Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 2
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G03040.1 | CDX86457 | AT3G27960.1 | 21798944 |
| AT5G03040.1 | CDY58518 | AT3G27960.1 | 21798944 |
| AT5G03040.1 | CDX90725 | AT4G09570.1 | 19130088 |
| AT5G03040.1 | CDY05064 | AT4G09570.1 | 19130088 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY11238 | Canola | cytosol, plastid | 80.18 | 86.2 |
| CDX80849 | Canola | cytosol, plastid | 82.43 | 85.92 |
| CDY04876 | Canola | nucleus, plastid | 86.04 | 85.84 |
| CDX70333 | Canola | cytosol | 92.79 | 85.83 |
| CDY55696 | Canola | nucleus, plastid | 82.21 | 83.52 |
| AT5G03040.1 | Thale cress | cytosol, plastid | 83.33 | 80.26 |
| KRG95941 | Soybean | nucleus | 52.48 | 48.85 |
| CDX73992 | Canola | nucleus | 52.03 | 48.43 |
| KRH67648 | Soybean | nucleus | 51.13 | 47.59 |
| GSMUA_Achr10P... | Banana | nucleus | 47.52 | 46.89 |
| Solyc10g084280.1.1 | Tomato | nucleus | 50.45 | 46.86 |
| VIT_08s0040g02360.t01 | Wine grape | nucleus | 50.45 | 46.76 |
| Solyc10g086060.1.1 | Tomato | cytosol | 49.32 | 46.5 |
| PGSC0003DMT400027139 | Potato | cytosol | 50.23 | 46.36 |
| PGSC0003DMT400045333 | Potato | cytosol | 49.1 | 46.28 |
| CDY07937 | Canola | nucleus | 49.77 | 46.23 |
| GSMUA_Achr3P17820_001 | Banana | cytosol | 49.1 | 45.61 |
| KRH32420 | Soybean | cytosol | 48.65 | 45.57 |
| KRH19825 | Soybean | cytosol | 48.2 | 45.53 |
| PGSC0003DMT400004433 | Potato | cytosol | 48.87 | 45.21 |
| Os05t0123200-01 | Rice | plasma membrane | 48.2 | 45.15 |
| KXG21175 | Sorghum | cytosol | 47.52 | 44.61 |
| Solyc09g007410.2.1 | Tomato | cytosol | 48.42 | 44.51 |
| Zm00001d035492_P009 | Maize | cytosol | 47.52 | 44.33 |
| TraesCS1A01G064100.1 | Wheat | cytosol | 47.52 | 43.96 |
| TraesCS1D01G064700.1 | Wheat | cytosol | 47.3 | 43.93 |
| TraesCS1B01G082100.1 | Wheat | cytosol | 47.3 | 43.75 |
| Zm00001d010975_P003 | Maize | cytosol | 47.07 | 43.72 |
| HORVU1Hr1G013210.1 | Barley | cytosol | 47.52 | 43.59 |
| CDY41307 | Canola | cytosol | 53.6 | 43.51 |
| CDY22198 | Canola | cytosol | 54.05 | 42.93 |
| CDX95328 | Canola | cytosol | 42.57 | 42.47 |
| CDY23202 | Canola | cytosol | 42.12 | 42.02 |
| GSMUA_AchrUn_... | Banana | mitochondrion, nucleus | 42.79 | 41.39 |
| GSMUA_Achr7P18240_001 | Banana | cytosol | 43.47 | 40.89 |
| GSMUA_Achr7P22680_001 | Banana | cytosol | 42.79 | 40.86 |
| GSMUA_Achr10P... | Banana | cytosol | 37.61 | 39.57 |
| TraesCS3D01G543500.1 | Wheat | cytosol | 43.69 | 39.11 |
| Os01t0833800-01 | Rice | plasma membrane | 42.34 | 37.6 |
| KXG33651 | Sorghum | cytosol | 41.89 | 37.35 |
| TraesCS3D01G346500.1 | Wheat | cytosol | 41.67 | 37.07 |
| HORVU3Hr1G087500.2 | Barley | cytosol | 41.67 | 37.07 |
| TraesCS3A01G352500.1 | Wheat | cytosol | 41.67 | 37.07 |
| TraesCS3B01G385100.1 | Wheat | cytosol | 41.44 | 36.87 |
