Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 2
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra028854.1-P | Field mustard | nucleus, plastid | 83.95 | 86.97 |
| CDY04876 | Canola | nucleus, plastid | 83.73 | 86.74 |
| CDY11238 | Canola | cytosol, plastid | 77.22 | 86.2 |
| CDY55696 | Canola | nucleus, plastid | 81.34 | 85.81 |
| CDX80849 | Canola | cytosol, plastid | 78.96 | 85.45 |
| CDY10410 | Canola | cytosol, plastid | 80.26 | 83.33 |
| Bra009554.1-P | Field mustard | cytosol | 76.57 | 74.95 |
| CDX70333 | Canola | cytosol | 77.66 | 74.58 |
| AT3G09710.2 | Thale cress | nucleus | 59.87 | 58.97 |
| KRG95941 | Soybean | nucleus | 53.58 | 51.78 |
| KRH67648 | Soybean | nucleus | 52.28 | 50.52 |
| KRH32420 | Soybean | cytosol | 50.76 | 49.37 |
| KRH19825 | Soybean | cytosol | 50.33 | 49.36 |
| PGSC0003DMT400004433 | Potato | cytosol | 51.19 | 49.17 |
| VIT_08s0040g02360.t01 | Wine grape | nucleus | 50.98 | 49.06 |
| Solyc10g084280.1.1 | Tomato | nucleus | 50.54 | 48.74 |
| PGSC0003DMT400027139 | Potato | cytosol | 50.76 | 48.65 |
| Solyc09g007410.2.1 | Tomato | cytosol | 50.76 | 48.45 |
| Solyc10g086060.1.1 | Tomato | cytosol | 49.46 | 48.41 |
| PGSC0003DMT400045333 | Potato | cytosol | 49.24 | 48.2 |
| GSMUA_Achr10P... | Banana | nucleus | 46.85 | 48.0 |
| GSMUA_Achr3P17820_001 | Banana | cytosol | 49.02 | 47.28 |
| Os05t0123200-01 | Rice | plasma membrane | 47.94 | 46.62 |
| KXG21175 | Sorghum | cytosol | 47.07 | 45.88 |
| TraesCS1A01G064100.1 | Wheat | cytosol | 47.72 | 45.83 |
| Zm00001d035492_P009 | Maize | cytosol | 47.29 | 45.8 |
| TraesCS1D01G064700.1 | Wheat | cytosol | 47.29 | 45.61 |
| HORVU1Hr1G013210.1 | Barley | cytosol | 47.72 | 45.45 |
| TraesCS1B01G082100.1 | Wheat | cytosol | 47.29 | 45.42 |
| Zm00001d010975_P003 | Maize | cytosol | 46.64 | 44.98 |
| AT3G52290.1 | Thale cress | cytosol | 41.65 | 44.65 |
| GSMUA_AchrUn_... | Banana | mitochondrion, nucleus | 42.3 | 42.48 |
| GSMUA_Achr7P22680_001 | Banana | cytosol | 42.73 | 42.37 |
| GSMUA_Achr10P... | Banana | cytosol | 38.61 | 42.18 |
| GSMUA_Achr7P18240_001 | Banana | cytosol | 42.95 | 41.95 |
| TraesCS3D01G543500.1 | Wheat | cytosol | 44.47 | 41.33 |
| Os01t0833800-01 | Rice | plasma membrane | 42.08 | 38.8 |
| TraesCS3D01G346500.1 | Wheat | cytosol | 41.65 | 38.48 |
| HORVU3Hr1G087500.2 | Barley | cytosol | 41.65 | 38.48 |
| TraesCS3A01G352500.1 | Wheat | cytosol | 41.65 | 38.48 |
| TraesCS3B01G603500.1 | Wheat | cytosol, mitochondrion | 43.82 | 38.4 |
| TraesCS3B01G385100.1 | Wheat | cytosol | 41.43 | 38.28 |
| TraesCS3A01G538100.1 | Wheat | cytosol, mitochondrion | 44.03 | 38.23 |
| KXG33651 | Sorghum | cytosol | 41.21 | 38.15 |
| GSMUA_Achr11P... | Banana | mitochondrion | 37.31 | 37.23 |
| Zm00001d042973_P007 | Maize | cytosol | 40.78 | 37.08 |
| HORVU3Hr1G117830.2 | Barley | endoplasmic reticulum, extracellular | 44.25 | 34.93 |
| AT2G33990.1 | Thale cress | cytosol | 19.31 | 33.84 |
| Os05t0463300-00 | Rice | plasma membrane | 30.8 | 28.29 |
| AT2G26180.1 | Thale cress | cytosol | 25.38 | 28.12 |
| TraesCS1D01G287100.2 | Wheat | cytosol | 31.89 | 27.79 |
