Factsheet for GSMUA_Achr7P09640_001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

nucleus 2
mitochondrion 2
endoplasmic reticulum 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	cytosol	66.02	64.3
Solyc08g062940.2.1	Tomato	cytosol	41.5	55.34
TraesCS3B01G124000.1	Wheat	cytosol	58.01	55.07
GSMUA_Achr6P04930_001	Banana	cytosol	54.13	54.93
Os01t0194200-01	Rice	cytosol	58.74	54.75
TraesCS3D01G107700.1	Wheat	cytosol	57.77	54.71
OQU86150	Sorghum	cytosol	58.74	54.5
TraesCS3A01G105600.1	Wheat	cytosol, nucleus, peroxisome	57.77	54.34
GSMUA_Achr2P16650_001	Banana	nucleus	55.83	54.25
Zm00001d039471_P001	Maize	cytosol	58.25	53.33
GSMUA_Achr2P15730_001	Banana	cytosol	57.04	53.29
VIT_04s0008g01080.t01	Wine grape	nucleus	54.61	50.11
KRH61522	Soybean	cytosol	54.61	50.0
PGSC0003DMT400021183	Potato	cytosol	50.97	48.39
KRH52206	Soybean	cytosol	52.43	48.0
HORVU3Hr1G019240.2	Barley	mitochondrion, peroxisome	57.28	47.68
AT2G26180.1	Thale cress	cytosol	47.57	47.12
CDX77034	Canola	cytosol	44.42	46.21
Bra034294.1-P	Field mustard	nucleus	44.42	46.1
CDY35313	Canola	nucleus	44.42	46.1
KRH15576	Soybean	cytosol	46.36	45.8
KRH05433	Soybean	cytosol	45.87	45.76
GSMUA_Achr6P02050_001	Banana	cytosol	11.65	30.97
GSMUA_Achr4P31410_001	Banana	cytosol	33.01	30.91
GSMUA_Achr4P22800_001	Banana	cytosol	32.52	30.88
GSMUA_Achr5P02600_001	Banana	cytosol	32.28	30.3
GSMUA_Achr2P20050_001	Banana	nucleus	19.42	27.03
GSMUA_Achr10P...	Banana	nucleus	28.64	26.22
GSMUA_Achr6P35280_001	Banana	endoplasmic reticulum	18.93	25.41
GSMUA_Achr7P22680_001	Banana	cytosol	27.67	24.52
GSMUA_Achr10P...	Banana	cytosol	24.76	24.17
GSMUA_Achr3P17820_001	Banana	cytosol	27.91	24.06
GSMUA_AchrUn_...	Banana	mitochondrion, nucleus	26.7	23.86
GSMUA_Achr1P16160_001	Banana	nucleus	25.0	22.99
GSMUA_Achr1P18950_001	Banana	nucleus	25.49	22.93
GSMUA_Achr6P14440_001	Banana	nucleus	9.47	22.81
GSMUA_Achr7P18240_001	Banana	cytosol	25.97	22.67
GSMUA_AchrUn_...	Banana	mitochondrion, nucleus	24.76	22.22
GSMUA_Achr10P...	Banana	cytosol	23.54	21.46
GSMUA_Achr7P02870_001	Banana	mitochondrion	14.32	19.6
GSMUA_Achr11P...	Banana	mitochondrion	21.84	19.48
GSMUA_Achr8P32220_001	Banana	cytosol	20.39	19.22

Protein Annotations

EnsemblPlants:GSMUA_Achr7P09640_001	EnsemblPlants:GSMUA_Achr7T09640_001	EnsemblPlantsGene:GSMUA_Achr7G09640_001	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR32295	PANTHER:PTHR32295:SF88	PFAM:PF00612	PFscan:PS50096
SEG:seg	UniParc:UPI00029562BF	UniProt:M0TG52	MapMan:35.2	:	:

Description

IQ calmodulin-binding motif domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr7G09640_001]

Coordinates

chr7:+:7844285..7846105

Molecular Weight (calculated)

45933.8 Da

IEP (calculated)

11.686

GRAVY (calculated)

-0.514

Length

412 amino acids

Sequence
(BLAST)

001: MGGSGKWIKS LVVVLKKQDQ DSCVIAAVSV VFLFNLFSHG WWKKLWRSSS WDHLSLRRGS RGSSRRSAAS EESDASSVCD AFAAAAAAVV RAPPKDFRAV
101: RQEWAAIRIQ TAFRAFLARR ALRALRGIVR LQAIVRGRQV RKQAAVTLRC MQALVRVQAR IRARRVRMST EGQVVQRLLE ARRGTLDPLK EAEEGWCDSP
201: GTVEEVRAKL QMRHRGAVKR ERAIAYALSQ QVNTISISTL GGRSKQSSVS SKHSGFDQSN GSWSWLERWM AAKPWESRLM EHKPSTVRIK KNNITTRSSA
301: SSSSIFMSTP FSSSTLLASE RTEDSSSSRP NYMSLTESIK AKQKALNAQN STPQGHSSLA VRSHRKTLSG INTDSSIFSC DLENQPPQRE KSSVRKMEKV
401: NGYHGKLHTY GS

Best Arabidopsis Sequence Match ( AT2G26180.1 )
(BLAST)

001: MGASGKWVKS IIGLKKLEKD EIEKGNGKNK KWKLWRTTSV DSWKGFRGKH RSDSDGVDSS TVYSAAVATV LRAPPKDFKA VREEWAAIRI QTAFRGFLAR
101: RALRALKGIV RLQALVRGRQ VRKQAAVTLR CMQALVRVQA RVRARRVRMT VEGQAVQKLL DEHRTKSDLL KEVEEGWCDR KGTVDDIKSK LQQRQEGAFK
201: RERALAYALA QKQWRSTTSS NLKTNSSISY LKSQEFDKNS WGWSWLERWM AARPWETRLM DTVDTAATPP PLPHKHLKSP ETADVVQVRR NNVTTRVSAK
301: PPPHMLSSSP GYEFNESSGS SSICTSTTPV SGKTGLVSDN SSSQAKKHKP SYMSLTESTK AKRRTNRGLR QSMDEFQFMK NSGMFTGELK TSPSSDPFVS
401: FSKPLGVPTR FEKPRG

Arabidopsis Description

IQD6At2g26180 [Source:UniProtKB/TrEMBL;Acc:O64852]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.