Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX73992 | Canola | nucleus | 91.42 | 91.61 |
| AT3G09710.2 | Thale cress | nucleus | 62.34 | 63.68 |
| CDY22198 | Canola | cytosol | 66.53 | 56.89 |
| CDY41307 | Canola | cytosol | 64.44 | 56.31 |
| CDX80849 | Canola | cytosol, plastid | 45.61 | 51.17 |
| CDY11238 | Canola | cytosol, plastid | 44.14 | 51.09 |
| CDY04876 | Canola | nucleus, plastid | 46.44 | 49.89 |
| CDY10410 | Canola | cytosol, plastid | 46.23 | 49.77 |
| CDY55696 | Canola | nucleus, plastid | 45.19 | 49.43 |
| CDX70333 | Canola | cytosol | 45.61 | 45.42 |
| KRG95941 | Soybean | nucleus | 39.12 | 39.2 |
| VIT_08s0040g02360.t01 | Wine grape | nucleus | 38.08 | 38.0 |
| KRH67648 | Soybean | nucleus | 37.87 | 37.95 |
| KRH19825 | Soybean | cytosol | 35.98 | 36.6 |
| KRH32420 | Soybean | cytosol | 35.98 | 36.29 |
| KXG21175 | Sorghum | cytosol | 34.52 | 34.88 |
| GSMUA_Achr10P... | Banana | nucleus | 32.64 | 34.67 |
| Zm00001d035492_P009 | Maize | cytosol | 34.31 | 34.45 |
| PGSC0003DMT400004433 | Potato | cytosol | 34.52 | 34.38 |
| GSMUA_Achr3P17820_001 | Banana | cytosol | 34.1 | 34.1 |
| Solyc10g084280.1.1 | Tomato | nucleus | 33.89 | 33.89 |
| PGSC0003DMT400045333 | Potato | cytosol | 33.26 | 33.76 |
| Solyc10g086060.1.1 | Tomato | cytosol | 33.26 | 33.76 |
| Os05t0123200-01 | Rice | plasma membrane | 33.47 | 33.76 |
| Zm00001d010975_P003 | Maize | cytosol | 33.68 | 33.68 |
| TraesCS1A01G064100.1 | Wheat | cytosol | 33.68 | 33.54 |
| TraesCS1D01G064700.1 | Wheat | cytosol | 33.47 | 33.47 |
| PGSC0003DMT400027139 | Potato | cytosol | 33.68 | 33.47 |
| TraesCS1B01G082100.1 | Wheat | cytosol | 33.47 | 33.33 |
| GSMUA_Achr7P18240_001 | Banana | cytosol | 32.85 | 33.26 |
| Solyc09g007410.2.1 | Tomato | cytosol | 33.47 | 33.13 |
| HORVU1Hr1G013210.1 | Barley | cytosol | 33.47 | 33.06 |
| CDX95328 | Canola | cytosol | 29.92 | 32.13 |
| CDY23202 | Canola | cytosol | 29.71 | 31.91 |
| GSMUA_AchrUn_... | Banana | mitochondrion, nucleus | 30.54 | 31.81 |
| GSMUA_Achr7P22680_001 | Banana | cytosol | 29.29 | 30.11 |
| GSMUA_Achr10P... | Banana | cytosol | 26.57 | 30.09 |
| TraesCS3D01G543500.1 | Wheat | cytosol | 30.96 | 29.84 |
| Os01t0833800-01 | Rice | plasma membrane | 29.29 | 28.0 |
| TraesCS3B01G603500.1 | Wheat | cytosol, mitochondrion | 30.75 | 27.95 |
| TraesCS3B01G385100.1 | Wheat | cytosol | 28.66 | 27.45 |
| HORVU3Hr1G087500.2 | Barley | cytosol | 28.66 | 27.45 |
| TraesCS3D01G346500.1 | Wheat | cytosol | 28.66 | 27.45 |
| TraesCS3A01G352500.1 | Wheat | cytosol | 28.66 | 27.45 |
| KXG33651 | Sorghum | cytosol | 28.45 | 27.31 |
| TraesCS3A01G538100.1 | Wheat | cytosol, mitochondrion | 30.33 | 27.31 |
| CDY27925 | Canola | plastid | 14.85 | 26.79 |
| CDY17214 | Canola | cytosol, plastid | 14.85 | 26.79 |
