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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 2
  • mitochondrion 1
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS4A01G206200.2
TraesCS4B01G109800.2
TraesCS4D01G107200.1
TraesCS5A01G107900.1
TraesCS5B01G115400.1
TraesCS5D01G122800.1
TraesCS6A01G274500.1
TraesCS6B01G302000.1
TraesCS6D01G254800.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G03040.1 TraesCS6A01G274500.1 AT3G27960.1 21798944
AT5G03040.1 TraesCS6B01G302000.1 AT3G27960.1 21798944
AT5G03040.1 TraesCS6D01G254800.1 AT3G27960.1 21798944
AT5G03040.1 TraesCS4A01G206200.2 AT4G09570.1 19130088
AT5G03040.1 TraesCS4B01G109800.2 AT4G09570.1 19130088
AT5G03040.1 TraesCS4D01G107200.1 AT4G09570.1 19130088
AT5G03040.1 TraesCS5A01G107900.1 AT4G09570.1 19130088
AT5G03040.1 TraesCS5B01G115400.1 AT4G09570.1 19130088
AT5G03040.1 TraesCS5D01G122800.1 AT4G09570.1 19130088
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS1A01G288100.2 Wheat nucleus 93.19 94.63
TraesCS1B01G297500.1 Wheat cytosol 91.68 91.86
HORVU1Hr1G071700.1 Barley nucleus 81.47 83.85
Os05t0463300-00 Rice plasma membrane 48.39 51.0
OQU78148 Sorghum cytosol 46.5 43.93
TraesCS3D01G346500.1 Wheat cytosol 39.13 41.48
Zm00001d038395_P005 Maize cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 45.94 37.38
VIT_08s0040g02360.t01 Wine grape nucleus 33.08 36.53
PGSC0003DMT400004433 Potato cytosol 32.89 36.25
Solyc09g007410.2.1 Tomato cytosol 32.89 36.02
KRG95941 Soybean nucleus 32.33 35.85
GSMUA_AchrUn_... Banana mitochondrion, nucleus 30.81 35.51
KRH67648 Soybean nucleus 31.76 35.22
Solyc10g084280.1.1 Tomato nucleus 31.76 35.15
PGSC0003DMT400027139 Potato cytosol 31.95 35.14
KRH19825 Soybean cytosol 31.19 35.11
GSMUA_Achr7P22680_001 Banana cytosol 30.81 35.05
KRH32420 Soybean cytosol 31.19 34.81
CDY11238 Canola cytosol, plastid 26.84 34.38
TraesCS1D01G064700.1 Wheat cytosol 30.81 34.1
PGSC0003DMT400045333 Potato cytosol 30.25 33.97
GSMUA_Achr10P... Banana cytosol 27.03 33.89
Solyc10g086060.1.1 Tomato cytosol 29.49 33.12
CDX80849 Canola cytosol, plastid 26.65 33.1
CDY04876 Canola nucleus, plastid 27.22 32.36
CDY55696 Canola nucleus, plastid 26.46 32.04
Bra028854.1-P Field mustard nucleus, plastid 26.84 31.91
AT5G03040.1 Thale cress cytosol, plastid 27.79 31.89
CDY10410 Canola cytosol, plastid 26.65 31.76
GSMUA_Achr11P... Banana mitochondrion 26.84 30.74
TraesCS3D01G543500.1 Wheat cytosol 28.17 30.04
CDX70333 Canola cytosol 26.28 28.96
Bra009554.1-P Field mustard cytosol 25.71 28.87
AT3G09710.2 Thale cress nucleus 23.44 26.5
Bra034081.1-P Field mustard nucleus 21.36 25.45
Bra001299.1-P Field mustard nucleus 20.79 23.26
CDX73992 Canola nucleus 20.6 22.85
TraesCS3D01G251800.2 Wheat cytosol 18.9 22.57
CDY07937 Canola nucleus 20.04 22.18
TraesCS3D01G107700.1 Wheat cytosol 17.96 21.84
TraesCS7D01G107600.2 Wheat nucleus 13.42 21.71
CDY22198 Canola cytosol 22.5 21.29
TraesCS1D01G367300.2 Wheat mitochondrion, plastid 17.77 20.84
CDY41307 Canola cytosol 21.36 20.66
TraesCS5D01G037300.2 Wheat nucleus 16.26 20.0
TraesCS5D01G382500.1 Wheat nucleus 15.5 18.72
TraesCS3D01G392900.1 Wheat cytosol 19.66 16.72
Protein Annotations
EnsemblPlants:TraesCS1D01G287100.2EnsemblPlantsGene:TraesCS1D01G287100GO:GO:0003674GO:GO:0005488GO:GO:0005515InterPro:IPR000048
InterPro:IQ_motif_EF-hand-BSPANTHER:PTHR32295PANTHER:PTHR32295:SF6PFAM:PF00612PFscan:PS50096SEG:seg
SMART:SM00015MapMan:35.1::::
Description
No Description!
