Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER91163 | Sorghum | cytosol | 89.04 | 90.52 |
| Os03t0648300-01 | Rice | cytosol | 70.4 | 68.64 |
| TraesCS5B01G375000.1 | Wheat | nucleus | 67.83 | 66.74 |
| TraesCS5A01G373000.1 | Wheat | nucleus | 67.13 | 66.06 |
| HORVU5Hr1G092660.2 | Barley | nucleus | 67.37 | 65.98 |
| TraesCS5D01G382500.1 | Wheat | nucleus | 66.9 | 65.53 |
| Zm00001d031098_P004 | Maize | cytosol | 53.38 | 45.35 |
| GSMUA_Achr4P31410_001 | Banana | cytosol | 44.52 | 43.41 |
| Bra031331.1-P | Field mustard | cytosol | 38.46 | 42.97 |
| CDY37387 | Canola | cytosol | 38.23 | 42.71 |
| GSMUA_Achr4P22800_001 | Banana | cytosol | 42.42 | 41.94 |
| KRH26707 | Soybean | cytosol | 41.03 | 41.71 |
| GSMUA_Achr5P02600_001 | Banana | cytosol | 42.19 | 41.23 |
| KRH22612 | Soybean | cytosol | 40.79 | 41.18 |
| CDY24286 | Canola | cytosol | 38.69 | 41.09 |
| CDX92933 | Canola | cytosol, plastid | 38.23 | 40.9 |
| CDY10618 | Canola | cytosol | 38.69 | 40.89 |
| AT3G22190.2 | Thale cress | cytosol | 39.39 | 40.05 |
| VIT_06s0009g00210.t01 | Wine grape | cytosol | 41.26 | 39.78 |
| KRH39086 | Soybean | cytosol | 39.63 | 39.17 |
| CDY39505 | Canola | cytosol | 34.5 | 37.47 |
| Solyc11g071840.1.1 | Tomato | cytosol | 38.93 | 37.28 |
| Zm00001d034366_P003 | Maize | mitochondrion | 38.0 | 36.47 |
| Bra001855.1-P | Field mustard | cytosol | 28.67 | 35.86 |
| CDX92931 | Canola | mitochondrion, nucleus | 21.21 | 35.69 |
| CDY58749 | Canola | cytosol | 37.76 | 35.53 |
| Bra023846.1-P | Field mustard | cytosol | 34.27 | 35.25 |
| Zm00001d013112_P011 | Maize | mitochondrion | 35.9 | 30.56 |
| CDY24282 | Canola | mitochondrion | 21.21 | 29.84 |
| Zm00001d039471_P001 | Maize | cytosol | 27.04 | 25.78 |
| Zm00001d045305_P001 | Maize | nucleus | 20.05 | 25.67 |
| Zm00001d043691_P001 | Maize | mitochondrion | 24.71 | 24.15 |
| Zm00001d038861_P001 | Maize | cytosol, plastid | 22.38 | 22.38 |
| Zm00001d035492_P009 | Maize | cytosol | 23.31 | 21.01 |
| Zm00001d010975_P003 | Maize | cytosol | 23.31 | 20.92 |
| Zm00001d042973_P007 | Maize | cytosol | 23.78 | 20.12 |
| Zm00001d009320_P001 | Maize | nucleus | 10.02 | 18.61 |
| Zm00001d049684_P002 | Maize | cytosol, mitochondrion | 22.14 | 17.46 |
| Zm00001d012167_P001 | Maize | cytosol | 17.95 | 13.32 |
| Zm00001d038395_P005 | Maize | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 19.35 | 12.77 |
Protein Annotations
