Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY38525 | Canola | cytosol | 76.92 | 94.43 |
| AT2G26410.2 | Thale cress | cytosol | 71.99 | 69.26 |
| VIT_13s0019g03890.t01 | Wine grape | cytosol | 37.08 | 39.0 |
| Solyc04g050050.2.1 | Tomato | cytosol | 30.18 | 38.83 |
| PGSC0003DMT400010610 | Potato | nucleus | 33.73 | 37.17 |
| CDX95328 | Canola | cytosol | 32.35 | 36.85 |
| CDY23202 | Canola | cytosol | 32.15 | 36.63 |
| CDY11238 | Canola | cytosol, plastid | 27.22 | 33.41 |
| CDX80849 | Canola | cytosol, plastid | 26.63 | 31.69 |
| CDY10410 | Canola | cytosol, plastid | 26.63 | 30.41 |
| CDY04876 | Canola | nucleus, plastid | 26.04 | 29.66 |
| CDY17214 | Canola | cytosol, plastid | 15.38 | 29.43 |
| CDY55696 | Canola | nucleus, plastid | 24.85 | 28.83 |
| CDY27925 | Canola | plastid | 14.99 | 28.68 |
| CDY32322 | Canola | cytosol, plastid | 14.6 | 28.57 |
| CDY20099 | Canola | cytosol | 14.79 | 28.41 |
| CDX70333 | Canola | cytosol | 26.43 | 27.92 |
| CDY62768 | Canola | cytosol | 14.4 | 26.35 |
| CDX77034 | Canola | cytosol | 18.54 | 23.74 |
| CDX96427 | Canola | cytosol | 11.24 | 23.46 |
| CDY35313 | Canola | nucleus | 18.34 | 23.43 |
| CDX73992 | Canola | nucleus | 21.7 | 23.06 |
| CDY07937 | Canola | nucleus | 21.7 | 23.01 |
| CDY30433 | Canola | cytosol | 20.32 | 22.89 |
| CDY23391 | Canola | cytosol | 20.51 | 22.56 |
| CDY24286 | Canola | cytosol | 17.95 | 22.52 |
| CDY37387 | Canola | cytosol | 16.96 | 22.4 |
| CDY10618 | Canola | cytosol | 17.75 | 22.17 |
| CDX72935 | Canola | cytosol | 11.44 | 22.05 |
| CDY22198 | Canola | cytosol | 24.06 | 21.82 |
| CDY41307 | Canola | cytosol | 23.47 | 21.75 |
| CDX92933 | Canola | cytosol, plastid | 17.16 | 21.7 |
| CDY05984 | Canola | nucleus | 20.51 | 21.01 |
| CDY05917 | Canola | mitochondrion, nucleus | 19.53 | 20.84 |
| CDX71881 | Canola | nucleus | 20.12 | 20.65 |
| CDY08120 | Canola | mitochondrion, nucleus | 18.93 | 20.25 |
| CDY05111 | Canola | nucleus | 16.77 | 19.81 |
| CDY15200 | Canola | nucleus | 19.92 | 19.77 |
| CDX90011 | Canola | nucleus | 19.72 | 19.68 |
| CDX86983 | Canola | nucleus | 18.34 | 19.58 |
| CDY00196 | Canola | nucleus | 18.15 | 19.37 |
| CDX92931 | Canola | mitochondrion, nucleus | 9.66 | 19.22 |
| CDX90766 | Canola | nucleus | 16.17 | 19.03 |
| CDY58749 | Canola | cytosol | 16.96 | 18.86 |
| CDX83468 | Canola | plasma membrane | 19.72 | 18.15 |
| CDY69140 | Canola | mitochondrion, nucleus | 18.54 | 17.9 |
| CDY39505 | Canola | cytosol | 13.81 | 17.72 |
| CDY05931 | Canola | nucleus | 12.23 | 17.61 |
| CDX79809 | Canola | nucleus | 20.71 | 17.56 |
| CDX91859 | Canola | mitochondrion, nucleus | 18.34 | 17.55 |
| CDY66694 | Canola | nucleus | 20.71 | 17.53 |
| CDY44247 | Canola | nucleus | 19.13 | 17.45 |
| CDY24282 | Canola | mitochondrion | 10.45 | 17.38 |
| CDY48305 | Canola | nucleus | 12.82 | 17.33 |
| CDY26241 | Canola | nucleus | 12.82 | 17.33 |
| CDY08131 | Canola | nucleus | 11.64 | 17.15 |
| CDY05918 | Canola | mitochondrion | 9.27 | 14.97 |
