Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 2
- plastid 1
- mitochondrion 3
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G03040.1 | GSMUA_Achr10P... | AT3G27960.1 | 21798944 |
| AT5G03040.1 | GSMUA_Achr2P09630_001 | AT3G27960.1 | 21798944 |
| AT5G03040.1 | GSMUA_Achr10P... | AT4G09570.1 | 19130088 |
| AT5G03040.1 | GSMUA_Achr2P08110_001 | AT4G09570.1 | 19130088 |
| AT5G03040.1 | GSMUA_Achr6P25560_001 | AT4G09570.1 | 19130088 |
| AT5G03040.1 | GSMUA_Achr9P08680_001 | AT4G09570.1 | 19130088 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr7P22680_001 | Banana | cytosol | 58.61 | 57.85 |
| GSMUA_Achr10P... | Banana | cytosol | 50.98 | 55.45 |
| GSMUA_Achr3P17820_001 | Banana | cytosol | 54.9 | 52.72 |
| PGSC0003DMT400004433 | Potato | cytosol | 54.68 | 52.29 |
| GSMUA_Achr10P... | Banana | nucleus | 50.98 | 52.0 |
| Solyc09g007410.2.1 | Tomato | cytosol | 54.47 | 51.76 |
| TraesCS3D01G346500.1 | Wheat | cytosol | 56.21 | 51.7 |
| TraesCS3B01G385100.1 | Wheat | cytosol | 56.21 | 51.7 |
| HORVU3Hr1G087500.2 | Barley | cytosol | 56.21 | 51.7 |
| TraesCS3A01G352500.1 | Wheat | cytosol | 55.99 | 51.5 |
| VIT_08s0040g02360.t01 | Wine grape | nucleus | 53.16 | 50.94 |
| KXG33651 | Sorghum | cytosol | 54.9 | 50.6 |
| Os01t0833800-01 | Rice | plasma membrane | 54.68 | 50.2 |
| GSMUA_Achr11P... | Banana | mitochondrion | 50.11 | 49.78 |
| Solyc10g084280.1.1 | Tomato | nucleus | 51.63 | 49.58 |
| PGSC0003DMT400027139 | Potato | cytosol | 51.63 | 49.27 |
| Zm00001d042973_P007 | Maize | cytosol | 54.25 | 49.11 |
| KRH67648 | Soybean | nucleus | 50.54 | 48.64 |
| KRG95941 | Soybean | nucleus | 49.89 | 48.01 |
| PGSC0003DMT400045333 | Potato | cytosol | 49.02 | 47.77 |
| Solyc10g086060.1.1 | Tomato | cytosol | 49.02 | 47.77 |
| CDY11238 | Canola | cytosol, plastid | 42.48 | 47.22 |
| KRH19825 | Soybean | cytosol | 47.71 | 46.6 |
| GSMUA_Achr7P18240_001 | Banana | cytosol | 46.84 | 45.55 |
| KRH32420 | Soybean | cytosol | 46.84 | 45.36 |
| CDX80849 | Canola | cytosol, plastid | 41.83 | 45.07 |
| CDY04876 | Canola | nucleus, plastid | 42.27 | 43.6 |
| Bra028854.1-P | Field mustard | nucleus, plastid | 42.27 | 43.6 |
| CDY55696 | Canola | nucleus, plastid | 40.96 | 43.02 |
| CDY10410 | Canola | cytosol, plastid | 41.39 | 42.79 |
| AT5G03040.1 | Thale cress | cytosol, plastid | 42.48 | 42.3 |
| Bra009554.1-P | Field mustard | cytosol | 41.39 | 40.34 |
