Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G03040.1 | KRG93305 | AT3G27960.1 | 21798944 |
| AT5G03040.1 | KRH56614 | AT3G27960.1 | 21798944 |
| AT5G03040.1 | KRG91803 | AT4G09570.1 | 19130088 |
| AT5G03040.1 | KRH34983 | AT4G09570.1 | 19130088 |
| AT5G03040.1 | KRH34984 | AT4G09570.1 | 19130088 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG95941 | Soybean | nucleus | 95.39 | 95.39 |
| KRH19825 | Soybean | cytosol | 71.07 | 72.13 |
| KRH32420 | Soybean | cytosol | 71.07 | 71.52 |
| VIT_08s0040g02360.t01 | Wine grape | nucleus | 64.15 | 63.88 |
| Solyc09g007410.2.1 | Tomato | cytosol | 62.05 | 61.28 |
| PGSC0003DMT400004433 | Potato | cytosol | 61.64 | 61.25 |
| Solyc10g084280.1.1 | Tomato | nucleus | 59.33 | 59.2 |
| PGSC0003DMT400027139 | Potato | cytosol | 59.33 | 58.84 |
| PGSC0003DMT400045333 | Potato | cytosol | 57.86 | 58.6 |
| Solyc10g086060.1.1 | Tomato | cytosol | 57.65 | 58.39 |
| GSMUA_Achr10P... | Banana | nucleus | 54.3 | 57.56 |
| GSMUA_Achr3P17820_001 | Banana | cytosol | 55.56 | 55.44 |
| CDY11238 | Canola | cytosol, plastid | 47.59 | 54.96 |
| KRH57858 | Soybean | cytosol | 52.2 | 54.85 |
| CDX80849 | Canola | cytosol, plastid | 48.01 | 53.76 |
| KXG21175 | Sorghum | cytosol | 53.04 | 53.49 |
| Os05t0123200-01 | Rice | plasma membrane | 53.04 | 53.38 |
| TraesCS1A01G064100.1 | Wheat | cytosol | 53.04 | 52.71 |
| CDY55696 | Canola | nucleus, plastid | 48.22 | 52.63 |
| CDY04876 | Canola | nucleus, plastid | 48.85 | 52.36 |
| Zm00001d035492_P009 | Maize | cytosol | 52.2 | 52.31 |
| Zm00001d010975_P003 | Maize | cytosol | 52.41 | 52.3 |
| AT5G03040.1 | Thale cress | cytosol, plastid | 50.52 | 52.28 |
| HORVU1Hr1G013210.1 | Barley | cytosol | 53.04 | 52.27 |
| Bra028854.1-P | Field mustard | nucleus, plastid | 48.64 | 52.13 |
| TraesCS1D01G064700.1 | Wheat | cytosol | 52.2 | 52.09 |
| TraesCS1B01G082100.1 | Wheat | cytosol | 52.41 | 52.08 |
| KRH04761 | Soybean | cytosol | 52.41 | 51.76 |
| CDY10410 | Canola | cytosol, plastid | 47.59 | 51.13 |
| GSMUA_AchrUn_... | Banana | mitochondrion, nucleus | 48.64 | 50.54 |
| GSMUA_Achr7P22680_001 | Banana | cytosol | 48.22 | 49.46 |
| GSMUA_Achr7P18240_001 | Banana | cytosol | 47.59 | 48.09 |
| Bra009554.1-P | Field mustard | cytosol | 46.54 | 47.13 |
| CDX70333 | Canola | cytosol | 47.38 | 47.08 |
| TraesCS3D01G543500.1 | Wheat | cytosol | 48.64 | 46.77 |
| GSMUA_Achr10P... | Banana | cytosol | 41.3 | 46.68 |
| Os01t0833800-01 | Rice | plasma membrane | 48.01 | 45.8 |
| AT3G09710.2 | Thale cress | nucleus | 44.86 | 45.73 |
| Bra034081.1-P | Field mustard | nucleus | 41.3 | 44.37 |
| TraesCS3B01G603500.1 | Wheat | cytosol, mitochondrion | 48.85 | 44.3 |
| TraesCS3B01G385100.1 | Wheat | cytosol | 46.33 | 44.29 |