| Zm00001d042973_P007 | Maize | cytosol | 28.03 | 26.43 |
| GSMUA_Achr11P... | Banana | mitochondrion | 25.1 | 25.97 |
| HORVU3Hr1G117830.2 | Barley | endoplasmic reticulum, extracellular | 30.75 | 25.17 |
| CDY38525 | Canola | cytosol | 21.34 | 24.7 |
| CDY32322 | Canola | cytosol, plastid | 12.55 | 23.17 |
| CDY37387 | Canola | cytosol | 17.99 | 22.4 |
| CDY62768 | Canola | cytosol | 12.76 | 22.02 |
| CDX83237 | Canola | cytosol | 23.01 | 21.7 |
| CDY20099 | Canola | cytosol | 11.72 | 21.21 |
| CDY10618 | Canola | cytosol | 17.99 | 21.18 |
| CDY35313 | Canola | nucleus | 17.36 | 20.91 |
| OQU78148 | Sorghum | cytosol | 24.27 | 20.71 |
| CDY24286 | Canola | cytosol | 17.36 | 20.54 |
| CDX77034 | Canola | cytosol | 16.95 | 20.45 |
| CDX92933 | Canola | cytosol, plastid | 17.15 | 20.45 |
| HORVU1Hr1G071700.1 | Barley | nucleus | 21.76 | 20.23 |
| Os05t0463300-00 | Rice | plasma membrane | 21.13 | 20.12 |
| TraesCS1D01G287100.2 | Wheat | cytosol | 22.18 | 20.04 |
| TraesCS1A01G288100.2 | Wheat | nucleus | 21.55 | 19.77 |
| CDX96427 | Canola | cytosol | 10.04 | 19.75 |
| CDX72935 | Canola | cytosol | 10.46 | 19.01 |
| TraesCS1B01G297500.1 | Wheat | cytosol | 20.71 | 18.75 |
| CDX90766 | Canola | nucleus | 16.74 | 18.56 |
| CDX92931 | Canola | mitochondrion, nucleus | 9.83 | 18.43 |
| CDY05111 | Canola | nucleus | 16.32 | 18.18 |
| CDY08131 | Canola | nucleus | 12.55 | 17.44 |
| CDY30433 | Canola | cytosol | 16.32 | 17.33 |
| CDY58749 | Canola | cytosol | 16.53 | 17.32 |
| CDY05984 | Canola | nucleus | 17.78 | 17.17 |
| CDY05931 | Canola | nucleus | 12.55 | 17.05 |
| CDX71881 | Canola | nucleus | 17.57 | 17.0 |
| CDY48305 | Canola | nucleus | 13.18 | 16.8 |
| CDY15200 | Canola | nucleus | 17.78 | 16.63 |
| CDX90011 | Canola | nucleus | 17.57 | 16.54 |
| CDY26241 | Canola | nucleus | 12.97 | 16.53 |
| CDY39505 | Canola | cytosol | 13.6 | 16.46 |
| Zm00001d038395_P005 | Maize | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 21.97 | 16.15 |
| CDY23391 | Canola | cytosol | 15.48 | 16.05 |
| CDX91859 | Canola | mitochondrion, nucleus | 17.78 | 16.04 |
| CDY08120 | Canola | mitochondrion, nucleus | 15.9 | 16.03 |
| CDY05917 | Canola | mitochondrion, nucleus | 15.9 | 16.0 |
| CDY69140 | Canola | mitochondrion, nucleus | 17.36 | 15.81 |
| CDX83468 | Canola | plasma membrane | 17.36 | 15.06 |
| CDX86983 | Canola | nucleus | 14.64 | 14.74 |
| CDY44247 | Canola | nucleus | 16.95 | 14.57 |
| CDY00196 | Canola | nucleus | 14.44 | 14.53 |
| CDY24282 | Canola | mitochondrion | 9.0 | 14.1 |
| CDX79809 | Canola | nucleus | 17.15 | 13.71 |
| CDY05918 | Canola | mitochondrion | 9.0 | 13.69 |
| CDY66694 | Canola | nucleus | 16.74 | 13.36 |
| CDX96426 | Canola | nucleus, plastid | 1.46 | 6.86 |