| CDX70333 | Canola | cytosol | 42.05 | 40.21 |
| AT3G09710.2 | Thale cress | nucleus | 37.47 | 36.75 |
| Bra034081.1-P | Field mustard | nucleus | 34.64 | 35.81 |
| Bra001299.1-P | Field mustard | nucleus | 32.68 | 31.71 |
| HORVU1Hr1G071700.1 | Barley | nucleus | 34.86 | 31.13 |
| TraesCS1A01G288100.2 | Wheat | nucleus | 35.29 | 31.09 |
| TraesCS1D01G287100.2 | Wheat | cytosol | 35.51 | 30.81 |
| CDY07937 | Canola | nucleus | 31.81 | 30.54 |
| CDX73992 | Canola | nucleus | 31.59 | 30.4 |
| GSMUA_Achr6P02050_001 | Banana | cytosol | 10.24 | 30.32 |
| GSMUA_Achr1P18950_001 | Banana | nucleus | 30.07 | 30.13 |
| TraesCS1B01G297500.1 | Wheat | cytosol | 34.64 | 30.11 |
| CDY22198 | Canola | cytosol | 36.38 | 29.87 |
| CDY41307 | Canola | cytosol | 35.51 | 29.8 |
| OQU78148 | Sorghum | cytosol | 35.95 | 29.46 |
| Os05t0463300-00 | Rice | plasma membrane | 32.03 | 29.28 |
| GSMUA_Achr7P02870_001 | Banana | mitochondrion | 19.17 | 29.24 |
| GSMUA_Achr1P16160_001 | Banana | nucleus | 28.1 | 28.79 |
| GSMUA_AchrUn_... | Banana | mitochondrion, nucleus | 28.54 | 28.42 |
| GSMUA_Achr2P20050_001 | Banana | nucleus | 17.65 | 27.36 |
| GSMUA_Achr8P32220_001 | Banana | cytosol | 25.93 | 27.23 |
| GSMUA_Achr6P04930_001 | Banana | cytosol | 23.75 | 26.85 |
| GSMUA_Achr2P16650_001 | Banana | nucleus | 24.62 | 26.65 |
| GSMUA_Achr6P14440_001 | Banana | nucleus | 9.8 | 26.32 |
| GSMUA_Achr5P02600_001 | Banana | cytosol | 25.05 | 26.2 |
| GSMUA_Achr6P35280_001 | Banana | endoplasmic reticulum | 17.21 | 25.73 |
| GSMUA_Achr4P31410_001 | Banana | cytosol | 24.18 | 25.23 |
| GSMUA_Achr10P... | Banana | cytosol | 24.84 | 25.22 |
| GSMUA_Achr4P22800_001 | Banana | cytosol | 23.75 | 25.12 |
| GSMUA_Achr10P... | Banana | cytosol | 23.09 | 25.06 |
| GSMUA_Achr7P09640_001 | Banana | endoplasmic reticulum | 22.22 | 24.76 |
| Zm00001d038395_P005 | Maize | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 33.33 | 23.54 |
| GSMUA_Achr2P15730_001 | Banana | cytosol | 20.91 | 21.77 |
Protein Annotations
| EnsemblPlants:GSMUA_AchrUn_randomP01550_001 | EnsemblPlants:GSMUA_AchrUn_randomT01550_001 | EnsemblPlantsGene:GSMUA_AchrUn_randomG01550_001 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:DUF4005 | InterPro:IPR000048 | InterPro:IQ_motif_EF-hand-BS | ncoils:Coil | PANTHER:PTHR32295 | PANTHER:PTHR32295:SF28 |
| PFAM:PF00612 | PFAM:PF13178 | PFscan:PS50096 | SEG:seg | SMART:SM00015 | UniParc:UPI000294E9A4 |
