CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH53505	Soybean	cytosol	87.47	90.81
KRH16503	Soybean	cytosol, endoplasmic reticulum, mitochondrion, nucleus	65.66	66.38
PGSC0003DMT400023467	Potato	nucleus	57.45	56.72
VIT_16s0098g01790.t01	Wine grape	cytosol, endoplasmic reticulum, nucleus	56.59	56.71
Solyc03g083100.2.1	Tomato	nucleus	56.16	55.44
AT3G49260.3	Thale cress	nucleus	50.97	50.0
PGSC0003DMT400050471	Potato	cytosol	43.41	49.39
CDY05917	Canola	mitochondrion, nucleus	49.03	47.79
Bra017997.1-P	Field mustard	nucleus, plastid	48.81	47.58
Solyc06g052010.1.1	Tomato	cytosol	40.6	47.36
CDY08120	Canola	mitochondrion, nucleus	47.3	46.2
CDX86983	Canola	nucleus	46.87	45.68
Bra019589.1-P	Field mustard	nucleus	46.65	45.47
GSMUA_Achr10P...	Banana	cytosol	44.28	45.35
CDY00196	Canola	nucleus	46.22	45.05
CDY05918	Canola	mitochondrion	26.13	38.53
KRH57858	Soybean	cytosol	29.59	30.18
KRH04761	Soybean	cytosol	30.67	29.4
KRG95941	Soybean	nucleus	28.94	28.09
KRH67648	Soybean	nucleus	28.51	27.67
KRH61522	Soybean	cytosol	26.35	27.11
KRH47821	Soybean	nucleus	31.75	26.92
KRH05433	Soybean	cytosol	23.97	26.88
KRH19825	Soybean	cytosol	27.21	26.81
KRH32420	Soybean	cytosol	27.43	26.79
KRH26707	Soybean	cytosol	24.41	26.78
KRH52206	Soybean	cytosol	25.92	26.67
KRH22612	Soybean	cytosol	24.41	26.59
KRH06386	Soybean	mitochondrion, nucleus	31.53	26.55
KRH15576	Soybean	cytosol	23.54	26.14
KRH32840	Soybean	mitochondrion, nucleus	7.34	25.76
KRH20344	Soybean	cytosol	16.41	25.59
KRH50151	Soybean	cytosol	15.98	25.52
KRH21320	Soybean	cytosol	16.41	25.42
KRH44124	Soybean	mitochondrion	22.03	24.23
KRH39086	Soybean	cytosol	22.68	24.19
KRH10035	Soybean	cytosol	21.6	24.04
KRH10977	Soybean	cytosol	15.98	24.03
KRH34906	Soybean	cytosol	24.62	23.6
KRH23285	Soybean	nucleus	20.95	23.54
KRH27315	Soybean	cytosol	14.69	23.13
KRH55128	Soybean	mitochondrion, nucleus	14.69	22.97
KRH47099	Soybean	cytosol	22.68	22.78
KRG91856	Soybean	cytosol	23.97	22.7
KRH50198	Soybean	cytosol	25.05	21.76
KRH71267	Soybean	cytosol	24.62	21.31
KRH37691	Soybean	mitochondrion	7.78	19.89
KRH22000	Soybean	plastid	14.04	18.95

Protein Annotations

Gene3D:1.20.5.190	EntrezGene:100808965	MapMan:35.1	EMBL:ACUP02002765	InterPro:DUF4005	EnsemblPlantsGene:GLYMA_04G235400
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	UniProt:K7KLX1
EnsemblPlants:KRH64435	ProteinID:KRH64435	ProteinID:KRH64435.1	ProteinID:KRH64436.1	PFAM:PF00612	PFAM:PF13178
PFscan:PS50096	PANTHER:PTHR32295	PANTHER:PTHR32295:SF33	SMART:SM00015	UniParc:UPI00023C01C2	SEG:seg

Description

hypothetical protein

Coordinates

chr4:-:50351730..50355651

Molecular Weight (calculated)

51741.8 Da

IEP (calculated)

10.142

GRAVY (calculated)

-0.803

Length

463 amino acids

Sequence
(BLAST)

001: MGKKGGSWFS SVKKVFKSSS SKDSPLPEKK KENNKEEQWQ HVAPEEVSVE HFPAESSPDL TNEGSVTSST PVTEDTNPAV AFAAATAAAA EAAVAAAQAA
101: ARVVRLAGYG RQSKEERAAI LIQSYYRGYL ARRALRALKG LVRLQALVRG HNVRKQAQMT MRCMHALVRV QTRVRARRLE LTEEKLQRRV YEEKVQREVD
201: EPKQFLSPIK MLDMDGWDSR RQTSQQIKDN DLRKHEAVMK RERALAYAFN CQQQLKQHMH IDPNGDDIGS YSTERERAQL DWNWLERWMS SQSPNLRPRE
301: TLYRTLATAT STTDDMSEEK TVEMDMGATL DSTHANMGFI NGESFDTSPI SNRYHQRHHS AGVPSYMAPT QSAKAKVRSQ GPFKQRGSPG PHWNSSTRRG
401: SSVGLGCDSS SSGGPTAAHV FPRSPNPKIN EIRLQSRRIS GGSPDNVHIE DWALPLGATN GWA

Best Arabidopsis Sequence Match ( AT3G49260.1 )
(BLAST)

001: MGKKGSGGWF STVKKKVFKS SPKDSKRENN IGSNNADIWQ QQHDTQEVVS FEHFPAESSP EISHDVESTA STPATNVGDR KHAMAVAIAT AAAAEAAVAA
101: AQAAAKVVRL AGYNRQTEED SAAVLIQSHY RGYLARRALR ALKGLVRLQA LVRGNHVRKQ AQMTMKCMQA LVRVQGRVRA RRLQVAHDRF KKQFEEEEKR
201: SGMEKPNKGF ANLKTEREKP KKLHEVNRTS LYQTQGKEKE RSEGMMKRER ALAYAYTYQR QMQHTNSEEG IGLSSNGPDR NQWAWNWLDH WMSSQPYTGR
301: QTGPGPGPGQ YNPPPYPPFP TAAATTTSDD VSEKTVEMDV TTPTSLKGNI IGLIDREYID LGSYRQGHKQ RKSPTHIPSY MAPTASAKAK VRDQGPTVKL
401: QGTSFMPYWN SSTKNGSVNG SGCDSSSSGG AITTGYPGPR SPNPKSDIRR KPVSPSQSPT GFGKRGWRHD H

Arabidopsis Description

iqd21IQ-domain 21 [Source:UniProtKB/TrEMBL;Acc:F4IWT1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.