Factsheet for GSMUA_Achr8P32220_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
plastid 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P02870_001	Banana	mitochondrion	51.03	74.09
Os01t0896200-01	Rice	mitochondrion	33.18	43.03
KRH50198	Soybean	cytosol	46.91	38.46
KRH71267	Soybean	cytosol	46.45	37.94
EES01898	Sorghum	cytosol	48.51	37.66
CDX71881	Canola	nucleus	41.65	36.84
CDY05984	Canola	nucleus	41.65	36.77
Bra007471.1-P	Field mustard	nucleus	41.42	36.49
Zm00001d012167_P001	Maize	cytosol	48.05	36.33
Solyc08g014280.2.1	Tomato	cytosol	44.62	36.18
VIT_05s0094g00530.t01	Wine grape	cytosol	48.74	35.62
PGSC0003DMT400041427	Potato	cytosol	43.48	35.51
CDY23391	Canola	cytosol	37.07	35.14
CDY30433	Canola	cytosol	36.16	35.11
AT3G59690.2	Thale cress	nucleus	40.27	34.04
TraesCS3D01G392900.1	Wheat	cytosol	45.77	32.15
HORVU3Hr1G089690.1	Barley	cytosol	45.54	31.69
TraesCS3B01G431200.1	Wheat	cytosol	45.31	31.63
TraesCS3A01G398900.1	Wheat	cytosol	45.08	31.62
Bra037689.1-P	Field mustard	cytosol	36.84	30.55
Solyc06g053450.2.1	Tomato	nucleus	40.05	29.56
GSMUA_Achr10P...	Banana	nucleus	29.29	28.44
PGSC0003DMT400042121	Potato	cytosol, mitochondrion	40.05	28.36
CDX83468	Canola	plasma membrane	35.7	28.31
CDY44247	Canola	nucleus	35.93	28.24
Bra000318.1-P	Field mustard	nucleus	37.53	27.56
GSMUA_Achr3P17820_001	Banana	cytosol	29.98	27.41
CDX79809	Canola	nucleus	36.84	26.92
CDY66694	Canola	nucleus	36.61	26.71
GSMUA_AchrUn_...	Banana	mitochondrion, nucleus	27.23	25.93
Bra004776.1-P	Field mustard	nucleus	36.84	25.76
GSMUA_Achr7P18240_001	Banana	cytosol	27.69	25.64
GSMUA_Achr7P22680_001	Banana	cytosol	27.23	25.59
AT2G43680.1	Thale cress	nucleus	38.9	25.41
GSMUA_Achr10P...	Banana	cytosol	24.49	25.36
GSMUA_Achr1P18950_001	Banana	nucleus	26.32	25.11
GSMUA_AchrUn_...	Banana	mitochondrion, nucleus	25.63	24.3
GSMUA_Achr6P02050_001	Banana	cytosol	8.47	23.87
GSMUA_Achr11P...	Banana	mitochondrion	24.71	23.38
GSMUA_Achr1P16160_001	Banana	nucleus	23.34	22.77
GSMUA_Achr10P...	Banana	cytosol	22.88	22.12
GSMUA_Achr2P20050_001	Banana	nucleus	14.19	20.95
GSMUA_Achr6P04930_001	Banana	cytosol	19.22	20.69
GSMUA_Achr10P...	Banana	cytosol	19.91	20.57
GSMUA_Achr2P16650_001	Banana	nucleus	19.91	20.52
GSMUA_Achr7P09640_001	Banana	endoplasmic reticulum	19.22	20.39
GSMUA_Achr6P35280_001	Banana	endoplasmic reticulum	14.19	20.2
GSMUA_Achr2P15730_001	Banana	cytosol	18.54	18.37
GSMUA_Achr6P14440_001	Banana	nucleus	6.86	17.54
GSMUA_Achr4P31410_001	Banana	cytosol	17.62	17.5
GSMUA_Achr5P02600_001	Banana	cytosol	17.16	17.08
GSMUA_Achr4P22800_001	Banana	cytosol	16.93	17.05

Protein Annotations

EnsemblPlants:GSMUA_Achr8P32220_001	EnsemblPlants:GSMUA_Achr8T32220_001	EnsemblPlantsGene:GSMUA_Achr8G32220_001	Gene3D:1.20.5.190	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:DUF4005	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR32295	PANTHER:PTHR32295:SF18
PFAM:PF00612	PFAM:PF13178	PFscan:PS50096	SEG:seg	SMART:SM00015	UniParc:UPI000296C717
UniProt:M0TVH4	MapMan:20.6.2	:	:	:	:

Description

Putative Protein IQ-DOMAIN 14 [Source:GMGC_GENE;Acc:GSMUA_Achr8G32220_001]

Coordinates

chr8:+:33723366..33725829

Molecular Weight (calculated)

49031.6 Da

IEP (calculated)

11.273

GRAVY (calculated)

-0.801

Length

437 amino acids

Sequence
(BLAST)

001: MGKKSSWFSV IKRAFTSSSR DKFVDARGSE KKLTKEKKRW PFGKSKHGET NSFIPLQREP SSIEKILEDA ESEQQQQDGV HSRPSKKVQQ SIPAARKQTM
101: IPNYAHISAI KIQAAYRGHQ ARRSYHTLKG LMRLQRAMRG QNVKRQTMNT MRCMQMLVRV QLQIRANRLQ MMESRSLQLH KTSPKCEKDT ESTFGKWSAA
201: HQTEEEGREE WDDSVLTRDA LEARMRNKVE AVIKRERALA YAYTHQLLKV TPRSAEAMLT GLRSGSAPWW WTWLESQHPS SDNPEPAPPV RAPRPQTPRS
301: PAAIRPRATP GPRRPHRGHY TRLRPADADD ASLTSCPTFA VPNYMAPTAS AKAKVRNDRA FVSVQEPKKK RFSFGLGQSI GSLFAGKETI SGGGCCGSKS
401: TGRQGRHRST QSVGGMSVDS IVSLPVGAVV GRRSSFI

Best Arabidopsis Sequence Match ( AT3G59690.1 )
(BLAST)

001: MGKKGSWFSA IKRVFTPHSK EKQLSNNNQE PEIKSENKEK KKKGFGKKLR NGETNSFLPI FRQPSSIEKI LSEAEREHNL VFRPPTPTDR ANSSSTSVAS
101: PLVRPASPKV PSQRYVSSPK PISPRVAYPQ VHYPKPPSPK PPSPRAVSPR IVQRREFVHR PEPSLLVKNA YAIKIQAAFR GYMARRSFRA LKGLVRLQGV
201: VRGHSVKRQT MNAMKYMQLL VRVQTQVQSR RIQMLENRAR NDKDDTKLVS SRMSDDWDDS VLTKEEKDVR LHRKIDAMIK RERSMAYAYS HQLWKNSPKS
301: AQDIRTSGFP LWWNWVDRQK NQNQPFRLTP TRPSLSPQPQ SSNQNHFRLN NSFDTSTPNS SKSTFVTPSR PIHTPQPYSS SVSRYSRGGG RATQDSPFKD
401: DDSLTSCPPF SAPSYMAPTV SAKAKLRANS NPKERMDRTP VSTNEKRRSS FPLGSFKWNK GSLFMSNNSN NKGPGSSSSG AVVLEKHKTL KSVGNLSIDS
501: TVSMPATIGR RAFNRFA

Arabidopsis Description

IQD13IQ-domain 13 [Source:UniProtKB/TrEMBL;Acc:Q9M199]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.