| CDX72934 | Canola | nucleus, plastid | 1.46 | 6.86 |
Protein Annotations
| EnsemblPlants:CDY07937 | EnsemblPlantsGene:GSBRNA2T00125141001 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR000048 |
| InterPro:IQ_motif_EF-hand-BS | PANTHER:PTHR32295 | PANTHER:PTHR32295:SF28 | PFAM:PF00612 | PFscan:PS50096 | ProteinID:CDY07937 |
| ProteinID:CDY07937.1 | SEG:seg | SMART:SM00015 | UniParc:UPI0004EACA62 | UniProt:A0A078F4E6 | MapMan:35.1 |
Description
BnaC03g35860DBnaC03g35860D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F4E6]
Coordinates
chrLK031982:-:201498..203570
Molecular Weight (calculated)
53470.4 Da
IEP (calculated)
11.228
GRAVY (calculated)
-1.021
Length
478 amino acids
Sequence
(BLAST)
(BLAST)
001: MVKKAKWLEN VKKAFSPDVK KLKHQSVEES VISYPVLVAR SRSSPPQFEV RVDEVNYEHK KKKNLSPPPS EEQENVLGDS TPESVPPPAS PDRFAGEEAA
101: AIFIQSTFRG HLARREALRM RRWARLKLLM EGLVVQRKAA NTLRSMQTFT RMQSKIRSMR IRMAEESQAR HKHLLQKHAK KIGGSKNGVN NQSKKQVEAG
201: LLNKNEAATM RKERALAYAS THQQHLKSNL KHTYTMFMDP NNLTWGWSWL ERWTADKESS EKEQSNTVKP AVKTSTNRSS HGEETTKSSN RKKLNSSTQP
301: NTTSTSSSSS STTRNPRKNK PTTPSIRPKT TDEITKSFDK NRRNIIARSS VSDDEGLVSS TARRHNMVPT KPADEIPKSS EKNRRQGIAR SSVSDDEGLA
401: SSVARRRNMV PTNPARGNLK AQSSSAATKA TKEESNDVLR EKAPAAKKRV SPAPKPRRSS APPKVENSVL KAVKTPCA
101: AIFIQSTFRG HLARREALRM RRWARLKLLM EGLVVQRKAA NTLRSMQTFT RMQSKIRSMR IRMAEESQAR HKHLLQKHAK KIGGSKNGVN NQSKKQVEAG
201: LLNKNEAATM RKERALAYAS THQQHLKSNL KHTYTMFMDP NNLTWGWSWL ERWTADKESS EKEQSNTVKP AVKTSTNRSS HGEETTKSSN RKKLNSSTQP
301: NTTSTSSSSS STTRNPRKNK PTTPSIRPKT TDEITKSFDK NRRNIIARSS VSDDEGLVSS TARRHNMVPT KPADEIPKSS EKNRRQGIAR SSVSDDEGLA
401: SSVARRRNMV PTNPARGNLK AQSSSAATKA TKEESNDVLR EKAPAAKKRV SPAPKPRRSS APPKVENSVL KAVKTPCA
001: MVKKAKWLKN VKKAFSPDSK KLKHESVECQ DSVISYPVLI ATSRSSSPQF EVRVDEVNYE QKKNLYPPSS DSVTATVAHV LVDSPPSSPE SVHQAIVVNR
101: FAGKSKEEAA AILIQSTFRG HLARRESQVM RGQERLKLLM EGSVVQRQAA ITLKCMQTLS RVQSQIRSRR IRMSEENQAR HKQLLQKHAK ELGGLKNGGN
201: WNYSNQSKEQ VEAGMLHKYE ATMRRERALA YAFTHQQNLK SFSKTANPMF MDPSNPTWGW SWLERWMAGR PWESSEKEQN TTNNDNSSVK NSTNRNSQGG
301: ETAKSSNRNK LNSSTKPNTP SASSTATRNP RKKRPIPSSI KSKSSDDEAK SSERNRRPSI ARPSVSDDET LSSSTARRSS NLIPTTKSAR GKPKSQTSSR
401: VAVTTSTTEE SSILPEKAPA KKRLSTSASP APKPRRSSAP PKVEKGVLKA ERTP
101: FAGKSKEEAA AILIQSTFRG HLARRESQVM RGQERLKLLM EGSVVQRQAA ITLKCMQTLS RVQSQIRSRR IRMSEENQAR HKQLLQKHAK ELGGLKNGGN
201: WNYSNQSKEQ VEAGMLHKYE ATMRRERALA YAFTHQQNLK SFSKTANPMF MDPSNPTWGW SWLERWMAGR PWESSEKEQN TTNNDNSSVK NSTNRNSQGG
301: ETAKSSNRNK LNSSTKPNTP SASSTATRNP RKKRPIPSSI KSKSSDDEAK SSERNRRPSI ARPSVSDDET LSSSTARRSS NLIPTTKSAR GKPKSQTSSR
401: VAVTTSTTEE SSILPEKAPA KKRLSTSASP APKPRRSSAP PKVEKGVLKA ERTP
Arabidopsis Description
IQD1IQ-domain 1 [Source:UniProtKB/TrEMBL;Acc:F4J1A4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.