Coordinates
chr1D:-:385615809..385617839
Molecular Weight (calculated)
56887.8 Da
IEP (calculated)
11.226
GRAVY (calculated)
-0.914
Length
529 amino acids
Sequence
(BLAST)
001: MGKKVRWFDA VQRILSPSEP DRDEKEDKQK PAERPTSKSS FKKLWQFGKS STSTSSSSAA PEAAPAAHQQ PPPQPDQQDA VEVKSAGTTS EQNDGGLQVA
101: ALAAPVAQQQ PAAATAVVTP RPPARSKEEL AAIRIQTACR GYLVRKGYKA RAQARLMSLL EGVAVKRQTE DALYSMQAMT RVQTQIYARR VNKDKALKSQ
201: AQPKQGPDKT KIGEVWDHTH QSKEQIEATL ATKQEAASRR QRALSYALSH QWRNRSPSSS SSSGRGRATP TLSHPPTFMD PGCPNWGWSW AERCMAASRP
301: WESQTAPPDV KDRAAPGKSA GRAASPRVSI SVQIPTTLTG RSARPAGRSS PSTPTQSRSP SALGKTVASP RRAPSPRGSP FNKSGSMLSE RPRSSQEHLA
401: ASSGGGGDEK EASLRRTTSL RSGEQPRKLS LGTREADAGE TGDAPVTPSY MQATKSVKAK ARCASPAAAD KAELPERAPL VSSPSMKRRP SPEFAEKQGV
501: SSPRTPRTPS TPSKAKPEIR TKRPPSPRL
Best Arabidopsis Sequence Match ( AT5G03040.1 )
(BLAST)
001: MGKKAKWFSS VKKAFSPDSK KSKQKLAEGQ NGVISNPPVV DNVRQSSSSP PPALAPREVR VAEVIVERNR DLSPPSTADA VNVTATDVPV VPSSSAPGVV
101: RRATPTRFAG KSNEEAAAIL IQTIFRGYLA RRALRAMRGL VRLKLLMEGS VVKRQAANTL KCMQTLSRVQ SQIRARRIRM SEENQARQKQ LLQKHAKELA
201: GLKNGDNWND SIQSKEKVEA NLLSKYEATM RRERALAYSY SHQQNWKNNS KSGNPMFMDP SNPTWGWSWL ERWMAGRPLE SSEKEQSNSN NDNAASVKGS
301: INRNEAAKSL TRNGSTQPNT PSSARGTPRN KNSFFSPPTP SRLNQSSRKS NDDDSKSTIS VLSERNRRHS IAGSSVRDDE SLAGSPALPS YMVPTKSARA
401: RLKPQSPLGG TTQENEGFTD KASAKKRLSY PTSPALPKPR RFSAPPKVES GGVTVTNGAG S
Arabidopsis Description
iqd2At5g03040/F15A17_70 [Source:UniProtKB/TrEMBL;Acc:Q93ZH7]
SUBAcon: [plastid,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.