Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU86150 | Sorghum | cytosol | 92.67 | 93.92 |
| Os01t0194200-01 | Rice | cytosol | 83.11 | 84.62 |
| TraesCS3D01G107700.1 | Wheat | cytosol | 80.44 | 83.22 |
| TraesCS3B01G124000.1 | Wheat | cytosol | 80.22 | 83.18 |
| TraesCS3A01G105600.1 | Wheat | cytosol, nucleus, peroxisome | 78.89 | 81.05 |
| HORVU3Hr1G019240.2 | Barley | mitochondrion, peroxisome | 78.22 | 71.11 |
| GSMUA_Achr6P04930_001 | Banana | cytosol | 55.33 | 61.33 |
| Solyc08g062940.2.1 | Tomato | cytosol | 42.0 | 61.16 |
| GSMUA_Achr2P16650_001 | Banana | nucleus | 56.89 | 60.38 |
| GSMUA_Achr7P09640_001 | Banana | endoplasmic reticulum | 53.33 | 58.25 |
| VIT_04s0008g01080.t01 | Wine grape | nucleus | 56.0 | 56.12 |
| GSMUA_Achr10P... | Banana | cytosol | 52.44 | 55.79 |
| KRH61522 | Soybean | cytosol | 53.33 | 53.33 |
| PGSC0003DMT400021183 | Potato | cytosol | 51.33 | 53.23 |
| Bra034294.1-P | Field mustard | nucleus | 46.22 | 52.39 |
| CDY35313 | Canola | nucleus | 46.22 | 52.39 |
| AT2G26180.1 | Thale cress | cytosol | 48.22 | 52.16 |
| CDX77034 | Canola | cytosol | 45.78 | 52.02 |
| KRH15576 | Soybean | cytosol | 47.56 | 51.32 |
| KRH52206 | Soybean | cytosol | 50.44 | 50.44 |
| KRH05433 | Soybean | cytosol | 46.22 | 50.36 |
| GSMUA_Achr2P15730_001 | Banana | cytosol | 47.56 | 48.53 |
| Zm00001d038861_P001 | Maize | cytosol, plastid | 38.67 | 40.56 |
| Zm00001d043691_P001 | Maize | mitochondrion | 39.33 | 40.32 |
| Zm00001d034366_P003 | Maize | mitochondrion | 29.33 | 29.53 |
| Zm00001d031098_P004 | Maize | cytosol | 30.67 | 27.33 |
| Zm00001d033211_P002 | Maize | cytosol | 25.78 | 27.04 |
| Zm00001d045305_P001 | Maize | nucleus | 19.78 | 26.57 |
| Zm00001d035492_P009 | Maize | cytosol | 27.56 | 26.05 |
| Zm00001d013112_P011 | Maize | mitochondrion | 28.89 | 25.79 |
| Zm00001d010975_P003 | Maize | cytosol | 27.33 | 25.73 |
| Zm00001d042973_P007 | Maize | cytosol | 28.44 | 25.25 |
| Zm00001d049684_P002 | Maize | cytosol, mitochondrion | 26.22 | 21.69 |
| Zm00001d009320_P001 | Maize | nucleus | 9.33 | 18.18 |
| Zm00001d012167_P001 | Maize | cytosol | 21.78 | 16.95 |
| Zm00001d038395_P005 | Maize | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 20.22 | 14.0 |
Protein Annotations
| EnsemblPlants:Zm00001d039471_P001 | EnsemblPlants:Zm00001d039471_T001 | EnsemblPlantsGene:Zm00001d039471 | EntrezGene:100285104 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | InterPro:DUF4005 |
