Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 1
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY17214 | Canola | cytosol, plastid | 80.87 | 84.53 |
| Bra021888.1-P | Field mustard | plastid | 78.7 | 84.17 |
| CDY27925 | Canola | plastid | 79.78 | 83.4 |
| AT2G33990.1 | Thale cress | cytosol | 73.29 | 77.19 |
| CDY32322 | Canola | cytosol, plastid | 43.68 | 46.72 |
| CDY20099 | Canola | cytosol | 44.4 | 46.59 |
| CDY37387 | Canola | cytosol | 30.69 | 22.14 |
| CDX77034 | Canola | cytosol | 31.41 | 21.97 |
| CDY35313 | Canola | nucleus | 31.41 | 21.91 |
| CDX96427 | Canola | cytosol | 19.13 | 21.81 |
| CDY10618 | Canola | cytosol | 30.69 | 20.94 |
| CDY24286 | Canola | cytosol | 30.32 | 20.79 |
| CDY11238 | Canola | cytosol, plastid | 30.69 | 20.58 |
| CDX72935 | Canola | cytosol | 19.49 | 20.53 |
| CDX92933 | Canola | cytosol, plastid | 29.6 | 20.45 |
| CDX80849 | Canola | cytosol, plastid | 30.69 | 19.95 |
| CDY58749 | Canola | cytosol | 31.05 | 18.86 |
| CDY55696 | Canola | nucleus, plastid | 29.6 | 18.76 |
| CDY39505 | Canola | cytosol | 26.71 | 18.73 |
| CDY04876 | Canola | nucleus, plastid | 29.96 | 18.65 |
| CDY10410 | Canola | cytosol, plastid | 29.24 | 18.24 |
| CDX92931 | Canola | mitochondrion, nucleus | 16.25 | 17.65 |
| CDY38525 | Canola | cytosol | 25.99 | 17.43 |
| CDX95328 | Canola | cytosol | 27.8 | 17.3 |
| CDX70333 | Canola | cytosol | 29.6 | 17.08 |
| CDY23202 | Canola | cytosol | 27.08 | 16.85 |
| CDY24282 | Canola | mitochondrion | 17.33 | 15.74 |
| CDY48305 | Canola | nucleus | 19.86 | 14.67 |
| CDY26241 | Canola | nucleus | 19.86 | 14.67 |
| CDX83237 | Canola | cytosol | 26.35 | 14.4 |
| CDX71881 | Canola | nucleus | 25.63 | 14.37 |
| CDY05984 | Canola | nucleus | 25.27 | 14.14 |
| CDY05111 | Canola | nucleus | 21.3 | 13.75 |
| CDY41307 | Canola | cytosol | 27.08 | 13.71 |
| CDY15200 | Canola | nucleus | 25.27 | 13.7 |
| CDX90766 | Canola | nucleus | 21.3 | 13.69 |
| CDX90011 | Canola | nucleus | 24.91 | 13.58 |
| CDY30433 | Canola | cytosol | 22.02 | 13.56 |
| CDY05917 | Canola | mitochondrion, nucleus | 23.1 | 13.47 |
| CDX73992 | Canola | nucleus | 23.1 | 13.42 |
| CDY08120 | Canola | mitochondrion, nucleus | 22.74 | 13.29 |
| CDY23391 | Canola | cytosol | 21.66 | 13.02 |
| CDY22198 | Canola | cytosol | 25.99 | 12.88 |
| CDY00196 | Canola | nucleus | 22.02 | 12.84 |
| CDX86983 | Canola | nucleus | 22.02 | 12.84 |
| CDY08131 | Canola | nucleus | 15.88 | 12.79 |
| CDY07937 | Canola | nucleus | 22.02 | 12.76 |
| CDY05931 | Canola | nucleus | 15.88 | 12.5 |
| CDY69140 | Canola | mitochondrion, nucleus | 22.38 | 11.81 |
| CDX91859 | Canola | mitochondrion, nucleus | 22.38 | 11.7 |
| CDY66694 | Canola | nucleus | 24.91 | 11.52 |
| CDY44247 | Canola | nucleus | 23.1 | 11.51 |
| CDX83468 | Canola | plasma membrane | 22.74 | 11.43 |
| CDX79809 | Canola | nucleus | 24.55 | 11.37 |
| CDY05918 | Canola | mitochondrion | 12.64 | 11.15 |
| CDX96426 | Canola | nucleus, plastid | 0.72 | 1.96 |
| CDX72934 | Canola | nucleus, plastid | 0.72 | 1.96 |
Protein Annotations
| EnsemblPlants:CDY62768 | EnsemblPlantsGene:GSBRNA2T00037578001 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR000048 |
| InterPro:IQ_motif_EF-hand-BS | PANTHER:PTHR32295 | PANTHER:PTHR32295:SF9 | PFscan:PS50096 | ProteinID:CDY62768 | ProteinID:CDY62768.1 |
| UniParc:UPI0004EE7F69 | UniProt:A0A078JAI2 | MapMan:35.1 | : | : | : |
Description
BnaC04g44330DBnaC04g44330D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JAI2]
Coordinates
chrLK034189:+:11863..12971
Molecular Weight (calculated)
31421.3 Da
IEP (calculated)
11.131
GRAVY (calculated)
-0.651
Length
277 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCGNFFKAI IGSKKGKQTS RKSEKGFIKP KASEKNVTRS ASLIFLSEDR AATRIQTAFK AYKARKMLRR LKGIARAKLL TEKQPVKKQA AVTLKYLHSW
101: SNIQSQIKAR RVGMVMEGRL IFKRLENQQK LEAKLHDIEV EWNGGTETKD EILERIHQRE EAMIKRERAL AYAFSLSSVT LSCEQWKADG KTQWLGGYEL
201: GNTNWGWSWK ERWIAARPWK VRYSLTPKKP KNLKTVCCKS ETKPNSPAKR GVSLSSVSAK APIPGAVNPR RLSFPGA
101: SNIQSQIKAR RVGMVMEGRL IFKRLENQQK LEAKLHDIEV EWNGGTETKD EILERIHQRE EAMIKRERAL AYAFSLSSVT LSCEQWKADG KTQWLGGYEL
201: GNTNWGWSWK ERWIAARPWK VRYSLTPKKP KNLKTVCCKS ETKPNSPAKR GVSLSSVSAK APIPGAVNPR RLSFPGA
001: MGSGNLIKAI IRLKKSKQGT EKKKTSAVKP KKGSKKKGTS LVTRSEDWAA TRIQTAFKAY KARKSLRRLK GIARAKLSTE KQSVKNQAVV TLRYLHSWSK
101: IQSEIKARRV CMVTEWRLKN KRLEHQQKLE AKLHDVEVEW NGGSETKDEI LERILQREEA TIKRERALAY AFSHQWKADG KTQWLGSYEL GNTNWGWSWK
201: ERWISARPWE VRYSVTPKKP KSSKTDSNSP AKRTVSLSSV PAKTPFPGAR NTVKPRRLSF PGA
101: IQSEIKARRV CMVTEWRLKN KRLEHQQKLE AKLHDVEVEW NGGSETKDEI LERILQREEA TIKRERALAY AFSHQWKADG KTQWLGSYEL GNTNWGWSWK
201: ERWISARPWE VRYSVTPKKP KSSKTDSNSP AKRTVSLSSV PAKTPFPGAR NTVKPRRLSF PGA
Arabidopsis Description
iqd9IQ-domain 9 [Source:UniProtKB/TrEMBL;Acc:Q0WNP8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.