| TraesCS3D01G346500.1 | Wheat | cytosol | 46.12 | 44.09 |
| TraesCS3A01G352500.1 | Wheat | cytosol | 46.12 | 44.09 |
| HORVU3Hr1G087500.2 | Barley | cytosol | 46.12 | 44.09 |
| KRG91856 | Soybean | cytosol | 45.07 | 43.97 |
| GSMUA_Achr11P... | Banana | mitochondrion | 42.35 | 43.72 |
| KRH34906 | Soybean | cytosol | 44.23 | 43.69 |
| KXG33651 | Sorghum | cytosol | 45.07 | 43.17 |
| TraesCS3A01G538100.1 | Wheat | cytosol, mitochondrion | 47.8 | 42.94 |
| Zm00001d042973_P007 | Maize | cytosol | 45.07 | 42.41 |
| Bra001299.1-P | Field mustard | nucleus | 39.41 | 39.75 |
| HORVU3Hr1G117830.2 | Barley | endoplasmic reticulum, extracellular | 48.64 | 39.73 |
| CDX73992 | Canola | nucleus | 38.78 | 38.78 |
| CDY07937 | Canola | nucleus | 37.95 | 37.87 |
| CDY41307 | Canola | cytosol | 41.51 | 36.2 |
| CDY22198 | Canola | cytosol | 41.72 | 35.6 |
| KRH20344 | Soybean | cytosol | 21.38 | 34.34 |
| KRH50151 | Soybean | cytosol | 20.75 | 34.14 |
| KRH21320 | Soybean | cytosol | 21.38 | 34.11 |
| KRH32840 | Soybean | mitochondrion, nucleus | 9.43 | 34.09 |
| KRH10977 | Soybean | cytosol | 21.38 | 33.12 |
| TraesCS1D01G287100.2 | Wheat | cytosol | 35.22 | 31.76 |
| HORVU1Hr1G071700.1 | Barley | nucleus | 33.96 | 31.52 |
| TraesCS1A01G288100.2 | Wheat | nucleus | 33.96 | 31.09 |
| Os05t0463300-00 | Rice | plasma membrane | 32.7 | 31.08 |
| TraesCS1B01G297500.1 | Wheat | cytosol | 33.33 | 30.11 |
| KRH22612 | Soybean | cytosol | 26.21 | 29.41 |
| KRH26707 | Soybean | cytosol | 26.0 | 29.38 |
| KRH05433 | Soybean | cytosol | 25.37 | 29.3 |
| KRH27315 | Soybean | cytosol | 18.03 | 29.25 |
| KRH15576 | Soybean | cytosol | 25.37 | 29.02 |
| OQU78148 | Sorghum | cytosol | 33.96 | 28.93 |
| KRH71267 | Soybean | cytosol | 32.29 | 28.79 |
| KRH16503 | Soybean | cytosol, endoplasmic reticulum, mitochondrion, nucleus | 27.46 | 28.6 |
| KRH64435 | Soybean | nucleus | 27.67 | 28.51 |
| KRH39086 | Soybean | cytosol | 25.79 | 28.34 |
| KRH50198 | Soybean | cytosol | 31.66 | 28.33 |
| KRH55128 | Soybean | mitochondrion, nucleus | 17.4 | 28.04 |
| KRH53505 | Soybean | cytosol | 26.21 | 28.03 |
| KRH61522 | Soybean | cytosol | 25.58 | 27.11 |
| KRH37691 | Soybean | mitochondrion | 10.27 | 27.07 |
| KRH52206 | Soybean | cytosol | 25.37 | 26.89 |
| KRH22000 | Soybean | plastid | 18.66 | 25.95 |
| KRH47821 | Soybean | nucleus | 29.14 | 25.46 |
| KRH06386 | Soybean | mitochondrion, nucleus | 29.14 | 25.27 |
| KRH10035 | Soybean | cytosol | 21.8 | 25.0 |
| KRH23285 | Soybean | nucleus | 21.59 | 25.0 |
| Zm00001d038395_P005 | Maize | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 32.29 | 23.69 |
| KRH44124 | Soybean | mitochondrion | 20.75 | 23.52 |
| KRH47099 | Soybean | cytosol | 21.38 | 22.13 |
Protein Annotations