| InterPro:IPR000048 | InterPro:IQ_motif_EF-hand-BS | PANTHER:PTHR32295 | PANTHER:PTHR32295:SF88 | PFAM:PF13178 | PFscan:PS50096 |
| ProteinID:ONM28911.1 | SEG:seg | UniParc:UPI0004DEA8FE | UniProt:A0A1D6MHJ4 | MapMan:35.2 | : |
Description
GRMZM2G077227IQ-domain 6
Coordinates
chr3:+:5157787..5160649
Molecular Weight (calculated)
49694.3 Da
IEP (calculated)
11.019
GRAVY (calculated)
-0.638
Length
450 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGSGKWVKS LIGLKKQPEK EDCKMSNVSV PAQDKLQLPS VHGGGLRGKG RRWKLWRTSS GDQGSMWRGS RGGSQRSAAS EASDDASSVA AVPADPFTAA
101: VATVARAPAR DFMAVRQEWA AIRVQTAFRG FLARRALRAL KGLVRLQAIV RGRQVRKQAA VTLRCMQALV RVQARIRARR VRMSTEGQAV QKLLEARRTQ
201: MDILREAEEG WCDSQGTLEQ VRVKLQKRQE GAIKRERAIA YAYSQQADGA AKCNPPKLTS NGLVNHSGML LKHQNLDKGN GNWSWLERWM AARPWENRLM
301: EEHNSSSPDF RSSKNCEDSF GVLGDFSEPN SVKVRKNNVS KRVCAKPPGP THAHGHHQRL KAQSISSLST ELHNDESSAS SSSCFASTPI SFTLVASEKT
401: EDSVRTRPNY MSMTESIKAK QKACSAQRTV ALKQCDDRKA MSAELKVAQV
101: VATVARAPAR DFMAVRQEWA AIRVQTAFRG FLARRALRAL KGLVRLQAIV RGRQVRKQAA VTLRCMQALV RVQARIRARR VRMSTEGQAV QKLLEARRTQ
201: MDILREAEEG WCDSQGTLEQ VRVKLQKRQE GAIKRERAIA YAYSQQADGA AKCNPPKLTS NGLVNHSGML LKHQNLDKGN GNWSWLERWM AARPWENRLM
301: EEHNSSSPDF RSSKNCEDSF GVLGDFSEPN SVKVRKNNVS KRVCAKPPGP THAHGHHQRL KAQSISSLST ELHNDESSAS SSSCFASTPI SFTLVASEKT
401: EDSVRTRPNY MSMTESIKAK QKACSAQRTV ALKQCDDRKA MSAELKVAQV
001: MGASGKWVKS IIGLKKLEKD EIEKGNGKNK KWKLWRTTSV DSWKGFRGKH RSDSDGVDSS TVYSAAVATV LRAPPKDFKA VREEWAAIRI QTAFRGFLAR
101: RALRALKGIV RLQALVRGRQ VRKQAAVTLR CMQALVRVQA RVRARRVRMT VEGQAVQKLL DEHRTKSDLL KEVEEGWCDR KGTVDDIKSK LQQRQEGAFK
201: RERALAYALA QKQWRSTTSS NLKTNSSISY LKSQEFDKNS WGWSWLERWM AARPWETRLM DTVDTAATPP PLPHKHLKSP ETADVVQVRR NNVTTRVSAK
301: PPPHMLSSSP GYEFNESSGS SSICTSTTPV SGKTGLVSDN SSSQAKKHKP SYMSLTESTK AKRRTNRGLR QSMDEFQFMK NSGMFTGELK TSPSSDPFVS
401: FSKPLGVPTR FEKPRG
101: RALRALKGIV RLQALVRGRQ VRKQAAVTLR CMQALVRVQA RVRARRVRMT VEGQAVQKLL DEHRTKSDLL KEVEEGWCDR KGTVDDIKSK LQQRQEGAFK
201: RERALAYALA QKQWRSTTSS NLKTNSSISY LKSQEFDKNS WGWSWLERWM AARPWETRLM DTVDTAATPP PLPHKHLKSP ETADVVQVRR NNVTTRVSAK
301: PPPHMLSSSP GYEFNESSGS SSICTSTTPV SGKTGLVSDN SSSQAKKHKP SYMSLTESTK AKRRTNRGLR QSMDEFQFMK NSGMFTGELK TSPSSDPFVS
401: FSKPLGVPTR FEKPRG
Arabidopsis Description
IQD6At2g26180 [Source:UniProtKB/TrEMBL;Acc:O64852]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.