Factsheet for Bra019589.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
plastid 1
vacuole 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY00196	Canola	nucleus	99.16	99.16
Bra017997.1-P	Field mustard	nucleus, plastid	84.21	84.21
AT3G49260.3	Thale cress	nucleus	83.16	83.69
KRH53505	Soybean	cytosol	45.47	48.43
VIT_16s0098g01790.t01	Wine grape	cytosol, endoplasmic reticulum, nucleus	46.74	48.05
KRH64435	Soybean	nucleus	45.47	46.65
KRH16503	Soybean	cytosol, endoplasmic reticulum, mitochondrion, nucleus	43.58	45.2
Solyc03g083100.2.1	Tomato	nucleus	43.79	44.35
PGSC0003DMT400023467	Potato	nucleus	43.79	44.35
Solyc06g052010.1.1	Tomato	cytosol	34.53	41.31
PGSC0003DMT400050471	Potato	cytosol	34.32	40.05
GSMUA_Achr10P...	Banana	cytosol	37.05	38.94
Bra034294.1-P	Field mustard	nucleus	21.89	26.2
Bra028854.1-P	Field mustard	nucleus, plastid	24.42	26.07
Bra033443.1-P	Field mustard	cytosol	24.42	26.07
Bra031331.1-P	Field mustard	cytosol	20.42	25.26
Bra001855.1-P	Field mustard	cytosol	18.11	25.07
Bra005462.1-P	Field mustard	cytosol, plastid	13.26	23.77
Bra025971.1-P	Field mustard	nucleus	18.53	23.47
Bra017988.1-P	Field mustard	nucleus	17.26	23.43
Bra016042.1-P	Field mustard	cytosol	20.21	23.3
Bra021888.1-P	Field mustard	plastid	12.63	23.17
Bra009554.1-P	Field mustard	cytosol	22.32	22.51
Bra033284.1-P	Field mustard	nucleus	23.16	20.91
Bra000717.1-P	Field mustard	nucleus	18.95	20.83
Bra007471.1-P	Field mustard	nucleus	21.68	20.77
Bra000930.1-P	Field mustard	mitochondrion, nucleus	22.95	20.76
Bra021588.1-P	Field mustard	cytosol, plastid	11.37	20.45
Bra023846.1-P	Field mustard	cytosol	17.47	19.9
Bra034081.1-P	Field mustard	nucleus	17.26	18.47
Bra037689.1-P	Field mustard	cytosol	19.37	17.46
Bra000318.1-P	Field mustard	nucleus	20.21	16.13
Bra004776.1-P	Field mustard	nucleus	20.42	15.52
Bra001299.1-P	Field mustard	nucleus	15.37	15.43

Protein Annotations

EnsemblPlants:Bra019589.1	EnsemblPlants:Bra019589.1-P	EnsemblPlantsGene:Bra019589	Gene3D:1.20.5.190	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:DUF4005	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR32295	PANTHER:PTHR32295:SF33
PFAM:PF00612	PFAM:PF13178	PFscan:PS50096	SEG:seg	SMART:SM00015	UniParc:UPI000253EF7D
UniProt:M4DSU6	MapMan:35.2	:	:	:	:

Description

AT3G49260 (E=4e-149) iqd21 | iqd21 (IQ-domain 21); calmodulin binding

Coordinates

chrA06:-:11925617..11929756

Molecular Weight (calculated)

52975.4 Da

IEP (calculated)

10.472

GRAVY (calculated)

-0.934

Length

475 amino acids

Sequence
(BLAST)

001: MGKKGNGGWF STVKKKVFKS SPKDSKRENN ISNSDANRWQ QQNDTQEVVS FEKFPEESSP EISHDVESIA STPAPAVGER KHAMAMATED AAKAAVAAAE
101: AAAKVVRLAG YNRLTEEDTA AVLIQSHYRG YLARRALRAL KGLVRLQALV RGNHVRKQAQ MTMKCMQALV RVQGRVRARR LRVAHDRFKK QFEEEESRFM
201: KEKSNKGSAN VQTEREKKKK LHEVNETSLY QTPGKGKEKT QEMMERERAL AYAYTYQRQM QHTNDGDAIR FSVNGPDRSQ LDWNWLDHWM SSRPYTGRQT
301: VPGSSPGPGQ YNPPPYPPFP TAAATTAGNT TPDDVSEKTV EMDATTPTSL KDRIIGLIDR EYIELGTYRQ AHKQRKSPTR IPSYMAPTAS AKAKVRDQGT
401: TVKLQGTSFI PNWNSSTKQG SINGSGCGSS SSCGEVITGY PGLRSPNPKT DIRRKPVSPS QSPTGYGKRG WRHDH

Best Arabidopsis Sequence Match ( AT3G49260.1 )
(BLAST)

001: MGKKGSGGWF STVKKKVFKS SPKDSKRENN IGSNNADIWQ QQHDTQEVVS FEHFPAESSP EISHDVESTA STPATNVGDR KHAMAVAIAT AAAAEAAVAA
101: AQAAAKVVRL AGYNRQTEED SAAVLIQSHY RGYLARRALR ALKGLVRLQA LVRGNHVRKQ AQMTMKCMQA LVRVQGRVRA RRLQVAHDRF KKQFEEEEKR
201: SGMEKPNKGF ANLKTEREKP KKLHEVNRTS LYQTQGKEKE RSEGMMKRER ALAYAYTYQR QMQHTNSEEG IGLSSNGPDR NQWAWNWLDH WMSSQPYTGR
301: QTGPGPGPGQ YNPPPYPPFP TAAATTTSDD VSEKTVEMDV TTPTSLKGNI IGLIDREYID LGSYRQGHKQ RKSPTHIPSY MAPTASAKAK VRDQGPTVKL
401: QGTSFMPYWN SSTKNGSVNG SGCDSSSSGG AITTGYPGPR SPNPKSDIRR KPVSPSQSPT GFGKRGWRHD H

Arabidopsis Description

iqd21IQ-domain 21 [Source:UniProtKB/TrEMBL;Acc:F4IWT1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.