| UniProt:M0U5G7 | MapMan:35.1 | : | : | : | : |
Description
Putative Protein IQ-DOMAIN 1 [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG01550_001]
Coordinates
chrchrUn_random:-:6171465..6175104
Molecular Weight (calculated)
51476.7 Da
IEP (calculated)
10.802
GRAVY (calculated)
-0.838
Length
459 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRRGKWFIA VSRAFNPESN EKKSQKNHKS KRKWKLRRPK HYLPVPSEVA EKSITDATKP PDCYLSQGIK LVKVEDEHSK NAYNVALTSA AAAETADVAA
101: QAAAAVVGLT ITRLMGKSRE EAAAIKIQTA FRGYLARIAL QGLRRLVRLK TLVDGNAAKH QTSNTLHCMQ TLARVQSQIR SRRIRMREEN QALQRQLQLK
201: HEMELEKQKV GDEWDDSLWS KEQIEANLVN KQEAAIRRER ALAYAFSHQQ WKNSSREVTP TFTNPNNPQW GWSWLERWMA SRPWENYNAI NKDDTNLQRT
301: PVDHQKSSHS SSHHSPLTPP SKHSSAGKEK SVSSRAATDD SRSMVSLQSG RRRRQSIAGS SFGDDASLAS SPSIPSYMAS TESARAKSRF QRPPNNNVET
401: PERGSVNAVK KHLSYPVADK CSILSPARIR RNSDPPKLDV ASLKDVAICV EQTSNGGSR
101: QAAAAVVGLT ITRLMGKSRE EAAAIKIQTA FRGYLARIAL QGLRRLVRLK TLVDGNAAKH QTSNTLHCMQ TLARVQSQIR SRRIRMREEN QALQRQLQLK
201: HEMELEKQKV GDEWDDSLWS KEQIEANLVN KQEAAIRRER ALAYAFSHQQ WKNSSREVTP TFTNPNNPQW GWSWLERWMA SRPWENYNAI NKDDTNLQRT
301: PVDHQKSSHS SSHHSPLTPP SKHSSAGKEK SVSSRAATDD SRSMVSLQSG RRRRQSIAGS SFGDDASLAS SPSIPSYMAS TESARAKSRF QRPPNNNVET
401: PERGSVNAVK KHLSYPVADK CSILSPARIR RNSDPPKLDV ASLKDVAICV EQTSNGGSR
001: MGKKAKWFSS VKKAFSPDSK KSKQKLAEGQ NGVISNPPVV DNVRQSSSSP PPALAPREVR VAEVIVERNR DLSPPSTADA VNVTATDVPV VPSSSAPGVV
101: RRATPTRFAG KSNEEAAAIL IQTIFRGYLA RRALRAMRGL VRLKLLMEGS VVKRQAANTL KCMQTLSRVQ SQIRARRIRM SEENQARQKQ LLQKHAKELA
201: GLKNGDNWND SIQSKEKVEA NLLSKYEATM RRERALAYSY SHQQNWKNNS KSGNPMFMDP SNPTWGWSWL ERWMAGRPLE SSEKEQSNSN NDNAASVKGS
301: INRNEAAKSL TRNGSTQPNT PSSARGTPRN KNSFFSPPTP SRLNQSSRKS NDDDSKSTIS VLSERNRRHS IAGSSVRDDE SLAGSPALPS YMVPTKSARA
401: RLKPQSPLGG TTQENEGFTD KASAKKRLSY PTSPALPKPR RFSAPPKVES GGVTVTNGAG S
101: RRATPTRFAG KSNEEAAAIL IQTIFRGYLA RRALRAMRGL VRLKLLMEGS VVKRQAANTL KCMQTLSRVQ SQIRARRIRM SEENQARQKQ LLQKHAKELA
201: GLKNGDNWND SIQSKEKVEA NLLSKYEATM RRERALAYSY SHQQNWKNNS KSGNPMFMDP SNPTWGWSWL ERWMAGRPLE SSEKEQSNSN NDNAASVKGS
301: INRNEAAKSL TRNGSTQPNT PSSARGTPRN KNSFFSPPTP SRLNQSSRKS NDDDSKSTIS VLSERNRRHS IAGSSVRDDE SLAGSPALPS YMVPTKSARA
401: RLKPQSPLGG TTQENEGFTD KASAKKRLSY PTSPALPKPR RFSAPPKVES GGVTVTNGAG S
Arabidopsis Description
iqd2At5g03040/F15A17_70 [Source:UniProtKB/TrEMBL;Acc:Q93ZH7]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.