| AT2G26410.2 | Thale cress | cytosol | 31.67 | 27.7 |
| TraesCS1A01G288100.2 | Wheat | nucleus | 30.8 | 27.26 |
| HORVU1Hr1G071700.1 | Barley | nucleus | 30.37 | 27.24 |
| AT3G15050.1 | Thale cress | plastid | 15.18 | 27.03 |
| TraesCS1B01G297500.1 | Wheat | cytosol | 30.8 | 26.89 |
| AT3G22190.2 | Thale cress | cytosol | 24.51 | 26.78 |
| OQU78148 | Sorghum | cytosol | 32.1 | 26.43 |
| AT4G10640.1 | Thale cress | nucleus | 22.34 | 24.35 |
| AT3G59690.2 | Thale cress | nucleus | 27.11 | 24.18 |
| AT3G49260.3 | Thale cress | nucleus | 24.73 | 24.15 |
| AT3G49380.1 | Thale cress | nucleus | 18.0 | 23.58 |
| AT4G00820.1 | Thale cress | mitochondrion, nucleus | 26.9 | 23.22 |
| AT1G72670.1 | Thale cress | cytosol | 20.82 | 23.19 |
| AT1G17480.1 | Thale cress | cytosol | 18.44 | 22.91 |
| AT1G01110.2 | Thale cress | nucleus | 25.6 | 22.39 |
| Zm00001d038395_P005 | Maize | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 30.8 | 21.85 |
| AT2G43680.1 | Thale cress | nucleus | 27.33 | 18.83 |
Protein Annotations
| MapMan:35.1 | EntrezGene:831696 | UniProt:A0A178UAZ3 | ProteinID:AED90548.1 | ProteinID:AED90549.1 | ProteinID:AED90550.1 |
| ArrayExpress:AT5G03040 | EnsemblPlantsGene:AT5G03040 | RefSeq:AT5G03040 | TAIR:AT5G03040 | RefSeq:AT5G03040-TAIR-G | EnsemblPlants:AT5G03040.1 |
| TAIR:AT5G03040.1 | EMBL:AY057527 | EMBL:AY143972 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0008150 | GO:GO:0016020 | InterPro:IPR000048 |
| InterPro:IQ_motif_EF-hand-BS | RefSeq:NP_001154693.1 | RefSeq:NP_001190211.1 | RefSeq:NP_568110.2 | ProteinID:OAO90819.1 | ProteinID:OAO91563.1 |
| PFAM:PF00612 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025281 | PFscan:PS50096 | PANTHER:PTHR32295 | PANTHER:PTHR32295:SF28 | UniProt:Q93ZH7 | SMART:SM00015 |
| UniParc:UPI00000AC3C3 | Symbol:iqd2 | SEG:seg | : | : | : |
Description
iqd2At5g03040/F15A17_70 [Source:UniProtKB/TrEMBL;Acc:Q93ZH7]
Coordinates
chr5:-:709948..713133
Molecular Weight (calculated)
50465.5 Da
IEP (calculated)
11.316
GRAVY (calculated)
-0.840
Length
461 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKKAKWFSS VKKAFSPDSK KSKQKLAEGQ NGVISNPPVV DNVRQSSSSP PPALAPREVR VAEVIVERNR DLSPPSTADA VNVTATDVPV VPSSSAPGVV
101: RRATPTRFAG KSNEEAAAIL IQTIFRGYLA RRALRAMRGL VRLKLLMEGS VVKRQAANTL KCMQTLSRVQ SQIRARRIRM SEENQARQKQ LLQKHAKELA
201: GLKNGDNWND SIQSKEKVEA NLLSKYEATM RRERALAYSY SHQQNWKNNS KSGNPMFMDP SNPTWGWSWL ERWMAGRPLE SSEKEQSNSN NDNAASVKGS
301: INRNEAAKSL TRNGSTQPNT PSSARGTPRN KNSFFSPPTP SRLNQSSRKS NDDDSKSTIS VLSERNRRHS IAGSSVRDDE SLAGSPALPS YMVPTKSARA
401: RLKPQSPLGG TTQENEGFTD KASAKKRLSY PTSPALPKPR RFSAPPKVES GGVTVTNGAG S
101: RRATPTRFAG KSNEEAAAIL IQTIFRGYLA RRALRAMRGL VRLKLLMEGS VVKRQAANTL KCMQTLSRVQ SQIRARRIRM SEENQARQKQ LLQKHAKELA
201: GLKNGDNWND SIQSKEKVEA NLLSKYEATM RRERALAYSY SHQQNWKNNS KSGNPMFMDP SNPTWGWSWL ERWMAGRPLE SSEKEQSNSN NDNAASVKGS
301: INRNEAAKSL TRNGSTQPNT PSSARGTPRN KNSFFSPPTP SRLNQSSRKS NDDDSKSTIS VLSERNRRHS IAGSSVRDDE SLAGSPALPS YMVPTKSARA
401: RLKPQSPLGG TTQENEGFTD KASAKKRLSY PTSPALPKPR RFSAPPKVES GGVTVTNGAG S
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.