| TraesCS3B01G603500.1 | Wheat | cytosol, mitochondrion | 43.47 | 36.69 |
| Zm00001d042973_P007 | Maize | cytosol | 41.22 | 36.09 |
| TraesCS3A01G538100.1 | Wheat | cytosol, mitochondrion | 43.02 | 35.97 |
| GSMUA_Achr11P... | Banana | mitochondrion | 36.26 | 34.85 |
| HORVU3Hr1G117830.2 | Barley | endoplasmic reticulum, extracellular | 44.37 | 33.73 |
| CDY17214 | Canola | cytosol, plastid | 20.05 | 33.58 |
| CDY27925 | Canola | plastid | 20.05 | 33.58 |
| CDY38525 | Canola | cytosol | 29.28 | 31.48 |
| CDY62768 | Canola | cytosol | 18.24 | 29.24 |
| CDY37387 | Canola | cytosol | 24.55 | 28.39 |
| Os05t0463300-00 | Rice | plasma membrane | 31.53 | 27.89 |
| CDY32322 | Canola | cytosol, plastid | 16.22 | 27.8 |
| CDX77034 | Canola | cytosol | 24.55 | 27.53 |
| CDY35313 | Canola | nucleus | 24.55 | 27.46 |
| CDY10618 | Canola | cytosol | 25.0 | 27.34 |
| HORVU1Hr1G071700.1 | Barley | nucleus | 31.08 | 26.85 |
| CDY24286 | Canola | cytosol | 24.32 | 26.73 |
| TraesCS1B01G297500.1 | Wheat | cytosol | 31.76 | 26.7 |
| TraesCS1A01G288100.2 | Wheat | nucleus | 31.31 | 26.68 |
| TraesCS1D01G287100.2 | Wheat | cytosol | 31.76 | 26.65 |
| CDX83237 | Canola | cytosol | 30.41 | 26.63 |
| CDY20099 | Canola | cytosol | 15.77 | 26.52 |
| CDX92933 | Canola | cytosol, plastid | 23.65 | 26.18 |
| CDX96427 | Canola | cytosol | 14.19 | 25.93 |
| OQU78148 | Sorghum | cytosol | 32.21 | 25.54 |
| CDY30433 | Canola | cytosol | 25.23 | 24.89 |
| CDX72935 | Canola | cytosol | 14.41 | 24.33 |
| CDX92931 | Canola | mitochondrion, nucleus | 13.96 | 24.31 |
| CDY23391 | Canola | cytosol | 25.23 | 24.3 |
| CDY15200 | Canola | nucleus | 27.93 | 24.27 |
| CDX71881 | Canola | nucleus | 26.8 | 24.09 |
| CDY05984 | Canola | nucleus | 26.8 | 24.04 |
| CDX90011 | Canola | nucleus | 27.48 | 24.02 |
| CDY05917 | Canola | mitochondrion, nucleus | 25.0 | 23.37 |
| CDY08120 | Canola | mitochondrion, nucleus | 24.77 | 23.21 |
| CDY39505 | Canola | cytosol | 20.5 | 23.04 |
| CDX86983 | Canola | nucleus | 24.55 | 22.95 |
| CDY58749 | Canola | cytosol | 23.42 | 22.81 |
| CDY00196 | Canola | nucleus | 24.1 | 22.53 |
| CDY08131 | Canola | nucleus | 17.34 | 22.38 |
| CDY05111 | Canola | nucleus | 21.62 | 22.38 |
| CDY48305 | Canola | nucleus | 18.69 | 22.13 |
| CDY26241 | Canola | nucleus | 18.69 | 22.13 |
| CDX90766 | Canola | nucleus | 21.4 | 22.04 |
| CDY69140 | Canola | mitochondrion, nucleus | 25.9 | 21.9 |
| CDX91859 | Canola | mitochondrion, nucleus | 25.9 | 21.7 |
| CDY24282 | Canola | mitochondrion | 14.86 | 21.64 |
| CDY05931 | Canola | nucleus | 17.12 | 21.59 |
| Zm00001d038395_P005 | Maize | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 30.41 | 20.77 |
| CDX79809 | Canola | nucleus | 27.93 | 20.74 |
| CDX83468 | Canola | plasma membrane | 25.45 | 20.51 |
| CDY66694 | Canola | nucleus | 27.48 | 20.37 |
| CDY05918 | Canola | mitochondrion | 14.19 | 20.06 |
