol	23.93	18.88
KRH50198	Soybean	cytosol	23.7	18.76

Protein Annotations

EMBL:ACUP02007744	EnsemblPlants:KRH26707	EnsemblPlantsGene:GLYMA_12G189900	EntrezGene:100781346	Gene3D:1.20.5.190	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR32295	PANTHER:PTHR32295:SF90
PFAM:PF00612	PFscan:PS50096	ProteinID:KRH26707	ProteinID:KRH26707.1	SEG:seg	SMART:SM00015
UniParc:UPI00023D14AE	UniProt:K7LVU3	MapMan:35.1	:	:	:

Description

hypothetical protein

Coordinates

chr12:-:35156422..35161931

Molecular Weight (calculated)

46542.7 Da

IEP (calculated)

10.593

GRAVY (calculated)

-0.848

Length

422 amino acids

Sequence
(BLAST)

001: MGVSGKWIKA LVGLKKSEKP GSSEKDGNVG KFHHQRRHGV EFDNGKFPNE LDNAATPPVE YDNGHANLDA HYSSSSSQQA HDAAHNQQMR EELAAIRIQT
101: AFRGFLARRA LRALKGVVRL QALVRGHAVR KQAAITLRCM QALVRVQARV RARHVCMALE TQASQQKHQQ NLANEARVRE TEEGWCDSVG SVEEIQAKIL
201: KRQEAAAKRE RAMAYALSHQ WQAGSRQQPV SSGGFEPDKN SWGWNWLERW MAVRPWENRF VDINMKDGVT VHEDGAKDDK NGTTPQLSSA NKKPFSSNTH
301: PNLTSHGTGP TISDGCDSSS SKSAGLLESS YTQPVKLTSK AKVENTVEEV NSKPRIGSRS HSNPKERTSQ ADKQAKKRLS LPNNAGAGAG CQIVKHPVST
401: TNVIRDKPKL NGRRDANTKP VP

Best Arabidopsis Sequence Match ( AT3G22190.1 )
(BLAST)

001: MGASGRWIKA LVGFTKSDKS RSSKKDENVK VATKSRFGRK NSVDFDFEKF QDGFEDSNTR SMVDTGVSTS TSLQSYGGVA YDEQSRENRA ATRIQTAYRG
101: FLARRALRAL KGLVRLQALV RGHAVRKQAA VTLRCMQALV RVQARVRARR VRLALELESE TSQQTLQQQL ADEARVREIE EGWCDSIGSV EQIQAKLLKR
201: QEAAAKRERA MAYALTHQWQ AGTRLLSAHS GFQPDKNNWG WNWLERWMAV RPWENRFLDS NLRDDAKLGE NGMEQSENVP KTQIKSVSKM PNTSNLVSGV
301: SSQMTGPCQS DGDSSSPGIS SSIPVVSKAK SKPAKDDLAV EVNSRPGAGP RSHSNPKERS REPNRSSKER LSLPNSGKSL GSQSTKANRA GKLTPASQKV
401: VEEKSAQNQR RRNSDPIKQR LA

Arabidopsis Description

IQD5IQD5 [Source:UniProtKB/TrEMBL;Acc:A0A178VHN2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.