| CDX96426 | Canola | nucleus, plastid | 1.78 | 8.82 |
| CDX72934 | Canola | nucleus, plastid | 1.58 | 7.84 |
Protein Annotations
| EnsemblPlants:CDX83237 | EnsemblPlantsGene:GSBRNA2T00138786001 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR000048 |
| InterPro:IQ_motif_EF-hand-BS | ncoils:Coil | PANTHER:PTHR32295 | PANTHER:PTHR32295:SF6 | PFscan:PS50096 | ProteinID:CDX83237 |
| ProteinID:CDX83237.1 | SEG:seg | SMART:SM00015 | UniParc:UPI0004EEEC6A | MapMan:35.1 | : |
Description
BnaA03g22690D
Coordinates
chrLK031832:+:579554..581547
Molecular Weight (calculated)
56167.7 Da
IEP (calculated)
10.980
GRAVY (calculated)
-0.932
Length
507 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKGWLACVS APCLPTGKDK KHQKQEKEKK KWFGKQKSRE SIEFSLEETT PVDPSSSSIT RPSLPPLPDF PLLPPPSSPP PPPPFPPYAN NKGYDASKEA
101: KTRQALALAS AVAAEAALVA AHAAVEVTRL TLNTSTRQIV ESKEEAAAIK IQNAYRCYKA RHTLRMLRGM VRLKTLLQGK YVKRQMNAML SSMQTLTRLQ
201: TQIQARRNRL SEENKARHTL IQQKGHQKEG QNQNLIIAGD FDSSNKSKAQ IKAQFVNRKE ASVRRERALA YAYSHQQTWR NSTKHPHQTL MDADTPHWGW
301: SWLDRWMASR PWEPISNDDQ ASLKRENSIK TSPARSKEPK SVSRKANQSE GVNCRHSIGG GSAENLDSSL SRRSSFGNTE TEKSKASVET TSNMTTNPQP
401: LKKPKGSGGT AKNMVNTQAM KSKDSVGTRY LANTQALNSK VSVGQPSNLG SQKKVVSDKN KLPQMVMPKK RRSSSISLAS TKKVSDSDKA TTRAANEEKK
501: RRNGSTG
101: KTRQALALAS AVAAEAALVA AHAAVEVTRL TLNTSTRQIV ESKEEAAAIK IQNAYRCYKA RHTLRMLRGM VRLKTLLQGK YVKRQMNAML SSMQTLTRLQ
201: TQIQARRNRL SEENKARHTL IQQKGHQKEG QNQNLIIAGD FDSSNKSKAQ IKAQFVNRKE ASVRRERALA YAYSHQQTWR NSTKHPHQTL MDADTPHWGW
301: SWLDRWMASR PWEPISNDDQ ASLKRENSIK TSPARSKEPK SVSRKANQSE GVNCRHSIGG GSAENLDSSL SRRSSFGNTE TEKSKASVET TSNMTTNPQP
401: LKKPKGSGGT AKNMVNTQAM KSKDSVGTRY LANTQALNSK VSVGQPSNLG SQKKVVSDKN KLPQMVMPKK RRSSSISLAS TKKVSDSDKA TTRAANEEKK
501: RRNGSTG
001: MGKNWLTCVS VACLSPGKDK KNQKPEKPKR KWSFGKQKSR ESFDFPLEET PPVDPSPSSV HRPYPPPPPL PDFAPQPLLP PPSPPPPPPA YTINTRIYGE
101: SKESKNRQAL ALASAVAAEA AVVAAHAAAE VIRLTTPSTP QIEESKEETA AIKIQNAYRC YTARRTLRAL RGMARLKSLL QGKYVKRQMN AMLSSMQTLT
201: RLQTQIQERR NRLSAENKTR HRLIQQKGHQ KENHQNLVTA GNFDSSNKSK EQIVARSVNR KEASVRRERA LAYAYSHQQT WRNSSKLPHQ TLMDTNTTDW
301: GWSWLERWMA SRPWDAESID DQVSVKSSLK RENSIKSSPA RSKTQKSASQ SSIQWPVNND TKSRKIEVTN RRHSIGGGSS ENAKDDESVG SSSSRRNSLD
401: NTQTVKSKVS VETTSNVSNA QTVKPKANVG AKRNLDNTKT LKSKSSVGTT GNLANTEAVK SKVNVGTTSM PKKEVVADKK KPPQMVLPKK RLSSSTSLGK
501: TKKLSDSDKA TTGVANGEKK RRNGGSS
101: SKESKNRQAL ALASAVAAEA AVVAAHAAAE VIRLTTPSTP QIEESKEETA AIKIQNAYRC YTARRTLRAL RGMARLKSLL QGKYVKRQMN AMLSSMQTLT
201: RLQTQIQERR NRLSAENKTR HRLIQQKGHQ KENHQNLVTA GNFDSSNKSK EQIVARSVNR KEASVRRERA LAYAYSHQQT WRNSSKLPHQ TLMDTNTTDW
301: GWSWLERWMA SRPWDAESID DQVSVKSSLK RENSIKSSPA RSKTQKSASQ SSIQWPVNND TKSRKIEVTN RRHSIGGGSS ENAKDDESVG SSSSRRNSLD
401: NTQTVKSKVS VETTSNVSNA QTVKPKANVG AKRNLDNTKT LKSKSSVGTT GNLANTEAVK SKVNVGTTSM PKKEVVADKK KPPQMVLPKK RLSSSTSLGK
501: TKKLSDSDKA TTGVANGEKK RRNGGSS
Arabidopsis Description
Iqd4IQ-domain 4 [Source:UniProtKB/TrEMBL;Acc:F4IUJ7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.