| CDY44247 | Canola | nucleus | 25.0 | 19.96 |
| CDX96426 | Canola | nucleus, plastid | 3.6 | 15.69 |
| CDX72934 | Canola | nucleus, plastid | 3.38 | 14.71 |
Protein Annotations
| EnsemblPlants:CDY10410 | EnsemblPlantsGene:GSBRNA2T00032324001 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR000048 |
| InterPro:IQ_motif_EF-hand-BS | PANTHER:PTHR32295 | PANTHER:PTHR32295:SF28 | PFAM:PF00612 | PFscan:PS50096 | ProteinID:CDY10410 |
| ProteinID:CDY10410.1 | SEG:seg | SMART:SM00015 | UniParc:UPI0004EF4D7D | UniProt:A0A078F7C3 | MapMan:35.1 |
Description
BnaCnng03110DBnaCnng03110D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F7C3]
Coordinates
chrLK032003:+:324403..326658
Molecular Weight (calculated)
48866.9 Da
IEP (calculated)
11.115
GRAVY (calculated)
-0.852
Length
444 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKKAKWFSS VKKAFSPDSK KSKHKSPESP NGVISNLPPL TENARQSPPP PPPLEVRVAE VVAERNLNLS PPSTYATTTD VLVVPSSSSA PPPEVVVRPR
101: ARFAGKSNEE AAAILIQTVF RGYLAKRAIR AMRGLVRLKT LMEGSVVKRQ AANTLKCMQT LSRVQSQIRA RRIRMSEENQ ARQKQLLQKH AKELAGLKNG
201: DNWDDSIQSK EKVEANLLSK YEATMRRERA LAYAYTHQQN WKNNSKSGNP MFMDPSNPTW GWSWLERWMA GPGRPLEEPN NDNAASVKNL TQPNTPSSAR
301: GGTTPRNRNK NKYSFFSPPT PSRLNQSSRK SKEDDDAKST ISVLSERNRR HSIGGGSSLV RDDESMAGSQ ALPSYMVPTK SARARLKPQS PLSGSTTQEN
401: DGIADKASAK KRLSYTNSPA LPKPRRFSAP PKVESVAVTN GGGS
101: ARFAGKSNEE AAAILIQTVF RGYLAKRAIR AMRGLVRLKT LMEGSVVKRQ AANTLKCMQT LSRVQSQIRA RRIRMSEENQ ARQKQLLQKH AKELAGLKNG
201: DNWDDSIQSK EKVEANLLSK YEATMRRERA LAYAYTHQQN WKNNSKSGNP MFMDPSNPTW GWSWLERWMA GPGRPLEEPN NDNAASVKNL TQPNTPSSAR
301: GGTTPRNRNK NKYSFFSPPT PSRLNQSSRK SKEDDDAKST ISVLSERNRR HSIGGGSSLV RDDESMAGSQ ALPSYMVPTK SARARLKPQS PLSGSTTQEN
401: DGIADKASAK KRLSYTNSPA LPKPRRFSAP PKVESVAVTN GGGS
001: MGKKAKWFSS VKKAFSPDSK KSKQKLAEGQ NGVISNPPVV DNVRQSSSSP PPALAPREVR VAEVIVERNR DLSPPSTADA VNVTATDVPV VPSSSAPGVV
101: RRATPTRFAG KSNEEAAAIL IQTIFRGYLA RRALRAMRGL VRLKLLMEGS VVKRQAANTL KCMQTLSRVQ SQIRARRIRM SEENQARQKQ LLQKHAKELA
201: GLKNGDNWND SIQSKEKVEA NLLSKYEATM RRERALAYSY SHQQNWKNNS KSGNPMFMDP SNPTWGWSWL ERWMAGRPLE SSEKEQSNSN NDNAASVKGS
301: INRNEAAKSL TRNGSTQPNT PSSARGTPRN KNSFFSPPTP SRLNQSSRKS NDDDSKSTIS VLSERNRRHS IAGSSVRDDE SLAGSPALPS YMVPTKSARA
401: RLKPQSPLGG TTQENEGFTD KASAKKRLSY PTSPALPKPR RFSAPPKVES GGVTVTNGAG S
101: RRATPTRFAG KSNEEAAAIL IQTIFRGYLA RRALRAMRGL VRLKLLMEGS VVKRQAANTL KCMQTLSRVQ SQIRARRIRM SEENQARQKQ LLQKHAKELA
201: GLKNGDNWND SIQSKEKVEA NLLSKYEATM RRERALAYSY SHQQNWKNNS KSGNPMFMDP SNPTWGWSWL ERWMAGRPLE SSEKEQSNSN NDNAASVKGS
301: INRNEAAKSL TRNGSTQPNT PSSARGTPRN KNSFFSPPTP SRLNQSSRKS NDDDSKSTIS VLSERNRRHS IAGSSVRDDE SLAGSPALPS YMVPTKSARA
401: RLKPQSPLGG TTQENEGFTD KASAKKRLSY PTSPALPKPR RFSAPPKVES GGVTVTNGAG S
Arabidopsis Description
iqd2At5g03040/F15A17_70 [Source:UniProtKB/TrEMBL;Acc:Q93ZH7]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.