Factsheet for Zm00001d012167_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 3
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES01898	Sorghum	cytosol	87.2	89.52
Os01t0896200-01	Rice	mitochondrion	41.52	71.22
TraesCS3D01G392900.1	Wheat	cytosol	66.61	61.9
TraesCS3B01G431200.1	Wheat	cytosol	65.92	60.86
TraesCS3A01G398900.1	Wheat	cytosol	65.57	60.83
HORVU3Hr1G089690.1	Barley	cytosol	65.92	60.67
GSMUA_Achr8P32220_001	Banana	cytosol	36.33	48.05
GSMUA_Achr7P02870_001	Banana	mitochondrion	23.88	45.85
KRH50198	Soybean	cytosol	34.43	37.34
CDY30433	Canola	cytosol	29.07	37.33
CDY23391	Canola	cytosol	29.76	37.31
KRH71267	Soybean	cytosol	34.43	37.2
CDY05984	Canola	nucleus	31.83	37.17
Bra007471.1-P	Field mustard	nucleus	31.83	37.1
CDX71881	Canola	nucleus	31.66	37.04
VIT_05s0094g00530.t01	Wine grape	cytosol	36.68	35.45
AT3G59690.2	Thale cress	nucleus	31.49	35.2
Solyc08g014280.2.1	Tomato	cytosol	32.35	34.69
PGSC0003DMT400041427	Potato	cytosol	31.83	34.39
Bra037689.1-P	Field mustard	cytosol	29.24	32.07
CDX83468	Canola	plasma membrane	29.07	30.49
CDX79809	Canola	nucleus	30.97	29.93
CDY44247	Canola	nucleus	28.72	29.86
Bra000318.1-P	Field mustard	nucleus	30.45	29.58
CDY66694	Canola	nucleus	30.62	29.55
Solyc06g053450.2.1	Tomato	nucleus	29.41	28.72
Bra004776.1-P	Field mustard	nucleus	30.8	28.48
PGSC0003DMT400042121	Potato	cytosol, mitochondrion	29.58	27.71
Zm00001d010975_P003	Maize	cytosol	22.49	27.2
Zm00001d035492_P009	Maize	cytosol	22.32	27.1
AT2G43680.1	Thale cress	nucleus	30.8	26.61
Zm00001d042973_P007	Maize	cytosol	21.63	24.65
Zm00001d049684_P002	Maize	cytosol, mitochondrion	21.45	22.79
Zm00001d039471_P001	Maize	cytosol	16.95	21.78
Zm00001d043691_P001	Maize	mitochondrion	15.57	20.5
Zm00001d045305_P001	Maize	nucleus	11.76	20.3
Zm00001d038861_P001	Maize	cytosol, plastid	14.88	20.05
Zm00001d034366_P003	Maize	mitochondrion	14.19	18.34
Zm00001d033211_P002	Maize	cytosol	13.32	17.95
Zm00001d031098_P004	Maize	cytosol	14.71	16.83
Zm00001d013112_P011	Maize	mitochondrion	14.01	16.07
Zm00001d009320_P001	Maize	nucleus	6.4	16.02
Zm00001d038395_P005	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	17.65	15.69

Protein Annotations

EnsemblPlants:Zm00001d012167_P001	EnsemblPlants:Zm00001d012167_T001	EnsemblPlantsGene:Zm00001d012167	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR32295	PANTHER:PTHR32295:SF18	PFscan:PS50096	ProteinID:AQK99022.1
SEG:seg	UniParc:UPI00084526EE	UniProt:A0A1D6G787	MapMan:20.6.2	:	:

Description

SF16 protein

Coordinates

chr8:-:169382734..169386405

Molecular Weight (calculated)

63818.3 Da

IEP (calculated)

12.010

GRAVY (calculated)

-0.656

Length

578 amino acids

Sequence
(BLAST)

001: MGKKGNWFTA LKKAFTSSPK EKPTNVHQLV AQYPSTHAHG WEKKRWGGFG RSRPHAEPAS PAAGALINIP LYREPSSIEK ILGDAEMDQQ RQYYAATRAQ
101: YQITPARPTT AVAGSAASAA AVPLPQPVVG VGTARERERR REDKPAAVVL PLPPPSPPPL IRRFDHDREQ QKKLQLQPQS CRAETEWRRQ QQQPRRHRAA
201: RQSAAPPDRA RAAAVAIQAA FRGYMASPSR RLALLFAFAR VDAARRNYRS LRGLIRLQGV MRGASVRRQT AQAMRCMQTL VRVQAQVRAS RVEAMERRNR
301: QHHGAMLRDG GRWRASSQDG GFWDASRLTR EEADARTKRK VEAVIKRERA LAYAYSHQLL KATPMAAHAI LADLQSGRSP WWWTPIERRH EPGAYRPADP
401: AIRKPLPALA IAHRDMTTTP VAMTAATTPA RSVVSAYSKT RATRPVIRVG APPPSNHSHV GSIRDDESLT SCPAFGGVPN YMTPTMSASA KARARAHLQE
501: QQKNKAAQEK PRFSFGLGQS IGSWAKSPFW KAAVPSSRVA TPAASMAGGR HRSTRSISGL STDSTVSMPA RLGTRSFK

Best Arabidopsis Sequence Match ( AT3G59690.1 )
(BLAST)

001: MGKKGSWFSA IKRVFTPHSK EKQLSNNNQE PEIKSENKEK KKKGFGKKLR NGETNSFLPI FRQPSSIEKI LSEAEREHNL VFRPPTPTDR ANSSSTSVAS
101: PLVRPASPKV PSQRYVSSPK PISPRVAYPQ VHYPKPPSPK PPSPRAVSPR IVQRREFVHR PEPSLLVKNA YAIKIQAAFR GYMARRSFRA LKGLVRLQGV
201: VRGHSVKRQT MNAMKYMQLL VRVQTQVQSR RIQMLENRAR NDKDDTKLVS SRMSDDWDDS VLTKEEKDVR LHRKIDAMIK RERSMAYAYS HQLWKNSPKS
301: AQDIRTSGFP LWWNWVDRQK NQNQPFRLTP TRPSLSPQPQ SSNQNHFRLN NSFDTSTPNS SKSTFVTPSR PIHTPQPYSS SVSRYSRGGG RATQDSPFKD
401: DDSLTSCPPF SAPSYMAPTV SAKAKLRANS NPKERMDRTP VSTNEKRRSS FPLGSFKWNK GSLFMSNNSN NKGPGSSSSG AVVLEKHKTL KSVGNLSIDS
501: TVSMPATIGR RAFNRFA

Arabidopsis Description

IQD13IQ-domain 13 [Source:UniProtKB/TrEMBL;Acc:Q9M199]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.