| EMBL:EU960154 | EMBL:KJ728238 | EnsemblPlants:Zm00001d033211_P002 | EnsemblPlants:Zm00001d033211_T002 | EnsemblPlantsGene:Zm00001d033211 | EntrezGene:100193243 |
| Gene3D:1.20.5.190 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR000048 | InterPro:IQ_motif_EF-hand-BS |
| PANTHER:PTHR32295 | PANTHER:PTHR32295:SF31 | PFAM:PF00612 | PFscan:PS50096 | ProteinID:ONM06977.1 | SEG:seg |
| SMART:SM00015 | UniParc:UPI000182CAC0 | UniProt:B6T589 | MapMan:35.2 | : | : |
Description
Calmodulin binding protein
Coordinates
chr1:+:254286994..254302867
Molecular Weight (calculated)
47293.6 Da
IEP (calculated)
10.383
GRAVY (calculated)
-0.817
Length
429 amino acids
Sequence
(BLAST)
(BLAST)
001: MGISSKWIKS LVGIRKQEKA QNAEKQEKGW NAESSETKSS ANQSLHKRKH SLDPGAALAV EEITVQSEAL TDNKSAQMVS NSFFSDSTPL DVHISQAEHH
101: SNEDLAATVV QSAFRAFLAR RALRALKGIV LLQALIRGHS VRRQTAETLQ CMQALVKAKA RVRARQVRVA LENQVARKKI PEQDDHENHV REVEGGWCGS
201: IGSMEEMQAK ALKRREAAAK RERAMAYALT HQRQAGSKQQ NSLSLQGLEL GENHWESNWL DRWMAVRPWE NRLLDCNAKE SLPTHEDKDE EANSQITPKG
301: KVSTSNTPGL SKKKGVNHKK SYSDVSCTSF ARPANVLPST SLGSSKQKAK AVGEVFEEVS SQPTDIGSKD VHNSKDKLVQ VNGPAKKRLS LPNNVGRESG
401: KGPTRRNSLN RSAPKARADS PNQGDELEA
101: SNEDLAATVV QSAFRAFLAR RALRALKGIV LLQALIRGHS VRRQTAETLQ CMQALVKAKA RVRARQVRVA LENQVARKKI PEQDDHENHV REVEGGWCGS
201: IGSMEEMQAK ALKRREAAAK RERAMAYALT HQRQAGSKQQ NSLSLQGLEL GENHWESNWL DRWMAVRPWE NRLLDCNAKE SLPTHEDKDE EANSQITPKG
301: KVSTSNTPGL SKKKGVNHKK SYSDVSCTSF ARPANVLPST SLGSSKQKAK AVGEVFEEVS SQPTDIGSKD VHNSKDKLVQ VNGPAKKRLS LPNNVGRESG
401: KGPTRRNSLN RSAPKARADS PNQGDELEA
001: MGASGKWVKS IIGLKKLEKD EIEKGNGKNK KWKLWRTTSV DSWKGFRGKH RSDSDGVDSS TVYSAAVATV LRAPPKDFKA VREEWAAIRI QTAFRGFLAR
101: RALRALKGIV RLQALVRGRQ VRKQAAVTLR CMQALVRVQA RVRARRVRMT VEGQAVQKLL DEHRTKSDLL KEVEEGWCDR KGTVDDIKSK LQQRQEGAFK
201: RERALAYALA QKQWRSTTSS NLKTNSSISY LKSQEFDKNS WGWSWLERWM AARPWETRLM DTVDTAATPP PLPHKHLKSP ETADVVQVRR NNVTTRVSAK
301: PPPHMLSSSP GYEFNESSGS SSICTSTTPV SGKTGLVSDN SSSQAKKHKP SYMSLTESTK AKRRTNRGLR QSMDEFQFMK NSGMFTGELK TSPSSDPFVS
401: FSKPLGVPTR FEKPRG
101: RALRALKGIV RLQALVRGRQ VRKQAAVTLR CMQALVRVQA RVRARRVRMT VEGQAVQKLL DEHRTKSDLL KEVEEGWCDR KGTVDDIKSK LQQRQEGAFK
201: RERALAYALA QKQWRSTTSS NLKTNSSISY LKSQEFDKNS WGWSWLERWM AARPWETRLM DTVDTAATPP PLPHKHLKSP ETADVVQVRR NNVTTRVSAK
301: PPPHMLSSSP GYEFNESSGS SSICTSTTPV SGKTGLVSDN SSSQAKKHKP SYMSLTESTK AKRRTNRGLR QSMDEFQFMK NSGMFTGELK TSPSSDPFVS
401: FSKPLGVPTR FEKPRG
Arabidopsis Description
IQD6At2g26180 [Source:UniProtKB/TrEMBL;Acc:O64852]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.