Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr2P20050_001 | Banana | nucleus | 66.67 | 38.51 |
| Zm00001d009320_P001 | Maize | nucleus | 38.01 | 28.14 |
| CDY20099 | Canola | cytosol | 42.69 | 27.65 |
| CDY32322 | Canola | cytosol, plastid | 41.52 | 27.41 |
| AT3G15050.1 | Thale cress | plastid | 41.52 | 27.41 |
| Bra021588.1-P | Field mustard | cytosol, plastid | 42.11 | 27.27 |
| VIT_19s0014g01690.t01 | Wine grape | cytosol | 48.54 | 26.86 |
| Solyc12g014130.1.1 | Tomato | nucleus | 39.18 | 25.67 |
| EER87873 | Sorghum | nucleus | 48.54 | 24.92 |
| Zm00001d045305_P001 | Maize | nucleus | 47.95 | 24.48 |
| PGSC0003DMT400039646 | Potato | mitochondrion | 40.94 | 23.65 |
| TraesCS7D01G107600.2 | Wheat | nucleus | 45.03 | 23.55 |
| TraesCS7A01G112000.1 | Wheat | nucleus | 45.03 | 23.55 |
| HORVU7Hr1G023980.1 | Barley | nucleus | 44.44 | 23.24 |
| Os06t0155300-01 | Rice | plasma membrane | 47.95 | 23.23 |
| KRH55128 | Soybean | mitochondrion, nucleus | 39.77 | 22.97 |
| TraesCS7B01G010100.1 | Wheat | nucleus | 43.86 | 22.94 |
| KRH27315 | Soybean | cytosol | 37.43 | 21.77 |
| KRH22000 | Soybean | plastid | 38.01 | 18.95 |
| HORVU7Hr1G024060.1 | Barley | plastid | 16.96 | 16.48 |
| GSMUA_Achr7P02870_001 | Banana | mitochondrion | 21.64 | 12.29 |
| GSMUA_Achr6P35280_001 | Banana | endoplasmic reticulum | 21.64 | 12.05 |
| GSMUA_Achr7P22680_001 | Banana | cytosol | 29.24 | 10.75 |
| GSMUA_Achr10P... | Banana | cytosol | 25.73 | 10.43 |
| GSMUA_Achr2P16650_001 | Banana | nucleus | 25.73 | 10.38 |
| GSMUA_Achr3P17820_001 | Banana | cytosol | 28.66 | 10.25 |
| GSMUA_Achr10P... | Banana | nucleus | 26.9 | 10.22 |
| GSMUA_Achr6P04930_001 | Banana | cytosol | 23.98 | 10.1 |
| GSMUA_AchrUn_... | Banana | mitochondrion, nucleus | 26.32 | 9.8 |
| GSMUA_Achr4P31410_001 | Banana | cytosol | 25.15 | 9.77 |
| GSMUA_Achr4P22800_001 | Banana | cytosol | 24.56 | 9.68 |
| GSMUA_Achr5P02600_001 | Banana | cytosol | 24.56 | 9.57 |
| GSMUA_Achr7P18240_001 | Banana | cytosol | 26.32 | 9.53 |
| GSMUA_Achr7P09640_001 | Banana | endoplasmic reticulum | 22.81 | 9.47 |
| GSMUA_Achr1P18950_001 | Banana | nucleus | 25.15 | 9.39 |
| GSMUA_AchrUn_... | Banana | mitochondrion, nucleus | 24.56 | 9.11 |
| GSMUA_Achr10P... | Banana | cytosol | 22.22 | 8.98 |
| GSMUA_Achr1P16160_001 | Banana | nucleus | 22.81 | 8.71 |
| GSMUA_Achr11P... | Banana | mitochondrion | 21.05 | 7.79 |
| GSMUA_Achr10P... | Banana | cytosol | 20.47 | 7.74 |
| GSMUA_Achr8P32220_001 | Banana | cytosol | 17.54 | 6.86 |
| GSMUA_Achr2P15730_001 | Banana | cytosol | 17.54 | 6.8 |
| GSMUA_Achr6P02050_001 | Banana | cytosol | 1.75 | 1.94 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr6P14440_001 | EnsemblPlants:GSMUA_Achr6T14440_001 | EnsemblPlantsGene:GSMUA_Achr6G14440_001 | PANTHER:PTHR32295 | PANTHER:PTHR32295:SF93 | UniParc:UPI0002964303 |
| UniProt:M0T6Z2 | MapMan:35.2 | : | : | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr6G14440_001]
Coordinates
chr6:-:9568239..9568969
Molecular Weight (calculated)
19164.2 Da
IEP (calculated)
10.851
GRAVY (calculated)
-1.135
Length
171 amino acids
Sequence
(BLAST)
(BLAST)
001: MVAEGRFRQK KHDNRSKLEA KLHDLALEWN GGSETKEEIV ARIQQREEAA VKRERAMAYA FSHQWRVNSG VSQGPFVYEL AKGNWEWSWV DRWIAARPWE
101: TRPSSHSMAK TASKAGKNAS PSGQKAQGST KKPSKPSEEA AASKESNTTN VASSARPRTR STKATKQEQQ P
101: TRPSSHSMAK TASKAGKNAS PSGQKAQGST KKPSKPSEEA AASKESNTTN VASSARPRTR STKATKQEQQ P
001: MGSGWLLRSI ICLNGTKKNK SNRGNVHSET SNRVKPVESS SAASTKLTVE VAVIRIQKAF RAFKARKRLC SLKSARRFNS LIQGHTVMNQ TSTALNVIHS
101: WYDIQNQIRA RRLYMVTQGR LQHKRLENRL KLEIKLHELE VEWCGGSETM EEILAKIQQK EEATVKRERA MAYAFSHQWR ANATQYLGQA SFNLGKESWG
201: WSWKERWIAA RPWEIRAQCY VVKPIKPSKK PEKSSPNNVI TKTSAKPDEV GNSKKPGSG
101: WYDIQNQIRA RRLYMVTQGR LQHKRLENRL KLEIKLHELE VEWCGGSETM EEILAKIQQK EEATVKRERA MAYAFSHQWR ANATQYLGQA SFNLGKESWG
201: WSWKERWIAA RPWEIRAQCY VVKPIKPSKK PEKSSPNNVI TKTSAKPDEV GNSKKPGSG
Arabidopsis Description
IQD10IQ-domain 10 [Source:UniProtKB/TrEMBL;Acc:Q9LKA0]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.