CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
plastid 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH15576	Soybean	cytosol	92.98	92.09
KRH61522	Soybean	cytosol	76.27	70.0
KRH52206	Soybean	cytosol	74.58	68.44
VIT_04s0008g01080.t01	Wine grape	nucleus	69.73	64.14
Solyc08g062940.2.1	Tomato	cytosol	45.04	60.19
PGSC0003DMT400021183	Potato	cytosol	63.2	60.14
AT2G26180.1	Thale cress	cytosol	58.11	57.69
CDX77034	Canola	cytosol	53.51	55.81
Bra034294.1-P	Field mustard	nucleus	53.51	55.67
CDY35313	Canola	nucleus	53.51	55.67
GSMUA_Achr6P04930_001	Banana	cytosol	50.61	51.48
GSMUA_Achr2P16650_001	Banana	nucleus	50.36	49.06
TraesCS3B01G124000.1	Wheat	cytosol	51.09	48.62
TraesCS3D01G107700.1	Wheat	cytosol	51.09	48.51
GSMUA_Achr10P...	Banana	cytosol	49.39	48.23
TraesCS3A01G105600.1	Wheat	cytosol, nucleus, peroxisome	50.85	47.95
Os01t0194200-01	Rice	cytosol	51.09	47.74
OQU86150	Sorghum	cytosol	50.61	47.07
Zm00001d039471_P001	Maize	cytosol	50.36	46.22
GSMUA_Achr7P09640_001	Banana	endoplasmic reticulum	45.76	45.87
GSMUA_Achr2P15730_001	Banana	cytosol	48.43	45.35
KRH10035	Soybean	cytosol	45.28	44.95
KRH23285	Soybean	nucleus	44.79	44.9
KRH44124	Soybean	mitochondrion	43.1	42.28
HORVU3Hr1G019240.2	Barley	mitochondrion, peroxisome	50.36	42.02
KRH47099	Soybean	cytosol	43.58	39.05
KRH22612	Soybean	cytosol	34.87	33.88
KRH39086	Soybean	cytosol	34.62	32.95
KRH26707	Soybean	cytosol	32.93	32.23
KRH21320	Soybean	cytosol	21.07	29.1
KRH50151	Soybean	cytosol	20.34	28.97
KRH32840	Soybean	mitochondrion, nucleus	9.2	28.79
KRH10977	Soybean	cytosol	21.31	28.57
KRH20344	Soybean	cytosol	19.85	27.61
KRH27315	Soybean	cytosol	19.61	27.55
KRH55128	Soybean	mitochondrion, nucleus	18.89	26.35
KRH19825	Soybean	cytosol	29.54	25.96
KRG95941	Soybean	nucleus	29.78	25.79
KRH57858	Soybean	cytosol	28.09	25.55
KRH67648	Soybean	nucleus	29.3	25.37
KRH32420	Soybean	cytosol	28.81	25.11
KRH04761	Soybean	cytosol	29.06	24.84
KRH53505	Soybean	cytosol	26.39	24.44
KRH16503	Soybean	cytosol, endoplasmic reticulum, mitochondrion, nucleus	26.88	24.24
KRH34906	Soybean	cytosol	28.33	24.22
KRH64435	Soybean	nucleus	26.88	23.97
KRG91856	Soybean	cytosol	27.84	23.52
KRH22000	Soybean	plastid	19.37	23.32
KRH06386	Soybean	mitochondrion, nucleus	27.36	20.55
KRH37691	Soybean	mitochondrion	8.96	20.44
KRH47821	Soybean	nucleus	26.88	20.33
KRH71267	Soybean	cytosol	22.52	17.38
KRH50198	Soybean	cytosol	22.03	17.07

Protein Annotations

EMBL:ACUP02010745	EnsemblPlants:KRH05433	EnsemblPlantsGene:GLYMA_17G227400	EntrezGene:100805149	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR32295	PANTHER:PTHR32295:SF86	PFAM:PF00612
PFscan:PS50096	ProteinID:KRH05433	ProteinID:KRH05433.1	SEG:seg	SMART:SM00015	UniParc:UPI000233E37D
UniProt:K7MNF2	MapMan:35.1	:	:	:	:

Description

hypothetical protein

Coordinates

chr17:+:38208471..38211994

Molecular Weight (calculated)

46730.5 Da

IEP (calculated)

11.035

GRAVY (calculated)

-0.797

Length

413 amino acids

Sequence
(BLAST)

001: MGASGKWVKA LIGLNNKSDL GGKKKKWRLW KSSSAGENRS QGNDYASSVA SDSFNFAVAT VVRAPPKDFK LLKQEWAATQ IQTAFRAFLA RRALRALKGV
101: VRLQALVRGR LVRKQAAVTL RCMQALVRVQ ARVRARRVRM SIEGQAVQIM LNERRTKAEL IKQAEEGWCD SKGSLKDVKT KLQMRQEGAF KRERAIAYSL
201: AHKQWRSTPI SNSRANAALN NHEMDKANWG WSWLERWMAA KPWESRLMEQ THHADATEKT PPPPPPKKCV DSSNSKTSEL CNIKIRKNNV STRISARPPH
301: IGQATRLSSS PSSEFHYDES CSNSSSICTS TTPIPCDRTE DSNNSRPSYM NLTESTKAKQ KTSNHQYNRS QRQQSMDEFQ FLKRTAVFSN ASDPSTNFSR
401: PLYLPTYMDK SSR

Best Arabidopsis Sequence Match ( AT2G26180.1 )
(BLAST)

001: MGASGKWVKS IIGLKKLEKD EIEKGNGKNK KWKLWRTTSV DSWKGFRGKH RSDSDGVDSS TVYSAAVATV LRAPPKDFKA VREEWAAIRI QTAFRGFLAR
101: RALRALKGIV RLQALVRGRQ VRKQAAVTLR CMQALVRVQA RVRARRVRMT VEGQAVQKLL DEHRTKSDLL KEVEEGWCDR KGTVDDIKSK LQQRQEGAFK
201: RERALAYALA QKQWRSTTSS NLKTNSSISY LKSQEFDKNS WGWSWLERWM AARPWETRLM DTVDTAATPP PLPHKHLKSP ETADVVQVRR NNVTTRVSAK
301: PPPHMLSSSP GYEFNESSGS SSICTSTTPV SGKTGLVSDN SSSQAKKHKP SYMSLTESTK AKRRTNRGLR QSMDEFQFMK NSGMFTGELK TSPSSDPFVS
401: FSKPLGVPTR FEKPRG

Arabidopsis Description

IQD6At2g26180 [Source:UniProtKB/TrEMBL;Acc:O64852]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.