| EntrezGene:100777223 | MapMan:35.1 | EMBL:ACUP02002069 | InterPro:DUF4005 | EnsemblPlantsGene:GLYMA_03G178200 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | UniProt:I1JPJ6 | InterPro:IPR000048 | InterPro:IQ_motif_EF-hand-BS | ProteinID:KRH67646.1 |
| ProteinID:KRH67647.1 | EnsemblPlants:KRH67648 | ProteinID:KRH67648 | ProteinID:KRH67648.1 | PFAM:PF00612 | PFAM:PF13178 |
| PFscan:PS50096 | PANTHER:PTHR32295 | PANTHER:PTHR32295:SF28 | SMART:SM00015 | UniParc:UPI000233A925 | SEG:seg |
Description
hypothetical protein
Coordinates
chr3:-:39080004..39084273
Molecular Weight (calculated)
53333.2 Da
IEP (calculated)
10.688
GRAVY (calculated)
-0.817
Length
477 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRKGNWFSS VMKALSPDSK EKKEQKSSKS KKKWFGKQKL ETSVSYSEAH KAPPPPRPIP PPEAIKLTDI ENEISHDHDY VVEVATAMDA EEPVPSVQIE
101: PVRVEAAPIA HYAGKPKDEV AAIKIQTAFR GYLARRALRA LRGLVRLKLL MEGPVVKRQA TSTLHSMQTL SRLQSQIRSR RIRMLEENQA LQRQLLQKHA
201: RELESLRMGE EWDDSLQSKE QIEAKLLSKY EATTRRERAL AYAFTHQQNW KNSSRSVNPM FMDPTNPSWG WSWLERWMAA RPWESRSHMD KELNDHSSVR
301: SSSRSITGGE ISKSFARFQL NLEKHSPTAC QNPGSPSFQS TPSKPASISA KKPKKVSPSP RGSWVTDEDS KSLVSVQSDR FRRHSIAGSL VRDDESLASS
401: PAVPSYMVPT QSAKAKSRTQ SPLAPENGKA EKGSFGSAKK RLSFPASPAR PRRHSGPPKV ESSSLNAELA VDKGVDS
101: PVRVEAAPIA HYAGKPKDEV AAIKIQTAFR GYLARRALRA LRGLVRLKLL MEGPVVKRQA TSTLHSMQTL SRLQSQIRSR RIRMLEENQA LQRQLLQKHA
201: RELESLRMGE EWDDSLQSKE QIEAKLLSKY EATTRRERAL AYAFTHQQNW KNSSRSVNPM FMDPTNPSWG WSWLERWMAA RPWESRSHMD KELNDHSSVR
301: SSSRSITGGE ISKSFARFQL NLEKHSPTAC QNPGSPSFQS TPSKPASISA KKPKKVSPSP RGSWVTDEDS KSLVSVQSDR FRRHSIAGSL VRDDESLASS
401: PAVPSYMVPT QSAKAKSRTQ SPLAPENGKA EKGSFGSAKK RLSFPASPAR PRRHSGPPKV ESSSLNAELA VDKGVDS
001: MVKKAKWLKN VKKAFSPDSK KLKHESVECQ DSVISYPVLI ATSRSSSPQF EVRVDEVNYE QKKNLYPPSS DSVTATVAHV LVDSPPSSPE SVHQAIVVNR
101: FAGKSKEEAA AILIQSTFRG HLARRESQVM RGQERLKLLM EGSVVQRQAA ITLKCMQTLS RVQSQIRSRR IRMSEENQAR HKQLLQKHAK ELGGLKNGGN
201: WNYSNQSKEQ VEAGMLHKYE ATMRRERALA YAFTHQQNLK SFSKTANPMF MDPSNPTWGW SWLERWMAGR PWESSEKEQN TTNNDNSSVK NSTNRNSQGG
301: ETAKSSNRNK LNSSTKPNTP SASSTATRNP RKKRPIPSSI KSKSSDDEAK SSERNRRPSI ARPSVSDDET LSSSTARRSS NLIPTTKSAR GKPKSQTSSR
401: VAVTTSTTEE SSILPEKAPA KKRLSTSASP APKPRRSSAP PKVEKGVLKA ERTP
101: FAGKSKEEAA AILIQSTFRG HLARRESQVM RGQERLKLLM EGSVVQRQAA ITLKCMQTLS RVQSQIRSRR IRMSEENQAR HKQLLQKHAK ELGGLKNGGN
201: WNYSNQSKEQ VEAGMLHKYE ATMRRERALA YAFTHQQNLK SFSKTANPMF MDPSNPTWGW SWLERWMAGR PWESSEKEQN TTNNDNSSVK NSTNRNSQGG
301: ETAKSSNRNK LNSSTKPNTP SASSTATRNP RKKRPIPSSI KSKSSDDEAK SSERNRRPSI ARPSVSDDET LSSSTARRSS NLIPTTKSAR GKPKSQTSSR
401: VAVTTSTTEE SSILPEKAPA KKRLSTSASP APKPRRSSAP PKVEKGVLKA ERTP
Arabidopsis Description
IQD1IQ-domain 1 [Source:UniProtKB/TrEMBL;Acc:F4J1A4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.